RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 BHMT2Q9H2M3 363 aa19.32■□□□□ 0.68
CDC42EP3-201ENST00000295324 PPP1R2P3Q6NXS1 205 aa19.32■□□□□ 0.68
CDC42EP3-201ENST00000295324 KLHL7Q8IXQ5 586 aa19.32■□□□□ 0.68
CDC42EP3-201ENST00000295324 FAM20AQ96MK3 541 aa19.32■□□□□ 0.68
CDC42EP3-201ENST00000295324 AIFM3Q96NN9 605 aa19.32■□□□□ 0.68
CDC42EP3-201ENST00000295324 IFT122Q9HBG6 1241 aa19.32■□□□□ 0.68
CDC42EP3-201ENST00000295324 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.32■□□□□ 0.68
CDC42EP3-201ENST00000295324 TYW5A2RUC4 315 aaKnown RBP19.32■□□□□ 0.68
CDC42EP3-201ENST00000295324 PSMB7Q99436 277 aa19.32■□□□□ 0.68
CDC42EP3-201ENST00000295324 PPANQ9NQ55 473 aaKnown RBP19.32■□□□□ 0.68
CDC42EP3-201ENST00000295324 SH3BP5O60239 455 aa19.32■□□□□ 0.68
CDC42EP3-201ENST00000295324 DPEP1P16444 411 aa19.32■□□□□ 0.68
CDC42EP3-201ENST00000295324 CDC25AP30304 524 aa19.32■□□□□ 0.68
CDC42EP3-201ENST00000295324 PPP2R5EQ16537 467 aa19.32■□□□□ 0.68
CDC42EP3-201ENST00000295324 HHIPL2Q6UWX4 724 aa19.32■□□□□ 0.68
CDC42EP3-201ENST00000295324 MAP7D1Q3KQU3 841 aa19.32■□□□□ 0.68
CDC42EP3-201ENST00000295324 ERO1AQ96HE7 468 aa19.32■□□□□ 0.68
CDC42EP3-201ENST00000295324 OSBPL5Q9H0X9 879 aaPredicted RBP19.32■□□□□ 0.68
CDC42EP3-201ENST00000295324 DIP2BQ9P265 1576 aa19.31■□□□□ 0.68
CDC42EP3-201ENST00000295324 RPS12P25398 132 aaKnown RBP19.31■□□□□ 0.68
CDC42EP3-201ENST00000295324 LONRF2Q1L5Z9 754 aa19.31■□□□□ 0.68
CDC42EP3-201ENST00000295324 MAP7D3Q8IWC1 876 aa19.31■□□□□ 0.68
CDC42EP3-201ENST00000295324 ZBED2Q9BTP6 218 aa19.31■□□□□ 0.68
CDC42EP3-201ENST00000295324 RPF1Q9H9Y2 349 aaKnown RBP19.31■□□□□ 0.68
CDC42EP3-201ENST00000295324 MAN2A1Q16706 1144 aa19.31■□□□□ 0.68
CDC42EP3-201ENST00000295324 C12orf60Q5U649 245 aa19.31■□□□□ 0.68
CDC42EP3-201ENST00000295324 HDXQ7Z353 690 aa19.31■□□□□ 0.68
CDC42EP3-201ENST00000295324 PCIF1Q9H4Z3 704 aa19.31■□□□□ 0.68
CDC42EP3-201ENST00000295324 ZBTB33Q86T24 672 aa19.31■□□□□ 0.68
CDC42EP3-201ENST00000295324 ATP8B3O60423 1300 aa19.3■□□□□ 0.68
CDC42EP3-201ENST00000295324 TRIM11Q96F44 468 aa19.3■□□□□ 0.68
CDC42EP3-201ENST00000295324 ASB14A6NK59 587 aa19.3■□□□□ 0.68
CDC42EP3-201ENST00000295324 CLIC2O15247 247 aa19.3■□□□□ 0.68
CDC42EP3-201ENST00000295324 AKR1B1P15121 316 aa19.3■□□□□ 0.68
CDC42EP3-201ENST00000295324 HMGCS2P54868 508 aa19.3■□□□□ 0.68
CDC42EP3-201ENST00000295324 QRICH1Q2TAL8 776 aa19.3■□□□□ 0.68
CDC42EP3-201ENST00000295324 USP17L6PQ6QN14 398 aa19.3■□□□□ 0.68
CDC42EP3-201ENST00000295324 CYB5R4Q7L1T6 521 aa19.3■□□□□ 0.68
CDC42EP3-201ENST00000295324 NEK9Q8TD19 979 aa19.3■□□□□ 0.68
CDC42EP3-201ENST00000295324 LMNB1P20700 586 aa19.3■□□□□ 0.68
CDC42EP3-201ENST00000295324 SFNP31947 248 aa19.3■□□□□ 0.68
CDC42EP3-201ENST00000295324 PRELPP51888 382 aa19.3■□□□□ 0.68
CDC42EP3-201ENST00000295324 FAM149B1Q96BN6 582 aa19.3■□□□□ 0.68
CDC42EP3-201ENST00000295324 NMT2O60551 498 aa19.3■□□□□ 0.68
CDC42EP3-201ENST00000295324 IRX5P78411 483 aaPredicted RBP19.3■□□□□ 0.68
CDC42EP3-201ENST00000295324 EEF2KMTQ96G04 330 aa19.3■□□□□ 0.68
CDC42EP3-201ENST00000295324 ATP6V0A4Q9HBG4 840 aa19.3■□□□□ 0.68
CDC42EP3-201ENST00000295324 C19orf81C9J6K1 198 aa19.3■□□□□ 0.68
CDC42EP3-201ENST00000295324 TNPO2O14787 897 aaKnown RBP19.3■□□□□ 0.68
CDC42EP3-201ENST00000295324 IFNB1P01574 187 aa19.3■□□□□ 0.68
CDC42EP3-201ENST00000295324 ARHGAP4P98171 946 aa19.3■□□□□ 0.68
CDC42EP3-201ENST00000295324 ORC2Q13416 577 aaPredicted RBP19.3■□□□□ 0.68
CDC42EP3-201ENST00000295324 MB21D2Q8IYB1 491 aaPredicted RBP19.3■□□□□ 0.68
CDC42EP3-201ENST00000295324 RPAP3Q9H6T3 665 aaPredicted RBP19.3■□□□□ 0.68
CDC42EP3-201ENST00000295324 ELP3Q9H9T3 547 aa19.3■□□□□ 0.68
CDC42EP3-201ENST00000295324 LDHAP00338 332 aaKnown RBP19.29■□□□□ 0.68
CDC42EP3-201ENST00000295324 CPLX4Q7Z7G2 160 aa19.29■□□□□ 0.68
CDC42EP3-201ENST00000295324 RAB17Q9H0T7 212 aa19.29■□□□□ 0.68
CDC42EP3-201ENST00000295324 ZNF233A6NK53 670 aa19.29■□□□□ 0.68
CDC42EP3-201ENST00000295324 SCARF1Q14162 830 aa19.29■□□□□ 0.68
CDC42EP3-201ENST00000295324 SRGAP1Q7Z6B7 1085 aa19.29■□□□□ 0.68
CDC42EP3-201ENST00000295324 PPP1R16BQ96T49 567 aa19.29■□□□□ 0.68
CDC42EP3-201ENST00000295324 MYO3AQ8NEV4 1616 aa19.29■□□□□ 0.68
CDC42EP3-201ENST00000295324 MXI1P50539 228 aa19.29■□□□□ 0.68
CDC42EP3-201ENST00000295324 SMC1BQ8NDV3 1235 aa19.29■□□□□ 0.68
CDC42EP3-201ENST00000295324 CPVLQ9H3G5 476 aa19.29■□□□□ 0.68
CDC42EP3-201ENST00000295324 A6NJR5 290 aa19.29■□□□□ 0.68
CDC42EP3-201ENST00000295324 CCNE1P24864 410 aa19.29■□□□□ 0.68
CDC42EP3-201ENST00000295324 COG2Q14746 738 aa19.29■□□□□ 0.68
CDC42EP3-201ENST00000295324 SPATA24Q86W54 205 aa19.29■□□□□ 0.68
CDC42EP3-201ENST00000295324 LPAR1Q92633 364 aa19.29■□□□□ 0.68
CDC42EP3-201ENST00000295324 HAUS4Q9H6D7 363 aa19.29■□□□□ 0.68
CDC42EP3-201ENST00000295324 MYO1FO00160 1098 aa19.28■□□□□ 0.68
CDC42EP3-201ENST00000295324 ELF1P32519 619 aa19.28■□□□□ 0.68
CDC42EP3-201ENST00000295324 SLC12A2P55011 1212 aa19.28■□□□□ 0.68
CDC42EP3-201ENST00000295324 PAK2Q13177 524 aa19.28■□□□□ 0.68
CDC42EP3-201ENST00000295324 MRFAP1L1Q96HT8 127 aa19.28■□□□□ 0.68
CDC42EP3-201ENST00000295324 RPGRIP1Q96KN7 1286 aa19.28■□□□□ 0.68
CDC42EP3-201ENST00000295324 MSTO1Q9BUK6 570 aa19.28■□□□□ 0.68
CDC42EP3-201ENST00000295324 NXF1Q9UBU9 619 aaKnown RBP19.28■□□□□ 0.68
CDC42EP3-201ENST00000295324 OSTNP61366 133 aa19.28■□□□□ 0.68
CDC42EP3-201ENST00000295324 TAF1CQ15572 869 aaPredicted RBP19.28■□□□□ 0.68
CDC42EP3-201ENST00000295324 LY9Q9HBG7 655 aa19.28■□□□□ 0.68
CDC42EP3-201ENST00000295324 ZNF70Q9UC06 446 aaPredicted RBP19.28■□□□□ 0.68
CDC42EP3-201ENST00000295324 THAP12O43422 761 aa19.28■□□□□ 0.68
CDC42EP3-201ENST00000295324 MED7O43513 233 aa19.28■□□□□ 0.68
CDC42EP3-201ENST00000295324 PPP4R3CPQ6ZMV5 832 aa19.28■□□□□ 0.68
CDC42EP3-201ENST00000295324 DEFB132Q7Z7B7 95 aa19.28■□□□□ 0.68
CDC42EP3-201ENST00000295324 FTOQ9C0B1 505 aaKnown RBP eCLIP19.28■□□□□ 0.68
CDC42EP3-201ENST00000295324 ZBTB12Q9Y330 459 aaPredicted RBP19.28■□□□□ 0.68
CDC42EP3-201ENST00000295324 ATP2C2O75185 946 aa19.28■□□□□ 0.68
CDC42EP3-201ENST00000295324 RESTQ13127 1097 aa19.28■□□□□ 0.68
CDC42EP3-201ENST00000295324 GRK7Q8WTQ7 553 aa19.28■□□□□ 0.68
CDC42EP3-201ENST00000295324 MRRFQ96E11 262 aaKnown RBP19.28■□□□□ 0.68
CDC42EP3-201ENST00000295324 SAR1BQ9Y6B6 198 aa19.28■□□□□ 0.68
CDC42EP3-201ENST00000295324 KIDINS220Q9ULH0 1771 aa19.28■□□□□ 0.68
CDC42EP3-201ENST00000295324 LARGE1O95461 756 aa19.28■□□□□ 0.68
CDC42EP3-201ENST00000295324 PHKA2P46019 1235 aa19.28■□□□□ 0.68
CDC42EP3-201ENST00000295324 PEX3P56589 373 aa19.28■□□□□ 0.68
CDC42EP3-201ENST00000295324 BSPRYQ5W0U4 402 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms