RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 WWC2Q6AWC2 1192 aa12.02□□□□□ -0.49
SNF8-201ENST00000290330 TYW1BQ6NUM6 668 aa12.02□□□□□ -0.49
SNF8-201ENST00000290330 LRRC8DQ7L1W4 858 aa12.02□□□□□ -0.49
SNF8-201ENST00000290330 NLRX1Q86UT6 975 aa12.02□□□□□ -0.49
SNF8-201ENST00000290330 GPR20Q99678 358 aa12.02□□□□□ -0.49
SNF8-201ENST00000290330 USP26Q9BXU7 913 aa12.02□□□□□ -0.49
SNF8-201ENST00000290330 FTOQ9C0B1 505 aaKnown RBP eCLIP12.02□□□□□ -0.49
SNF8-201ENST00000290330 NKX2-4Q9H2Z4 354 aa12.02□□□□□ -0.49
SNF8-201ENST00000290330 TUT1Q9H6E5 874 aaKnown RBP12.02□□□□□ -0.49
SNF8-201ENST00000290330 SLC28A3Q9HAS3 691 aa12.02□□□□□ -0.49
SNF8-201ENST00000290330 FAM217BQ9NTX9 383 aaPredicted RBP12.02□□□□□ -0.49
SNF8-201ENST00000290330 PCDHA6Q9UN73 950 aa12.02□□□□□ -0.49
SNF8-201ENST00000290330 TELO2Q9Y4R8 837 aa12.02□□□□□ -0.49
SNF8-201ENST00000290330 PCDHA8Q9Y5H6 950 aa12.02□□□□□ -0.49
SNF8-201ENST00000290330 V9GY48 417 aaPredicted RBP12.02□□□□□ -0.49
SNF8-201ENST00000290330 SPDYE3A6NKU9 549 aa12.01□□□□□ -0.49
SNF8-201ENST00000290330 GOLGA8AA7E2F4 631 aa12.01□□□□□ -0.49
SNF8-201ENST00000290330 GOLGA8BA8MQT2 603 aa12.01□□□□□ -0.49
SNF8-201ENST00000290330 ATP9AO75110 1047 aa12.01□□□□□ -0.49
SNF8-201ENST00000290330 PARNO95453 639 aaKnown RBP12.01□□□□□ -0.49
SNF8-201ENST00000290330 MYOGP15173 224 aa12.01□□□□□ -0.49
SNF8-201ENST00000290330 CDC27P30260 824 aa12.01□□□□□ -0.49
SNF8-201ENST00000290330 HOXC8P31273 242 aa12.01□□□□□ -0.49
SNF8-201ENST00000290330 RCAN1P53805 252 aa12.01□□□□□ -0.49
SNF8-201ENST00000290330 TRIM71Q2Q1W2 868 aaKnown RBP12.01□□□□□ -0.49
SNF8-201ENST00000290330 TRAF7Q6Q0C0 670 aa12.01□□□□□ -0.49
SNF8-201ENST00000290330 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.01□□□□□ -0.49
SNF8-201ENST00000290330 WNT8BQ93098 351 aa12.01□□□□□ -0.49
SNF8-201ENST00000290330 GPRASP2Q96D09 838 aa12.01□□□□□ -0.49
SNF8-201ENST00000290330 JAKMIP1Q96N16 626 aaKnown RBP12.01□□□□□ -0.49
SNF8-201ENST00000290330 PCDHA11Q9Y5I1 949 aa12.01□□□□□ -0.49
SNF8-201ENST00000290330 SNX14Q9Y5W7 946 aa12.01□□□□□ -0.49
SNF8-201ENST00000290330 UBIAD1Q9Y5Z9 338 aa12.01□□□□□ -0.49
SNF8-201ENST00000290330 MYH7BA7E2Y1 1941 aa12□□□□□ -0.49
SNF8-201ENST00000290330 SCN5AQ14524 2016 aa12□□□□□ -0.49
SNF8-201ENST00000290330 C17orf102A2RUQ5 167 aa12□□□□□ -0.49
SNF8-201ENST00000290330 NBNO60934 754 aa12□□□□□ -0.49
SNF8-201ENST00000290330 BAIAP3O94812 1187 aa12□□□□□ -0.49
SNF8-201ENST00000290330 REC8O95072 547 aa12□□□□□ -0.49
SNF8-201ENST00000290330 CXCL10P02778 98 aa12□□□□□ -0.49
SNF8-201ENST00000290330 SMIM10L2AP0DMW4 78 aa12□□□□□ -0.49
SNF8-201ENST00000290330 SMIM10L2BP0DMW5 78 aa12□□□□□ -0.49
SNF8-201ENST00000290330 NAPAP54920 295 aa12□□□□□ -0.49
SNF8-201ENST00000290330 FGD1P98174 961 aa12□□□□□ -0.49
SNF8-201ENST00000290330 SP4Q02446 784 aa12□□□□□ -0.49
SNF8-201ENST00000290330 ZNF618Q5T7W0 954 aa12□□□□□ -0.49
SNF8-201ENST00000290330 BLOC1S2Q6QNY1 142 aa12□□□□□ -0.49
SNF8-201ENST00000290330 Q6ZUG5 572 aa12□□□□□ -0.49
SNF8-201ENST00000290330 SERINC5Q86VE9 423 aa12□□□□□ -0.49
SNF8-201ENST00000290330 TRIM50Q86XT4 487 aa12□□□□□ -0.49
SNF8-201ENST00000290330 TEX2Q8IWB9 1127 aa12□□□□□ -0.49
SNF8-201ENST00000290330 GIMAP8Q8ND71 665 aaPredicted RBP12□□□□□ -0.49
SNF8-201ENST00000290330 PHOSPHO2Q8TCD6 241 aa12□□□□□ -0.49
SNF8-201ENST00000290330 CDHR1Q96JP9 859 aa12□□□□□ -0.49
SNF8-201ENST00000290330 SLC9A7Q96T83 725 aa12□□□□□ -0.49
SNF8-201ENST00000290330 RNPEPQ9H4A4 650 aa12□□□□□ -0.49
SNF8-201ENST00000290330 PRDM12Q9H4Q4 367 aa12□□□□□ -0.49
SNF8-201ENST00000290330 RIC8AQ9NPQ8 531 aa12□□□□□ -0.49
SNF8-201ENST00000290330 JADE2Q9NQC1 790 aa12□□□□□ -0.49
SNF8-201ENST00000290330 hCG_1984214I3L0E3 225 aa11.99□□□□□ -0.49
SNF8-201ENST00000290330 STXBP3O00186 592 aa11.99□□□□□ -0.49
SNF8-201ENST00000290330 DLL1O00548 723 aa11.99□□□□□ -0.49
SNF8-201ENST00000290330 MAFGO15525 162 aa11.99□□□□□ -0.49
SNF8-201ENST00000290330 KCNA2P16389 499 aa11.99□□□□□ -0.49
SNF8-201ENST00000290330 ADD1P35611 737 aaKnown RBP11.99□□□□□ -0.49
SNF8-201ENST00000290330 APOBRQ0VD83 1088 aa11.99□□□□□ -0.49
SNF8-201ENST00000290330 MTMR1Q13613 665 aa11.99□□□□□ -0.49
SNF8-201ENST00000290330 MBTPS1Q14703 1052 aa11.99□□□□□ -0.49
SNF8-201ENST00000290330 UTP14CQ5TAP6 766 aaKnown RBP11.99□□□□□ -0.49
SNF8-201ENST00000290330 PPP1R18Q6NYC8 613 aa11.99□□□□□ -0.49
SNF8-201ENST00000290330 FBXL16Q8N461 479 aa11.99□□□□□ -0.49
SNF8-201ENST00000290330 ZNF713Q8N859 430 aaPredicted RBP11.99□□□□□ -0.49
SNF8-201ENST00000290330 BRF1Q92994 677 aa11.99□□□□□ -0.49
SNF8-201ENST00000290330 ATP6V0A1Q93050 837 aa11.99□□□□□ -0.49
SNF8-201ENST00000290330 BARHL2Q9NY43 387 aa11.99□□□□□ -0.49
SNF8-201ENST00000290330 NAP1L2Q9ULW6 460 aaPredicted RBP11.99□□□□□ -0.49
SNF8-201ENST00000290330 TANC1Q9C0D5 1861 aa11.99□□□□□ -0.49
SNF8-201ENST00000290330 CCDC196A0A1B0GTZ2 297 aa11.98□□□□□ -0.49
SNF8-201ENST00000290330 SMCO2A6NFE2 343 aa11.98□□□□□ -0.49
SNF8-201ENST00000290330 RBAK-RBAKDNI3L0D1 243 aa11.98□□□□□ -0.49
SNF8-201ENST00000290330 TREHO43280 583 aa11.98□□□□□ -0.49
SNF8-201ENST00000290330 FOSP01100 380 aaPredicted RBP11.98□□□□□ -0.49
SNF8-201ENST00000290330 RPS6KB1P23443 525 aa11.98□□□□□ -0.49
SNF8-201ENST00000290330 TCF7P36402 384 aaPredicted RBP11.98□□□□□ -0.49
SNF8-201ENST00000290330 METAP2P50579 478 aaKnown RBP eCLIP11.98□□□□□ -0.49
SNF8-201ENST00000290330 ADCY7P51828 1080 aa11.98□□□□□ -0.49
SNF8-201ENST00000290330 ADGRE1Q14246 886 aa11.98□□□□□ -0.49
SNF8-201ENST00000290330 TCTN1Q2MV58 587 aa11.98□□□□□ -0.49
SNF8-201ENST00000290330 PPP2R2DQ66LE6 453 aa11.98□□□□□ -0.49
SNF8-201ENST00000290330 CNKSR3Q6P9H4 555 aa11.98□□□□□ -0.49
SNF8-201ENST00000290330 HERC6Q8IVU3 1022 aa11.98□□□□□ -0.49
SNF8-201ENST00000290330 SEPT1Q8WYJ6 367 aa11.98□□□□□ -0.49
SNF8-201ENST00000290330 PGBD1Q96JS3 809 aa11.98□□□□□ -0.49
SNF8-201ENST00000290330 GAS2L1Q99501 681 aaPredicted RBP11.98□□□□□ -0.49
SNF8-201ENST00000290330 MXRA8Q9BRK3 442 aa11.98□□□□□ -0.49
SNF8-201ENST00000290330 AGXT2Q9BYV1 514 aa11.98□□□□□ -0.49
SNF8-201ENST00000290330 EHMT1Q9H9B1 1298 aa11.98□□□□□ -0.49
SNF8-201ENST00000290330 SETD4Q9NVD3 440 aa11.98□□□□□ -0.49
SNF8-201ENST00000290330 ZNF215Q9UL58 517 aaPredicted RBP11.98□□□□□ -0.49
SNF8-201ENST00000290330 TET1Q8NFU7 2136 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms