RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 ATP9AO75110 1047 aa10.98□□□□□ -0.65
HMHB1-201ENST00000289448 STAM2O75886 525 aa10.98□□□□□ -0.65
HMHB1-201ENST00000289448 LGALS2P05162 132 aa10.98□□□□□ -0.65
HMHB1-201ENST00000289448 CPA1P15085 419 aa10.98□□□□□ -0.65
HMHB1-201ENST00000289448 ITGB5P18084 799 aa10.98□□□□□ -0.65
HMHB1-201ENST00000289448 HOXC8P31273 242 aa10.98□□□□□ -0.65
HMHB1-201ENST00000289448 PTK7Q13308 1070 aa10.98□□□□□ -0.65
HMHB1-201ENST00000289448 GNPTABQ3T906 1256 aa10.98□□□□□ -0.65
HMHB1-201ENST00000289448 ZNF618Q5T7W0 954 aa10.98□□□□□ -0.65
HMHB1-201ENST00000289448 RNF20Q5VTR2 975 aa10.98□□□□□ -0.65
HMHB1-201ENST00000289448 TYW1BQ6NUM6 668 aa10.98□□□□□ -0.65
HMHB1-201ENST00000289448 METTL7BQ6UX53 244 aa10.98□□□□□ -0.65
HMHB1-201ENST00000289448 DHX32Q7L7V1 743 aaKnown RBP10.98□□□□□ -0.65
HMHB1-201ENST00000289448 TRIM50Q86XT4 487 aa10.98□□□□□ -0.65
HMHB1-201ENST00000289448 CUL5Q93034 780 aa10.98□□□□□ -0.65
HMHB1-201ENST00000289448 GPR20Q99678 358 aa10.98□□□□□ -0.65
HMHB1-201ENST00000289448 COL25A1Q9BXS0 654 aaPredicted RBP10.98□□□□□ -0.65
HMHB1-201ENST00000289448 FAM217BQ9NTX9 383 aaPredicted RBP10.98□□□□□ -0.65
HMHB1-201ENST00000289448 PCDHA11Q9Y5I1 949 aa10.98□□□□□ -0.65
HMHB1-201ENST00000289448 H3BRB1 525 aa10.97□□□□□ -0.65
HMHB1-201ENST00000289448 CXCL10P02778 98 aa10.97□□□□□ -0.65
HMHB1-201ENST00000289448 SMIM10L2AP0DMW4 78 aa10.97□□□□□ -0.65
HMHB1-201ENST00000289448 SMIM10L2BP0DMW5 78 aa10.97□□□□□ -0.65
HMHB1-201ENST00000289448 ACTN1P12814 892 aa10.97□□□□□ -0.65
HMHB1-201ENST00000289448 NEDD9Q14511 834 aa10.97□□□□□ -0.65
HMHB1-201ENST00000289448 WWC2Q6AWC2 1192 aa10.97□□□□□ -0.65
HMHB1-201ENST00000289448 XRRA1Q6P2D8 792 aa10.97□□□□□ -0.65
HMHB1-201ENST00000289448 HEATR3Q7Z4Q2 680 aa10.97□□□□□ -0.65
HMHB1-201ENST00000289448 TMCO2Q7Z6W1 182 aaPredicted RBP10.97□□□□□ -0.65
HMHB1-201ENST00000289448 SERINC5Q86VE9 423 aa10.97□□□□□ -0.65
HMHB1-201ENST00000289448 CCDC155Q8N6L0 562 aa10.97□□□□□ -0.65
HMHB1-201ENST00000289448 KCNB2Q92953 911 aa10.97□□□□□ -0.65
HMHB1-201ENST00000289448 OSBPL7Q9BZF2 842 aa10.97□□□□□ -0.65
HMHB1-201ENST00000289448 TUT1Q9H6E5 874 aaKnown RBP10.97□□□□□ -0.65
HMHB1-201ENST00000289448 PRDM6Q9NQX0 595 aa10.97□□□□□ -0.65
HMHB1-201ENST00000289448 CNTNAP5Q8WYK1 1306 aa10.97□□□□□ -0.65
HMHB1-201ENST00000289448 GBF1Q92538 1859 aa10.97□□□□□ -0.65
HMHB1-201ENST00000289448 PRRC2BQ5JSZ5 2229 aaKnown RBP10.96□□□□□ -0.65
HMHB1-201ENST00000289448 TANC1Q9C0D5 1861 aa10.96□□□□□ -0.65
HMHB1-201ENST00000289448 EPOPA6NHQ4 379 aa10.96□□□□□ -0.65
HMHB1-201ENST00000289448 RFXAPO00287 272 aa10.96□□□□□ -0.65
HMHB1-201ENST00000289448 NOP56O00567 594 aaKnown RBP10.96□□□□□ -0.65
HMHB1-201ENST00000289448 TREHO43280 583 aa10.96□□□□□ -0.65
HMHB1-201ENST00000289448 ZBTB43O43298 467 aa10.96□□□□□ -0.65
HMHB1-201ENST00000289448 CA3P07451 260 aa10.96□□□□□ -0.65
HMHB1-201ENST00000289448 KCNA2P16389 499 aa10.96□□□□□ -0.65
HMHB1-201ENST00000289448 CDC27P30260 824 aa10.96□□□□□ -0.65
HMHB1-201ENST00000289448 WDR5P61964 334 aaKnown RBP10.96□□□□□ -0.65
HMHB1-201ENST00000289448 DEFB103AP81534 67 aa10.96□□□□□ -0.65
HMHB1-201ENST00000289448 SP4Q02446 784 aa10.96□□□□□ -0.65
HMHB1-201ENST00000289448 UTP14CQ5TAP6 766 aaKnown RBP10.96□□□□□ -0.65
HMHB1-201ENST00000289448 PPP2R2DQ66LE6 453 aa10.96□□□□□ -0.65
HMHB1-201ENST00000289448 SPRED2Q7Z698 418 aa10.96□□□□□ -0.65
HMHB1-201ENST00000289448 HERC6Q8IVU3 1022 aa10.96□□□□□ -0.65
HMHB1-201ENST00000289448 PHOSPHO2Q8TCD6 241 aa10.96□□□□□ -0.65
HMHB1-201ENST00000289448 GAS2L1Q99501 681 aaPredicted RBP10.96□□□□□ -0.65
HMHB1-201ENST00000289448 SENP7Q9BQF6 1050 aa10.96□□□□□ -0.65
HMHB1-201ENST00000289448 USP26Q9BXU7 913 aa10.96□□□□□ -0.65
HMHB1-201ENST00000289448 RNPEPQ9H4A4 650 aa10.96□□□□□ -0.65
HMHB1-201ENST00000289448 PCDHA6Q9UN73 950 aa10.96□□□□□ -0.65
HMHB1-201ENST00000289448 PCDHA8Q9Y5H6 950 aa10.96□□□□□ -0.65
HMHB1-201ENST00000289448 UBIAD1Q9Y5Z9 338 aa10.96□□□□□ -0.65
HMHB1-201ENST00000289448 V9GY48 417 aaPredicted RBP10.96□□□□□ -0.65
HMHB1-201ENST00000289448 KLF18A0A0U1RQI7 1052 aa10.95□□□□□ -0.66
HMHB1-201ENST00000289448 C17orf102A2RUQ5 167 aa10.95□□□□□ -0.66
HMHB1-201ENST00000289448 ADAMTS3O15072 1205 aa10.95□□□□□ -0.66
HMHB1-201ENST00000289448 BAIAP3O94812 1187 aa10.95□□□□□ -0.66
HMHB1-201ENST00000289448 IGFBP4P22692 258 aa10.95□□□□□ -0.66
HMHB1-201ENST00000289448 THPOP40225 353 aa10.95□□□□□ -0.66
HMHB1-201ENST00000289448 KRT32Q14532 448 aa10.95□□□□□ -0.66
HMHB1-201ENST00000289448 RTN1Q16799 776 aa10.95□□□□□ -0.66
HMHB1-201ENST00000289448 CNKSR3Q6P9H4 555 aa10.95□□□□□ -0.66
HMHB1-201ENST00000289448 SYNE3Q6ZMZ3 975 aa10.95□□□□□ -0.66
HMHB1-201ENST00000289448 NLRX1Q86UT6 975 aa10.95□□□□□ -0.66
HMHB1-201ENST00000289448 CYP2W1Q8TAV3 490 aa10.95□□□□□ -0.66
HMHB1-201ENST00000289448 PPM1EQ8WY54 764 aa10.95□□□□□ -0.66
HMHB1-201ENST00000289448 ATP6V0A1Q93050 837 aa10.95□□□□□ -0.66
HMHB1-201ENST00000289448 GPRASP2Q96D09 838 aa10.95□□□□□ -0.66
HMHB1-201ENST00000289448 CCDC136Q96JN2 1154 aa10.95□□□□□ -0.66
HMHB1-201ENST00000289448 PGBD1Q96JS3 809 aa10.95□□□□□ -0.66
HMHB1-201ENST00000289448 SLC9A7Q96T83 725 aa10.95□□□□□ -0.66
HMHB1-201ENST00000289448 CERS4Q9HA82 394 aa10.95□□□□□ -0.66
HMHB1-201ENST00000289448 SETD4Q9NVD3 440 aa10.95□□□□□ -0.66
HMHB1-201ENST00000289448 RBM28Q9NW13 759 aaKnown RBP10.95□□□□□ -0.66
HMHB1-201ENST00000289448 SNX14Q9Y5W7 946 aa10.95□□□□□ -0.66
HMHB1-201ENST00000289448 DOCK5Q9H7D0 1870 aa10.95□□□□□ -0.66
HMHB1-201ENST00000289448 GSTTP1A0A1W2PQM5 241 aa10.94□□□□□ -0.66
HMHB1-201ENST00000289448 LCHNA4D1U4 455 aa10.94□□□□□ -0.66
HMHB1-201ENST00000289448 GOLGA8AA7E2F4 631 aa10.94□□□□□ -0.66
HMHB1-201ENST00000289448 GOLGA8BA8MQT2 603 aa10.94□□□□□ -0.66
HMHB1-201ENST00000289448 STXBP3O00186 592 aa10.94□□□□□ -0.66
HMHB1-201ENST00000289448 PARNO95453 639 aaKnown RBP10.94□□□□□ -0.66
HMHB1-201ENST00000289448 HSPA4P34932 840 aa10.94□□□□□ -0.66
HMHB1-201ENST00000289448 ADD1P35611 737 aaKnown RBP10.94□□□□□ -0.66
HMHB1-201ENST00000289448 ADAM17P78536 824 aa10.94□□□□□ -0.66
HMHB1-201ENST00000289448 TAP1Q03518 808 aa10.94□□□□□ -0.66
HMHB1-201ENST00000289448 APOBRQ0VD83 1088 aa10.94□□□□□ -0.66
HMHB1-201ENST00000289448 MKRN4PQ13434 485 aaPredicted RBP10.94□□□□□ -0.66
HMHB1-201ENST00000289448 CCDC85BQ15834 202 aaPredicted RBP10.94□□□□□ -0.66
HMHB1-201ENST00000289448 JAKMIP1Q96N16 626 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms