RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 RPAP1Q9BWH6 1393 aaPredicted RBP18.98■□□□□ 0.63
PCDHA13-201ENST00000289272 BPIFB4P59827 614 aa18.98■□□□□ 0.63
PCDHA13-201ENST00000289272 FAM212AQ96EL1 285 aa18.98■□□□□ 0.63
PCDHA13-201ENST00000289272 STAMBPL1Q96FJ0 436 aa18.98■□□□□ 0.63
PCDHA13-201ENST00000289272 MTA3Q9BTC8 594 aa18.98■□□□□ 0.63
PCDHA13-201ENST00000289272 PIH1D3Q9NQM4 214 aaKnown RBP18.98■□□□□ 0.63
PCDHA13-201ENST00000289272 A0A1W2PQC6 194 aa18.98■□□□□ 0.63
PCDHA13-201ENST00000289272 MMEP08473 750 aa18.98■□□□□ 0.63
PCDHA13-201ENST00000289272 SERPINB6P35237 376 aa18.98■□□□□ 0.63
PCDHA13-201ENST00000289272 HADHQ16836 314 aaKnown RBP18.98■□□□□ 0.63
PCDHA13-201ENST00000289272 TBC1D1Q86TI0 1168 aaPredicted RBP18.98■□□□□ 0.63
PCDHA13-201ENST00000289272 TTLL11Q8NHH1 800 aa18.98■□□□□ 0.63
PCDHA13-201ENST00000289272 KIFC2Q96AC6 838 aa18.98■□□□□ 0.63
PCDHA13-201ENST00000289272 LGALS16A8MUM7 142 aa18.98■□□□□ 0.63
PCDHA13-201ENST00000289272 PRKAB2O43741 272 aa18.98■□□□□ 0.63
PCDHA13-201ENST00000289272 IFNAR2P48551 515 aa18.98■□□□□ 0.63
PCDHA13-201ENST00000289272 MYCT1Q8N699 235 aa18.98■□□□□ 0.63
PCDHA13-201ENST00000289272 COL4A3BPQ9Y5P4 624 aa18.98■□□□□ 0.63
PCDHA13-201ENST00000289272 IPO5O00410 1097 aaKnown RBP18.97■□□□□ 0.63
PCDHA13-201ENST00000289272 MOCS3O95396 460 aa18.97■□□□□ 0.63
PCDHA13-201ENST00000289272 ADAM9Q13443 819 aa18.97■□□□□ 0.63
PCDHA13-201ENST00000289272 AOC3Q16853 763 aa18.97■□□□□ 0.63
PCDHA13-201ENST00000289272 EPSTI1Q96J88 318 aa18.97■□□□□ 0.63
PCDHA13-201ENST00000289272 EIF2AQ9BY44 585 aaKnown RBP18.97■□□□□ 0.63
PCDHA13-201ENST00000289272 ZMYND10O75800 440 aa18.97■□□□□ 0.63
PCDHA13-201ENST00000289272 DR1Q01658 176 aa18.97■□□□□ 0.63
PCDHA13-201ENST00000289272 ARID5BQ14865 1188 aa18.97■□□□□ 0.63
PCDHA13-201ENST00000289272 PAGE5Q96GU1 130 aa18.97■□□□□ 0.63
PCDHA13-201ENST00000289272 PPEF1O14829 653 aaPredicted RBP18.97■□□□□ 0.63
PCDHA13-201ENST00000289272 ATP1A3P13637 1013 aa18.97■□□□□ 0.63
PCDHA13-201ENST00000289272 EIF4A3P38919 411 aaKnown RBP18.97■□□□□ 0.63
PCDHA13-201ENST00000289272 TSGA10IPQ3SY00 556 aa18.97■□□□□ 0.63
PCDHA13-201ENST00000289272 OTUD6AQ7L8S5 288 aa18.97■□□□□ 0.63
PCDHA13-201ENST00000289272 PACSIN2Q9UNF0 486 aaPredicted RBP18.97■□□□□ 0.63
PCDHA13-201ENST00000289272 SCINQ9Y6U3 715 aa18.97■□□□□ 0.63
PCDHA13-201ENST00000289272 NEXMIFQ5QGS0 1516 aa18.97■□□□□ 0.63
PCDHA13-201ENST00000289272 USP27XA6NNY8 438 aa18.97■□□□□ 0.63
PCDHA13-201ENST00000289272 FOXP2O15409 715 aa18.97■□□□□ 0.63
PCDHA13-201ENST00000289272 GOLGA8HP0CJ92 632 aa18.97■□□□□ 0.63
PCDHA13-201ENST00000289272 GARSP41250 739 aaKnown RBP18.97■□□□□ 0.63
PCDHA13-201ENST00000289272 GOLGA8FQ08AF8 430 aa18.97■□□□□ 0.63
PCDHA13-201ENST00000289272 GOLGA8DPQ0D2H9 430 aa18.97■□□□□ 0.63
PCDHA13-201ENST00000289272 GPBP1Q86WP2 473 aa18.97■□□□□ 0.63
PCDHA13-201ENST00000289272 CHMP6Q96FZ7 201 aa18.97■□□□□ 0.63
PCDHA13-201ENST00000289272 NFU1Q9UMS0 254 aa18.97■□□□□ 0.63
PCDHA13-201ENST00000289272 MYO3AQ8NEV4 1616 aa18.97■□□□□ 0.63
PCDHA13-201ENST00000289272 ITIH6Q6UXX5 1313 aa18.97■□□□□ 0.63
PCDHA13-201ENST00000289272 H0YCG3 227 aa18.96■□□□□ 0.63
PCDHA13-201ENST00000289272 GYS2P54840 703 aa18.96■□□□□ 0.63
PCDHA13-201ENST00000289272 TCP10Q12799 353 aa18.96■□□□□ 0.63
PCDHA13-201ENST00000289272 NR5A1Q13285 461 aa18.96■□□□□ 0.63
PCDHA13-201ENST00000289272 CLEC4GQ6UXB4 293 aa18.96■□□□□ 0.63
PCDHA13-201ENST00000289272 SERPINI1Q99574 410 aa18.96■□□□□ 0.63
PCDHA13-201ENST00000289272 EDEM3Q9BZQ6 932 aa18.96■□□□□ 0.63
PCDHA13-201ENST00000289272 RXRBP28702 533 aa18.96■□□□□ 0.63
PCDHA13-201ENST00000289272 BTDP43251 543 aa18.96■□□□□ 0.63
PCDHA13-201ENST00000289272 USH1GQ495M9 461 aa18.96■□□□□ 0.63
PCDHA13-201ENST00000289272 PCDHA4Q9UN74 947 aa18.96■□□□□ 0.63
PCDHA13-201ENST00000289272 PCDHA12Q9UN75 941 aa18.96■□□□□ 0.63
PCDHA13-201ENST00000289272 MIF4GDA9UHW6 222 aaKnown RBP18.96■□□□□ 0.63
PCDHA13-201ENST00000289272 CRCPO75575 148 aa18.96■□□□□ 0.63
PCDHA13-201ENST00000289272 MYCLP12524 364 aaPredicted RBP18.96■□□□□ 0.63
PCDHA13-201ENST00000289272 GPIHBP1Q8IV16 184 aa18.96■□□□□ 0.63
PCDHA13-201ENST00000289272 PPP1R37O75864 691 aa18.96■□□□□ 0.63
PCDHA13-201ENST00000289272 FOSP01100 380 aaPredicted RBP18.96■□□□□ 0.63
PCDHA13-201ENST00000289272 AFPP02771 609 aaKnown RBP18.96■□□□□ 0.63
PCDHA13-201ENST00000289272 SP4Q02446 784 aa18.96■□□□□ 0.63
PCDHA13-201ENST00000289272 ARMCX5Q6P1M9 558 aa18.96■□□□□ 0.63
PCDHA13-201ENST00000289272 SLITRK6Q9H5Y7 841 aa18.96■□□□□ 0.63
PCDHA13-201ENST00000289272 PSTPIP2Q9H939 334 aa18.96■□□□□ 0.63
PCDHA13-201ENST00000289272 LCMT1Q9UIC8 334 aa18.96■□□□□ 0.63
PCDHA13-201ENST00000289272 USP42Q9H9J4 1324 aaKnown RBP18.96■□□□□ 0.63
PCDHA13-201ENST00000289272 MGEA5O60502 916 aa18.95■□□□□ 0.62
PCDHA13-201ENST00000289272 GRM1Q13255 1194 aa18.95■□□□□ 0.62
PCDHA13-201ENST00000289272 CDC37Q16543 378 aaPredicted RBP18.95■□□□□ 0.62
PCDHA13-201ENST00000289272 MRRFQ96E11 262 aaKnown RBP18.95■□□□□ 0.62
PCDHA13-201ENST00000289272 LOC102724159A0A0B4J2E5 919 aa18.95■□□□□ 0.62
PCDHA13-201ENST00000289272 PRPF3O43395 683 aaKnown RBP18.95■□□□□ 0.62
PCDHA13-201ENST00000289272 GAP43P17677 238 aa18.95■□□□□ 0.62
PCDHA13-201ENST00000289272 PTPREP23469 700 aa18.95■□□□□ 0.62
PCDHA13-201ENST00000289272 MCAMP43121 646 aa18.95■□□□□ 0.62
PCDHA13-201ENST00000289272 SATB1Q01826 763 aa18.95■□□□□ 0.62
PCDHA13-201ENST00000289272 PWP2Q15269 919 aaKnown RBP18.95■□□□□ 0.62
PCDHA13-201ENST00000289272 KRT27Q7Z3Y8 459 aa18.95■□□□□ 0.62
PCDHA13-201ENST00000289272 ZC3H15Q8WU90 426 aaKnown RBP18.95■□□□□ 0.62
PCDHA13-201ENST00000289272 AIFM3Q96NN9 605 aa18.95■□□□□ 0.62
PCDHA13-201ENST00000289272 DYNLL1P63167 89 aaKnown RBP18.95■□□□□ 0.62
PCDHA13-201ENST00000289272 CERKLQ49MI3 558 aaPredicted RBP18.95■□□□□ 0.62
PCDHA13-201ENST00000289272 NSMFQ6X4W1 530 aa18.95■□□□□ 0.62
PCDHA13-201ENST00000289272 NOD1Q9Y239 953 aa18.95■□□□□ 0.62
PCDHA13-201ENST00000289272 PLTPP55058 493 aa18.95■□□□□ 0.62
PCDHA13-201ENST00000289272 RASGRF1Q13972 1273 aa18.95■□□□□ 0.62
PCDHA13-201ENST00000289272 KRT26Q7Z3Y9 468 aa18.95■□□□□ 0.62
PCDHA13-201ENST00000289272 PIGBQ92521 554 aa18.95■□□□□ 0.62
PCDHA13-201ENST00000289272 SPDL1Q96EA4 605 aa18.95■□□□□ 0.62
PCDHA13-201ENST00000289272 STRBPQ96SI9 672 aaKnown RBP18.95■□□□□ 0.62
PCDHA13-201ENST00000289272 AXIN2Q9Y2T1 843 aa18.95■□□□□ 0.62
PCDHA13-201ENST00000289272 ARHGAP10A1A4S6 786 aa18.94■□□□□ 0.62
PCDHA13-201ENST00000289272 STXBP3O00186 592 aa18.94■□□□□ 0.62
PCDHA13-201ENST00000289272 ASPHQ12797 758 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms