RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 C6orf222P0C671 652 aaPredicted RBP10.53□□□□□ -0.72
HMGN1-201ENST00000288344 MRPL12P52815 198 aaKnown RBP10.53□□□□□ -0.72
HMGN1-201ENST00000288344 RTP1P59025 263 aa10.53□□□□□ -0.72
HMGN1-201ENST00000288344 FAAP100Q0VG06 881 aa10.53□□□□□ -0.72
HMGN1-201ENST00000288344 TTLL4Q14679 1199 aa10.53□□□□□ -0.72
HMGN1-201ENST00000288344 UBE2SQ16763 222 aa10.53□□□□□ -0.72
HMGN1-201ENST00000288344 CELF3Q5SZQ8 465 aaKnown RBP10.53□□□□□ -0.72
HMGN1-201ENST00000288344 CXCL17Q6UXB2 119 aa10.53□□□□□ -0.72
HMGN1-201ENST00000288344 PARP9Q8IXQ6 854 aa10.53□□□□□ -0.72
HMGN1-201ENST00000288344 DPF3Q92784 378 aa10.53□□□□□ -0.72
HMGN1-201ENST00000288344 TRIM43Q96BQ3 446 aaPredicted RBP10.53□□□□□ -0.72
HMGN1-201ENST00000288344 VWCEQ96DN2 955 aa10.53□□□□□ -0.72
HMGN1-201ENST00000288344 CTAGE1Q96RT6 745 aa10.53□□□□□ -0.72
HMGN1-201ENST00000288344 EPAS1Q99814 870 aa10.53□□□□□ -0.72
HMGN1-201ENST00000288344 PCDHA6Q9UN73 950 aa10.53□□□□□ -0.72
HMGN1-201ENST00000288344 PCDHA8Q9Y5H6 950 aa10.53□□□□□ -0.72
HMGN1-201ENST00000288344 CDH23Q9H251 3354 aa10.52□□□□□ -0.72
HMGN1-201ENST00000288344 SMCO2A6NFE2 343 aa10.52□□□□□ -0.73
HMGN1-201ENST00000288344 KBTBD13C9JR72 458 aa10.52□□□□□ -0.73
HMGN1-201ENST00000288344 ARVCFO00192 962 aa10.52□□□□□ -0.73
HMGN1-201ENST00000288344 HAS3O00219 553 aa10.52□□□□□ -0.73
HMGN1-201ENST00000288344 MEIS1O00470 390 aa10.52□□□□□ -0.73
HMGN1-201ENST00000288344 PPFIA3O75145 1194 aa10.52□□□□□ -0.73
HMGN1-201ENST00000288344 CYP3A4P08684 503 aa10.52□□□□□ -0.73
HMGN1-201ENST00000288344 BMP8BP34820 402 aa10.52□□□□□ -0.73
HMGN1-201ENST00000288344 SREBF1P36956 1147 aa10.52□□□□□ -0.73
HMGN1-201ENST00000288344 NEK4P51957 841 aa10.52□□□□□ -0.73
HMGN1-201ENST00000288344 TLE2Q04725 743 aa10.52□□□□□ -0.73
HMGN1-201ENST00000288344 TRIM60Q495X7 471 aa10.52□□□□□ -0.73
HMGN1-201ENST00000288344 KCNV1Q6PIU1 500 aa10.52□□□□□ -0.73
HMGN1-201ENST00000288344 SEPT14Q6ZU15 432 aa10.52□□□□□ -0.73
HMGN1-201ENST00000288344 HEATR3Q7Z4Q2 680 aa10.52□□□□□ -0.73
HMGN1-201ENST00000288344 SH3RF1Q7Z6J0 888 aa10.52□□□□□ -0.73
HMGN1-201ENST00000288344 FAM126BQ8IXS8 530 aa10.52□□□□□ -0.73
HMGN1-201ENST00000288344 CYP2W1Q8TAV3 490 aa10.52□□□□□ -0.73
HMGN1-201ENST00000288344 AIFM3Q96NN9 605 aa10.52□□□□□ -0.73
HMGN1-201ENST00000288344 SENP7Q9BQF6 1050 aa10.52□□□□□ -0.73
HMGN1-201ENST00000288344 SH3GLB2Q9NR46 395 aa10.52□□□□□ -0.73
HMGN1-201ENST00000288344 RBM27Q9P2N5 1060 aaKnown RBP10.52□□□□□ -0.73
HMGN1-201ENST00000288344 IGLV3-22A0A075B6J6 115 aa10.51□□□□□ -0.73
HMGN1-201ENST00000288344 KIAA0355O15063 1070 aa10.51□□□□□ -0.73
HMGN1-201ENST00000288344 DTNBO60941 627 aa10.51□□□□□ -0.73
HMGN1-201ENST00000288344 CABYRO75952 493 aa10.51□□□□□ -0.73
HMGN1-201ENST00000288344 FOSP01100 380 aaPredicted RBP10.51□□□□□ -0.73
HMGN1-201ENST00000288344 MYCLP12524 364 aaPredicted RBP10.51□□□□□ -0.73
HMGN1-201ENST00000288344 KCNA2P16389 499 aa10.51□□□□□ -0.73
HMGN1-201ENST00000288344 UBA1P22314 1058 aaKnown RBP10.51□□□□□ -0.73
HMGN1-201ENST00000288344 CCND2P30279 289 aa10.51□□□□□ -0.73
HMGN1-201ENST00000288344 FGD1P98174 961 aa10.51□□□□□ -0.73
HMGN1-201ENST00000288344 TSR1Q2NL82 804 aaKnown RBP10.51□□□□□ -0.73
HMGN1-201ENST00000288344 HSDL1Q3SXM5 330 aa10.51□□□□□ -0.73
HMGN1-201ENST00000288344 FAM177A1Q8N128 213 aaPredicted RBP10.51□□□□□ -0.73
HMGN1-201ENST00000288344 AFG1LQ8WV93 481 aa10.51□□□□□ -0.73
HMGN1-201ENST00000288344 CUL5Q93034 780 aa10.51□□□□□ -0.73
HMGN1-201ENST00000288344 MPHOSPH6Q99547 160 aaKnown RBP10.51□□□□□ -0.73
HMGN1-201ENST00000288344 C16orf70Q9BSU1 422 aa10.51□□□□□ -0.73
HMGN1-201ENST00000288344 C22orf23Q9BZE7 217 aa10.51□□□□□ -0.73
HMGN1-201ENST00000288344 AP5M1Q9H0R1 490 aa10.51□□□□□ -0.73
HMGN1-201ENST00000288344 JADE2Q9NQC1 790 aa10.51□□□□□ -0.73
HMGN1-201ENST00000288344 PDLIM7Q9NR12 457 aa10.51□□□□□ -0.73
HMGN1-201ENST00000288344 TMEM260Q9NX78 707 aa10.51□□□□□ -0.73
HMGN1-201ENST00000288344 RTEL1Q9NZ71 1219 aa10.51□□□□□ -0.73
HMGN1-201ENST00000288344 TBX21Q9UL17 535 aa10.51□□□□□ -0.73
HMGN1-201ENST00000288344 NR2E3Q9Y5X4 410 aa10.51□□□□□ -0.73
HMGN1-201ENST00000288344 LTBP2Q14767 1821 aa10.51□□□□□ -0.73
HMGN1-201ENST00000288344 DOCK5Q9H7D0 1870 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 STK36Q9NRP7 1315 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 POTEB3A0JP26 581 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 FAM86B1E9PN63 330 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 MAFGO15525 162 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 DHX15O43143 795 aaKnown RBP10.5□□□□□ -0.73
HMGN1-201ENST00000288344 KPNA6O60684 536 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 PPFIA4O75335 1185 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 GH1P01241 217 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 MMP3P08254 477 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 FAM86B2P0C5J1 330 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 HOXC8P31273 242 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 CIITAP33076 1130 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 NAPAP54920 295 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 AP3B2Q13367 1082 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 ITGA7Q13683 1181 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 LAMC2Q13753 1193 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 ANKRD1Q15327 319 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 POTEBQ6S5H4 581 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 SESTD1Q86VW0 696 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 C7orf61Q8IZ16 206 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 NECAB1Q8N987 351 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 DAGLBQ8NCG7 672 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 OR6J1Q8NGC5 347 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 PPTC7Q8NI37 304 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 SMARCC2Q8TAQ2 1214 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 GTF3C6Q969F1 213 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 LENG9Q96B70 501 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 GPRASP2Q96D09 838 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 GLT1D1Q96MS3 346 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 TBC1D32Q96NH3 1257 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 SLC26A6Q9BXS9 759 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 SEZ6LQ9BYH1 1024 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 BACH2Q9BYV9 841 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 GLT8D2Q9H1C3 349 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 192.2 ms