RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 SKIV2LQ15477 1246 aaKnown RBP17.55■□□□□ 0.4
PDE6D-201ENST00000287600 CCDC82Q8N4S0 544 aa17.55■□□□□ 0.4
PDE6D-201ENST00000287600 SRBD1Q8N5C6 995 aaKnown RBP17.55■□□□□ 0.4
PDE6D-201ENST00000287600 ARNTL2Q8WYA1 636 aa17.55■□□□□ 0.4
PDE6D-201ENST00000287600 DHX38Q92620 1227 aaKnown RBP17.55■□□□□ 0.4
PDE6D-201ENST00000287600 BRF1Q92994 677 aa17.55■□□□□ 0.4
PDE6D-201ENST00000287600 RRP36Q96EU6 259 aaKnown RBP17.55■□□□□ 0.4
PDE6D-201ENST00000287600 CTAGE1Q96RT6 745 aa17.55■□□□□ 0.4
PDE6D-201ENST00000287600 PDCD2LQ9BRP1 358 aa17.55■□□□□ 0.4
PDE6D-201ENST00000287600 SPZ1Q9BXG8 430 aa17.55■□□□□ 0.4
PDE6D-201ENST00000287600 ZSWIM6Q9HCJ5 1215 aa17.55■□□□□ 0.4
PDE6D-201ENST00000287600 MAP3K20Q9NYL2 800 aaKnown RBP17.55■□□□□ 0.4
PDE6D-201ENST00000287600 TLL1O43897 1013 aa17.54■□□□□ 0.4
PDE6D-201ENST00000287600 PARNO95453 639 aaKnown RBP17.54■□□□□ 0.4
PDE6D-201ENST00000287600 RBL2Q08999 1139 aa17.54■□□□□ 0.4
PDE6D-201ENST00000287600 APOBRQ0VD83 1088 aa17.54■□□□□ 0.4
PDE6D-201ENST00000287600 PGM5Q15124 567 aa17.54■□□□□ 0.4
PDE6D-201ENST00000287600 KIAA0753Q2KHM9 967 aa17.54■□□□□ 0.4
PDE6D-201ENST00000287600 TMTC3Q6ZXV5 915 aa17.54■□□□□ 0.4
PDE6D-201ENST00000287600 RUFY3Q7L099 469 aa17.54■□□□□ 0.4
PDE6D-201ENST00000287600 UHRF1Q96T88 793 aaPredicted RBP17.54■□□□□ 0.4
PDE6D-201ENST00000287600 CYP46A1Q9Y6A2 500 aa17.54■□□□□ 0.4
PDE6D-201ENST00000287600 EPOPA6NHQ4 379 aa17.53■□□□□ 0.4
PDE6D-201ENST00000287600 GOLGA8AA7E2F4 631 aa17.53■□□□□ 0.4
PDE6D-201ENST00000287600 GOLGA8BA8MQT2 603 aa17.53■□□□□ 0.4
PDE6D-201ENST00000287600 ARHGEF15O94989 841 aa17.53■□□□□ 0.4
PDE6D-201ENST00000287600 SEC24BO95487 1268 aa17.53■□□□□ 0.4
PDE6D-201ENST00000287600 GGPS1O95749 300 aa17.53■□□□□ 0.4
PDE6D-201ENST00000287600 CKBP12277 381 aa17.53■□□□□ 0.4
PDE6D-201ENST00000287600 WDR5P61964 334 aaKnown RBP17.53■□□□□ 0.4
PDE6D-201ENST00000287600 TAP1Q03518 808 aa17.53■□□□□ 0.4
PDE6D-201ENST00000287600 RTN1Q16799 776 aa17.53■□□□□ 0.4
PDE6D-201ENST00000287600 CNKSR3Q6P9H4 555 aa17.53■□□□□ 0.4
PDE6D-201ENST00000287600 KCNV1Q6PIU1 500 aa17.53■□□□□ 0.4
PDE6D-201ENST00000287600 SPATA33Q96N06 139 aa17.53■□□□□ 0.4
PDE6D-201ENST00000287600 UPF3BQ9BZI7 483 aaKnown RBP17.53■□□□□ 0.4
PDE6D-201ENST00000287600 TM6SF1Q9BZW5 370 aa17.53■□□□□ 0.4
PDE6D-201ENST00000287600 RBM28Q9NW13 759 aaKnown RBP17.53■□□□□ 0.4
PDE6D-201ENST00000287600 SEC63Q9UGP8 760 aaKnown RBP17.53■□□□□ 0.4
PDE6D-201ENST00000287600 TTC28Q96AY4 2481 aa17.53■□□□□ 0.4
PDE6D-201ENST00000287600 GCOM1H8Y6P7 765 aaPredicted RBP17.52■□□□□ 0.4
PDE6D-201ENST00000287600 HAS3O00219 553 aa17.52■□□□□ 0.4
PDE6D-201ENST00000287600 RGS20O76081 388 aa17.52■□□□□ 0.4
PDE6D-201ENST00000287600 POLR2MP0CAP2 368 aa17.52■□□□□ 0.4
PDE6D-201ENST00000287600 UBA1P22314 1058 aaKnown RBP17.52■□□□□ 0.4
PDE6D-201ENST00000287600 CCND2P30279 289 aa17.52■□□□□ 0.4
PDE6D-201ENST00000287600 PTK7Q13308 1070 aa17.52■□□□□ 0.4
PDE6D-201ENST00000287600 FCHSD1Q86WN1 690 aa17.52■□□□□ 0.4
PDE6D-201ENST00000287600 FBXL16Q8N461 479 aa17.52■□□□□ 0.4
PDE6D-201ENST00000287600 SAMD3Q8N6K7 520 aa17.52■□□□□ 0.4
PDE6D-201ENST00000287600 IL31RAQ8NI17 732 aa17.52■□□□□ 0.4
PDE6D-201ENST00000287600 ZBED2Q9BTP6 218 aa17.52■□□□□ 0.4
PDE6D-201ENST00000287600 CHD7Q9P2D1 2997 aa17.52■□□□□ 0.4
PDE6D-201ENST00000287600 MTCH2Q9Y6C9 303 aa17.52■□□□□ 0.4
PDE6D-201ENST00000287600 hCG_1642624A0A1W2PR95 340 aa17.51■□□□□ 0.39
PDE6D-201ENST00000287600 NBNO60934 754 aa17.51■□□□□ 0.39
PDE6D-201ENST00000287600 CXCL10P02778 98 aa17.51■□□□□ 0.39
PDE6D-201ENST00000287600 METAP2P50579 478 aaKnown RBP eCLIP17.51■□□□□ 0.39
PDE6D-201ENST00000287600 RCAN1P53805 252 aa17.51■□□□□ 0.39
PDE6D-201ENST00000287600 DEFB103AP81534 67 aa17.51■□□□□ 0.39
PDE6D-201ENST00000287600 GPNMBQ14956 572 aa17.51■□□□□ 0.39
PDE6D-201ENST00000287600 AAK1Q2M2I8 961 aa17.51■□□□□ 0.39
PDE6D-201ENST00000287600 HSDL1Q3SXM5 330 aa17.51■□□□□ 0.39
PDE6D-201ENST00000287600 CELF3Q5SZQ8 465 aaKnown RBP17.51■□□□□ 0.39
PDE6D-201ENST00000287600 MYSM1Q5VVJ2 828 aa17.51■□□□□ 0.39
PDE6D-201ENST00000287600 TMCO2Q7Z6W1 182 aaPredicted RBP17.51■□□□□ 0.39
PDE6D-201ENST00000287600 VSIG10LQ86VR7 867 aa17.51■□□□□ 0.39
PDE6D-201ENST00000287600 ZFP91Q96JP5 570 aaPredicted RBP17.51■□□□□ 0.39
PDE6D-201ENST00000287600 AGXT2Q9BYV1 514 aa17.51■□□□□ 0.39
PDE6D-201ENST00000287600 TCF20Q9UGU0 1960 aaKnown RBP17.5■□□□□ 0.39
PDE6D-201ENST00000287600 PRRC2BQ5JSZ5 2229 aaKnown RBP17.5■□□□□ 0.39
PDE6D-201ENST00000287600 PPFIA4O75335 1185 aa17.5■□□□□ 0.39
PDE6D-201ENST00000287600 HOXD8P13378 290 aaPredicted RBP17.5■□□□□ 0.39
PDE6D-201ENST00000287600 CDC27P30260 824 aa17.5■□□□□ 0.39
PDE6D-201ENST00000287600 ANAPC15P60006 121 aa17.5■□□□□ 0.39
PDE6D-201ENST00000287600 ZNF200P98182 395 aaPredicted RBP17.5■□□□□ 0.39
PDE6D-201ENST00000287600 TFF2Q03403 129 aa17.5■□□□□ 0.39
PDE6D-201ENST00000287600 KRT40Q6A162 431 aa17.5■□□□□ 0.39
PDE6D-201ENST00000287600 MLXIPQ9HAP2 919 aa17.5■□□□□ 0.39
PDE6D-201ENST00000287600 FAM217BQ9NTX9 383 aaPredicted RBP17.5■□□□□ 0.39
PDE6D-201ENST00000287600 PDRG1Q9NUG6 133 aa17.5■□□□□ 0.39
PDE6D-201ENST00000287600 BAZ2BQ9UIF8 2168 aaKnown RBP17.5■□□□□ 0.39
PDE6D-201ENST00000287600 CCDC196A0A1B0GTZ2 297 aa17.49■□□□□ 0.39
PDE6D-201ENST00000287600 ABHD14A-ACY1A0A1B0GW23 586 aa17.49■□□□□ 0.39
PDE6D-201ENST00000287600 LCHNA4D1U4 455 aa17.49■□□□□ 0.39
PDE6D-201ENST00000287600 EFCAB14O75071 495 aa17.49■□□□□ 0.39
PDE6D-201ENST00000287600 TGFB3P10600 412 aa17.49■□□□□ 0.39
PDE6D-201ENST00000287600 POU3F3P20264 500 aaPredicted RBP17.49■□□□□ 0.39
PDE6D-201ENST00000287600 ADD1P35611 737 aaKnown RBP17.49■□□□□ 0.39
PDE6D-201ENST00000287600 GRB10Q13322 594 aa17.49■□□□□ 0.39
PDE6D-201ENST00000287600 TOB2Q14106 344 aaPredicted RBP17.49■□□□□ 0.39
PDE6D-201ENST00000287600 C8orf34Q49A92 452 aa17.49■□□□□ 0.39
PDE6D-201ENST00000287600 ZNF618Q5T7W0 954 aa17.49■□□□□ 0.39
PDE6D-201ENST00000287600 SPRED2Q7Z698 418 aa17.49■□□□□ 0.39
PDE6D-201ENST00000287600 GPKOWQ92917 476 aaPredicted RBP eCLIP17.49■□□□□ 0.39
PDE6D-201ENST00000287600 WNT8BQ93098 351 aa17.49■□□□□ 0.39
PDE6D-201ENST00000287600 MUC3AQ02505 3323 aa17.49■□□□□ 0.39
PDE6D-201ENST00000287600 DOCK5Q9H7D0 1870 aa17.48■□□□□ 0.39
PDE6D-201ENST00000287600 NOP56O00567 594 aaKnown RBP17.48■□□□□ 0.39
PDE6D-201ENST00000287600 SP2Q02086 613 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms