RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 SULF1Q8IWU6 871 aa8.4□□□□□ -1.06
TRIM42-201ENST00000286349 LRRC47Q8N1G4 583 aaKnown RBP8.4□□□□□ -1.06
TRIM42-201ENST00000286349 CSRNP1Q96S65 589 aa8.4□□□□□ -1.06
TRIM42-201ENST00000286349 CRACR2AQ9BSW2 395 aa8.4□□□□□ -1.06
TRIM42-201ENST00000286349 VAT1LQ9HCJ6 419 aa8.4□□□□□ -1.06
TRIM42-201ENST00000286349 RWDD2AQ9UIY3 292 aa8.4□□□□□ -1.06
TRIM42-201ENST00000286349 PHF20L1A8MW92 1017 aa8.4□□□□□ -1.07
TRIM42-201ENST00000286349 ZBTB5O15062 677 aa8.4□□□□□ -1.07
TRIM42-201ENST00000286349 RPN1P04843 607 aaKnown RBP8.4□□□□□ -1.07
TRIM42-201ENST00000286349 NAT2P11245 290 aa8.4□□□□□ -1.07
TRIM42-201ENST00000286349 GCFC2P16383 781 aaKnown RBP8.4□□□□□ -1.07
TRIM42-201ENST00000286349 TNNI2P48788 182 aa8.4□□□□□ -1.07
TRIM42-201ENST00000286349 CUL4BQ13620 913 aa8.4□□□□□ -1.07
TRIM42-201ENST00000286349 RBBP5Q15291 538 aaKnown RBP8.4□□□□□ -1.07
TRIM42-201ENST00000286349 E2F5Q15329 346 aa8.4□□□□□ -1.07
TRIM42-201ENST00000286349 LETM2Q2VYF4 491 aa8.4□□□□□ -1.07
TRIM42-201ENST00000286349 MYLK4Q86YV6 388 aaPredicted RBP8.4□□□□□ -1.07
TRIM42-201ENST00000286349 ZSCAN29Q8IWY8 852 aaPredicted RBP8.4□□□□□ -1.07
TRIM42-201ENST00000286349 TBCKQ8TEA7 893 aa8.4□□□□□ -1.07
TRIM42-201ENST00000286349 RSPH1Q8WYR4 309 aa8.4□□□□□ -1.07
TRIM42-201ENST00000286349 CUL5Q93034 780 aa8.4□□□□□ -1.07
TRIM42-201ENST00000286349 MIEF2Q96C03 454 aa8.4□□□□□ -1.07
TRIM42-201ENST00000286349 MTMR8Q96EF0 704 aa8.4□□□□□ -1.07
TRIM42-201ENST00000286349 CDCA5Q96FF9 252 aa8.4□□□□□ -1.07
TRIM42-201ENST00000286349 LRRC27Q9C0I9 530 aa8.4□□□□□ -1.07
TRIM42-201ENST00000286349 FRMPD2Q68DX3 1309 aaPredicted RBP8.4□□□□□ -1.07
TRIM42-201ENST00000286349 PPP1R3GB7ZBB8 358 aa8.39□□□□□ -1.07
TRIM42-201ENST00000286349 SLC26A4O43511 780 aa8.39□□□□□ -1.07
TRIM42-201ENST00000286349 USP2O75604 605 aaPredicted RBP8.39□□□□□ -1.07
TRIM42-201ENST00000286349 VCAM1P19320 739 aa8.39□□□□□ -1.07
TRIM42-201ENST00000286349 MAGEA9P43362 315 aa8.39□□□□□ -1.07
TRIM42-201ENST00000286349 TNFAIP1Q13829 316 aa8.39□□□□□ -1.07
TRIM42-201ENST00000286349 ZNF394Q53GI3 561 aa8.39□□□□□ -1.07
TRIM42-201ENST00000286349 CST9Q5W186 159 aa8.39□□□□□ -1.07
TRIM42-201ENST00000286349 SPECC1LQ69YQ0 1117 aa8.39□□□□□ -1.07
TRIM42-201ENST00000286349 PPP4R3AQ6IN85 833 aa8.39□□□□□ -1.07
TRIM42-201ENST00000286349 LEKR1Q6ZMV7 388 aa8.39□□□□□ -1.07
TRIM42-201ENST00000286349 MOB2Q70IA6 237 aa8.39□□□□□ -1.07
TRIM42-201ENST00000286349 CABP7Q86V35 215 aa8.39□□□□□ -1.07
TRIM42-201ENST00000286349 ADGRF4Q8IZF3 695 aa8.39□□□□□ -1.07
TRIM42-201ENST00000286349 GMCL1P1Q8NEA9 526 aa8.39□□□□□ -1.07
TRIM42-201ENST00000286349 THOC1Q96FV9 657 aaKnown RBP8.39□□□□□ -1.07
TRIM42-201ENST00000286349 CALML4Q96GE6 196 aa8.39□□□□□ -1.07
TRIM42-201ENST00000286349 JMJD4Q9H9V9 463 aa8.39□□□□□ -1.07
TRIM42-201ENST00000286349 ZNF446Q9NWS9 450 aa8.39□□□□□ -1.07
TRIM42-201ENST00000286349 PPP2R3BQ9Y5P8 575 aa8.39□□□□□ -1.07
TRIM42-201ENST00000286349 A0A1B0GTH6 734 aa8.39□□□□□ -1.07
TRIM42-201ENST00000286349 TBC1D12O60347 775 aa8.39□□□□□ -1.07
TRIM42-201ENST00000286349 TPPPO94811 219 aa8.39□□□□□ -1.07
TRIM42-201ENST00000286349 FXR2P51116 673 aaKnown RBP eCLIP8.39□□□□□ -1.07
TRIM42-201ENST00000286349 PAK1Q13153 545 aa8.39□□□□□ -1.07
TRIM42-201ENST00000286349 TMED1Q13445 227 aa8.39□□□□□ -1.07
TRIM42-201ENST00000286349 PTPN14Q15678 1187 aa8.39□□□□□ -1.07
TRIM42-201ENST00000286349 ARMCX5Q6P1M9 558 aa8.39□□□□□ -1.07
TRIM42-201ENST00000286349 KCNV1Q6PIU1 500 aa8.39□□□□□ -1.07
TRIM42-201ENST00000286349 MMS22LQ6ZRQ5 1243 aa8.39□□□□□ -1.07
TRIM42-201ENST00000286349 CCAR2Q8N163 923 aaKnown RBP8.39□□□□□ -1.07
TRIM42-201ENST00000286349 TMEM60Q9H2L4 133 aa8.39□□□□□ -1.07
TRIM42-201ENST00000286349 GPCPD1Q9NPB8 672 aa8.39□□□□□ -1.07
TRIM42-201ENST00000286349 KBTBD4Q9NVX7 518 aa8.39□□□□□ -1.07
TRIM42-201ENST00000286349 FAM53CQ9NYF3 392 aa8.39□□□□□ -1.07
TRIM42-201ENST00000286349 HERC5Q9UII4 1024 aaKnown RBP8.39□□□□□ -1.07
TRIM42-201ENST00000286349 CFAP69A5D8W1 941 aa8.38□□□□□ -1.07
TRIM42-201ENST00000286349 ADAMTS3O15072 1205 aa8.38□□□□□ -1.07
TRIM42-201ENST00000286349 KCNA2P16389 499 aa8.38□□□□□ -1.07
TRIM42-201ENST00000286349 SLC1A4P43007 532 aa8.38□□□□□ -1.07
TRIM42-201ENST00000286349 GRIK3Q13003 919 aa8.38□□□□□ -1.07
TRIM42-201ENST00000286349 PRKG1Q13976 671 aa8.38□□□□□ -1.07
TRIM42-201ENST00000286349 NR1I3Q14994 352 aa8.38□□□□□ -1.07
TRIM42-201ENST00000286349 KARSQ15046 597 aaKnown RBP8.38□□□□□ -1.07
TRIM42-201ENST00000286349 CALCRLQ16602 461 aa8.38□□□□□ -1.07
TRIM42-201ENST00000286349 HHATQ5VTY9 493 aa8.38□□□□□ -1.07
TRIM42-201ENST00000286349 CDKAL1Q5VV42 579 aa8.38□□□□□ -1.07
TRIM42-201ENST00000286349 TTC30BQ8N4P2 665 aa8.38□□□□□ -1.07
TRIM42-201ENST00000286349 IGSF22Q8N9C0 903 aa8.38□□□□□ -1.07
TRIM42-201ENST00000286349 NOC3LQ8WTT2 800 aaKnown RBP8.38□□□□□ -1.07
TRIM42-201ENST00000286349 BHMTQ93088 406 aa8.38□□□□□ -1.07
TRIM42-201ENST00000286349 PLEKHG4BQ96PX9 1271 aa8.38□□□□□ -1.07
TRIM42-201ENST00000286349 BIN2Q9UBW5 565 aaPredicted RBP8.38□□□□□ -1.07
TRIM42-201ENST00000286349 STK17AQ9UEE5 414 aa8.38□□□□□ -1.07
TRIM42-201ENST00000286349 ZNF112Q9UJU3 913 aa8.38□□□□□ -1.07
TRIM42-201ENST00000286349 SIPA1L1O43166 1804 aa8.38□□□□□ -1.07
TRIM42-201ENST00000286349 POLR2AP24928 1970 aaKnown RBP8.38□□□□□ -1.07
TRIM42-201ENST00000286349 GOLGA6L9A6NEM1 432 aa8.38□□□□□ -1.07
TRIM42-201ENST00000286349 ARHGAP6O43182 974 aa8.38□□□□□ -1.07
TRIM42-201ENST00000286349 RHOBTB3O94955 611 aa8.38□□□□□ -1.07
TRIM42-201ENST00000286349 CLK2P49760 499 aaKnown RBP8.38□□□□□ -1.07
TRIM42-201ENST00000286349 ATP2B2Q01814 1243 aa8.38□□□□□ -1.07
TRIM42-201ENST00000286349 TBX2Q13207 712 aaPredicted RBP8.38□□□□□ -1.07
TRIM42-201ENST00000286349 ABCB5Q2M3G0 1257 aa8.38□□□□□ -1.07
TRIM42-201ENST00000286349 CEP135Q66GS9 1140 aa8.38□□□□□ -1.07
TRIM42-201ENST00000286349 SYT10Q6XYQ8 523 aa8.38□□□□□ -1.07
TRIM42-201ENST00000286349 OTUD6AQ7L8S5 288 aa8.38□□□□□ -1.07
TRIM42-201ENST00000286349 GMCL1Q96IK5 515 aa8.38□□□□□ -1.07
TRIM42-201ENST00000286349 C16orf45Q96MC5 204 aaPredicted RBP8.38□□□□□ -1.07
TRIM42-201ENST00000286349 MTMR9Q96QG7 549 aa8.38□□□□□ -1.07
TRIM42-201ENST00000286349 NAA15Q9BXJ9 866 aaKnown RBP8.38□□□□□ -1.07
TRIM42-201ENST00000286349 CPVLQ9H3G5 476 aa8.38□□□□□ -1.07
TRIM42-201ENST00000286349 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.38□□□□□ -1.07
TRIM42-201ENST00000286349 SPATS2LQ9NUQ6 558 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms