RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 ELP1O95163 1332 aa7.43□□□□□ -1.22
CD44-204ENST00000279452 SMCHD1A6NHR9 2005 aa7.42□□□□□ -1.22
CD44-204ENST00000279452 BAZ2BQ9UIF8 2168 aaKnown RBP7.42□□□□□ -1.22
CD44-204ENST00000279452 A6NJR5 290 aa7.42□□□□□ -1.22
CD44-204ENST00000279452 FAM86B1E9PN63 330 aa7.42□□□□□ -1.22
CD44-204ENST00000279452 H0YGN5 161 aa7.42□□□□□ -1.22
CD44-204ENST00000279452 H3BQV1 296 aa7.42□□□□□ -1.22
CD44-204ENST00000279452 ARVCFO00192 962 aa7.42□□□□□ -1.22
CD44-204ENST00000279452 CHMP2AO43633 222 aa7.42□□□□□ -1.22
CD44-204ENST00000279452 KPNA6O60684 536 aa7.42□□□□□ -1.22
CD44-204ENST00000279452 ATP9AO75110 1047 aa7.42□□□□□ -1.22
CD44-204ENST00000279452 MMP1P03956 469 aa7.42□□□□□ -1.22
CD44-204ENST00000279452 HSP90AA1P07900 732 aaKnown RBP7.42□□□□□ -1.22
CD44-204ENST00000279452 FAM86B2P0C5J1 330 aa7.42□□□□□ -1.22
CD44-204ENST00000279452 ARP10275 920 aa7.42□□□□□ -1.22
CD44-204ENST00000279452 ATP2B1P20020 1258 aa7.42□□□□□ -1.22
CD44-204ENST00000279452 GJB2P29033 226 aa7.42□□□□□ -1.22
CD44-204ENST00000279452 ICAM3P32942 547 aa7.42□□□□□ -1.22
CD44-204ENST00000279452 TLE2Q04725 743 aa7.42□□□□□ -1.22
CD44-204ENST00000279452 SEMA3FQ13275 785 aa7.42□□□□□ -1.22
CD44-204ENST00000279452 NR5A1Q13285 461 aa7.42□□□□□ -1.22
CD44-204ENST00000279452 HSDL1Q3SXM5 330 aa7.42□□□□□ -1.22
CD44-204ENST00000279452 MYSM1Q5VVJ2 828 aa7.42□□□□□ -1.22
CD44-204ENST00000279452 MCTP1Q6DN14 999 aa7.42□□□□□ -1.22
CD44-204ENST00000279452 CCSAPQ6IQ19 270 aaPredicted RBP7.42□□□□□ -1.22
CD44-204ENST00000279452 HSCBQ8IWL3 235 aa7.42□□□□□ -1.22
CD44-204ENST00000279452 FAM177A1Q8N128 213 aaPredicted RBP7.42□□□□□ -1.22
CD44-204ENST00000279452 C7orf31Q8N865 590 aa7.42□□□□□ -1.22
CD44-204ENST00000279452 IL27Q8NEV9 243 aa7.42□□□□□ -1.22
CD44-204ENST00000279452 GLG1Q92896 1179 aa7.42□□□□□ -1.22
CD44-204ENST00000279452 LBHD1Q9BQE6 289 aaPredicted RBP7.42□□□□□ -1.22
CD44-204ENST00000279452 KATNAL1Q9BW62 490 aa7.42□□□□□ -1.22
CD44-204ENST00000279452 AGO4Q9HCK5 861 aaKnown RBP7.42□□□□□ -1.22
CD44-204ENST00000279452 JPH1Q9HDC5 661 aaPredicted RBP7.42□□□□□ -1.22
CD44-204ENST00000279452 TMEM39AQ9NV64 488 aa7.42□□□□□ -1.22
CD44-204ENST00000279452 PCDH10Q9P2E7 1040 aa7.42□□□□□ -1.22
CD44-204ENST00000279452 ZNF215Q9UL58 517 aaPredicted RBP7.42□□□□□ -1.22
CD44-204ENST00000279452 SAMM50Q9Y512 469 aa7.42□□□□□ -1.22
CD44-204ENST00000279452 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.42□□□□□ -1.22
CD44-204ENST00000279452 MROH7Q68CQ1 1323 aa7.42□□□□□ -1.22
CD44-204ENST00000279452 MCM3APO60318 1980 aa7.42□□□□□ -1.22
CD44-204ENST00000279452 HTTP42858 3142 aa7.42□□□□□ -1.22
CD44-204ENST00000279452 BTBD18B2RXH4 712 aa7.41□□□□□ -1.22
CD44-204ENST00000279452 K7ELQ4 463 aaPredicted RBP7.41□□□□□ -1.22
CD44-204ENST00000279452 IPO5O00410 1097 aaKnown RBP7.41□□□□□ -1.22
CD44-204ENST00000279452 BACH1O14867 736 aa7.41□□□□□ -1.22
CD44-204ENST00000279452 MAFGO15525 162 aa7.41□□□□□ -1.22
CD44-204ENST00000279452 CCNT1O60563 726 aaKnown RBP7.41□□□□□ -1.22
CD44-204ENST00000279452 TDP2O95551 362 aa7.41□□□□□ -1.22
CD44-204ENST00000279452 LGALS2P05162 132 aa7.41□□□□□ -1.22
CD44-204ENST00000279452 CYP3A4P08684 503 aa7.41□□□□□ -1.22
CD44-204ENST00000279452 CLTBP09497 229 aa7.41□□□□□ -1.22
CD44-204ENST00000279452 KCNA2P16389 499 aa7.41□□□□□ -1.22
CD44-204ENST00000279452 MARK3P27448 753 aa7.41□□□□□ -1.22
CD44-204ENST00000279452 TCF7P36402 384 aaPredicted RBP7.41□□□□□ -1.22
CD44-204ENST00000279452 PSEN2P49810 448 aa7.41□□□□□ -1.22
CD44-204ENST00000279452 MFSD10Q14728 455 aa7.41□□□□□ -1.22
CD44-204ENST00000279452 KIAA0753Q2KHM9 967 aa7.41□□□□□ -1.22
CD44-204ENST00000279452 NBPF20Q3BBV1 942 aa7.41□□□□□ -1.22
CD44-204ENST00000279452 NIPA1Q7RTP0 329 aa7.41□□□□□ -1.22
CD44-204ENST00000279452 NEK8Q86SG6 692 aa7.41□□□□□ -1.22
CD44-204ENST00000279452 TRIM50Q86XT4 487 aa7.41□□□□□ -1.22
CD44-204ENST00000279452 EMID1Q96A84 441 aaPredicted RBP7.41□□□□□ -1.22
CD44-204ENST00000279452 GPR20Q99678 358 aa7.41□□□□□ -1.22
CD44-204ENST00000279452 SENP7Q9BQF6 1050 aa7.41□□□□□ -1.22
CD44-204ENST00000279452 PPP1R12CQ9BZL4 782 aa7.41□□□□□ -1.22
CD44-204ENST00000279452 AZI2Q9H6S1 392 aa7.41□□□□□ -1.22
CD44-204ENST00000279452 BCAS3Q9H6U6 928 aa7.41□□□□□ -1.22
CD44-204ENST00000279452 SLC9A2Q9UBY0 812 aa7.41□□□□□ -1.22
CD44-204ENST00000279452 DDX25Q9UHL0 483 aaKnown RBP7.41□□□□□ -1.22
CD44-204ENST00000279452 IGLV3-22A0A075B6J6 115 aa7.4□□□□□ -1.22
CD44-204ENST00000279452 FAM205CA6NFA0 338 aa7.4□□□□□ -1.22
CD44-204ENST00000279452 H3BRB1 525 aa7.4□□□□□ -1.22
CD44-204ENST00000279452 MEIS1O00470 390 aa7.4□□□□□ -1.22
CD44-204ENST00000279452 B4GALT4O60513 344 aa7.4□□□□□ -1.22
CD44-204ENST00000279452 GAS7O60861 476 aa7.4□□□□□ -1.22
CD44-204ENST00000279452 PPFIA4O75335 1185 aa7.4□□□□□ -1.22
CD44-204ENST00000279452 F2P00734 622 aa7.4□□□□□ -1.22
CD44-204ENST00000279452 RAG1P15918 1043 aa7.4□□□□□ -1.22
CD44-204ENST00000279452 USP11P51784 963 aa7.4□□□□□ -1.22
CD44-204ENST00000279452 ACTR2P61160 394 aa7.4□□□□□ -1.22
CD44-204ENST00000279452 NKX3-2P78367 333 aa7.4□□□□□ -1.22
CD44-204ENST00000279452 MDM2Q00987 491 aaPredicted RBP7.4□□□□□ -1.22
CD44-204ENST00000279452 ITGB3BPQ13352 177 aaPredicted RBP7.4□□□□□ -1.22
CD44-204ENST00000279452 SNX17Q15036 470 aa7.4□□□□□ -1.22
CD44-204ENST00000279452 NPY5RQ15761 445 aa7.4□□□□□ -1.22
CD44-204ENST00000279452 PRPF38BQ5VTL8 546 aaKnown RBP7.4□□□□□ -1.22
CD44-204ENST00000279452 LRCH2Q5VUJ6 765 aa7.4□□□□□ -1.22
CD44-204ENST00000279452 MIS18BP1Q6P0N0 1132 aa7.4□□□□□ -1.22
CD44-204ENST00000279452 CHRDL2Q6WN34 429 aa7.4□□□□□ -1.22
CD44-204ENST00000279452 TRMT1LQ7Z2T5 733 aaKnown RBP7.4□□□□□ -1.22
CD44-204ENST00000279452 CKAP2LQ8IYA6 745 aa7.4□□□□□ -1.22
CD44-204ENST00000279452 SEPT1Q8WYJ6 367 aa7.4□□□□□ -1.22
CD44-204ENST00000279452 GJA10Q969M2 543 aa7.4□□□□□ -1.22
CD44-204ENST00000279452 NAP1L4Q99733 375 aaKnown RBP7.4□□□□□ -1.22
CD44-204ENST00000279452 TEKT3Q9BXF9 490 aa7.4□□□□□ -1.22
CD44-204ENST00000279452 TRPV6Q9H1D0 765 aa7.4□□□□□ -1.22
CD44-204ENST00000279452 TUT1Q9H6E5 874 aaKnown RBP7.4□□□□□ -1.22
CD44-204ENST00000279452 PDLIM7Q9NR12 457 aa7.4□□□□□ -1.22
CD44-204ENST00000279452 TBC1D22BQ9NU19 505 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms