RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 NBNO60934 754 aa14.34□□□□□ -0.11
MRPS28-201ENST00000276585 PARNO95453 639 aaKnown RBP14.34□□□□□ -0.11
MRPS28-201ENST00000276585 CTC1Q2NKJ3 1217 aa14.34□□□□□ -0.11
MRPS28-201ENST00000276585 TMEM192Q8IY95 271 aa14.34□□□□□ -0.11
MRPS28-201ENST00000276585 ASIC4Q96FT7 647 aa14.34□□□□□ -0.11
MRPS28-201ENST00000276585 LSG1Q9H089 658 aaKnown RBP14.34□□□□□ -0.11
MRPS28-201ENST00000276585 SENP2Q9HC62 589 aa14.34□□□□□ -0.11
MRPS28-201ENST00000276585 WDR19Q8NEZ3 1342 aa14.34□□□□□ -0.11
MRPS28-201ENST00000276585 TRIP12Q14669 1992 aaPredicted RBP14.33□□□□□ -0.12
MRPS28-201ENST00000276585 TBX10O75333 385 aa14.33□□□□□ -0.12
MRPS28-201ENST00000276585 CSPG5O95196 566 aa14.33□□□□□ -0.12
MRPS28-201ENST00000276585 CXCL10P02778 98 aa14.33□□□□□ -0.12
MRPS28-201ENST00000276585 AMHP03971 560 aa14.33□□□□□ -0.12
MRPS28-201ENST00000276585 ANTXR2P58335 489 aa14.33□□□□□ -0.12
MRPS28-201ENST00000276585 HYAL1Q12794 435 aa14.33□□□□□ -0.12
MRPS28-201ENST00000276585 SLC35G1Q2M3R5 365 aa14.33□□□□□ -0.12
MRPS28-201ENST00000276585 CCDC178Q5BJE1 867 aa14.33□□□□□ -0.12
MRPS28-201ENST00000276585 BMP2KLQ5H9B9 411 aa14.33□□□□□ -0.12
MRPS28-201ENST00000276585 GPATCH4Q5T3I0 446 aaKnown RBP14.33□□□□□ -0.12
MRPS28-201ENST00000276585 MCTP2Q6DN12 878 aa14.33□□□□□ -0.12
MRPS28-201ENST00000276585 SLC30A10Q6XR72 485 aa14.33□□□□□ -0.12
MRPS28-201ENST00000276585 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.33□□□□□ -0.12
MRPS28-201ENST00000276585 FBXO11Q86XK2 927 aa14.33□□□□□ -0.12
MRPS28-201ENST00000276585 SP7Q8TDD2 431 aaPredicted RBP14.33□□□□□ -0.12
MRPS28-201ENST00000276585 RMDN1Q96DB5 314 aa14.33□□□□□ -0.12
MRPS28-201ENST00000276585 YME1L1Q96TA2 773 aa14.33□□□□□ -0.12
MRPS28-201ENST00000276585 ESYT1Q9BSJ8 1104 aa14.33□□□□□ -0.12
MRPS28-201ENST00000276585 WDR11Q9BZH6 1224 aa14.33□□□□□ -0.12
MRPS28-201ENST00000276585 UBA5Q9GZZ9 404 aa14.33□□□□□ -0.12
MRPS28-201ENST00000276585 KAT14Q9H8E8 782 aa14.33□□□□□ -0.12
MRPS28-201ENST00000276585 RBM8AQ9Y5S9 174 aaKnown RBP14.33□□□□□ -0.12
MRPS28-201ENST00000276585 LOC730098B7Z3J9 87 aa14.32□□□□□ -0.12
MRPS28-201ENST00000276585 E7EWF7 191 aa14.32□□□□□ -0.12
MRPS28-201ENST00000276585 NDUFV1P49821 464 aa14.32□□□□□ -0.12
MRPS28-201ENST00000276585 HTRA4P83105 476 aaPredicted RBP14.32□□□□□ -0.12
MRPS28-201ENST00000276585 POTEHQ6S545 545 aa14.32□□□□□ -0.12
MRPS28-201ENST00000276585 NSMFQ6X4W1 530 aa14.32□□□□□ -0.12
MRPS28-201ENST00000276585 MB21D2Q8IYB1 491 aaPredicted RBP14.32□□□□□ -0.12
MRPS28-201ENST00000276585 MORC4Q8TE76 937 aa14.32□□□□□ -0.12
MRPS28-201ENST00000276585 UBAC1Q9BSL1 405 aa14.32□□□□□ -0.12
MRPS28-201ENST00000276585 SCN10AQ9Y5Y9 1956 aa14.32□□□□□ -0.12
MRPS28-201ENST00000276585 DNAH14Q0VDD8 3507 aa14.32□□□□□ -0.12
MRPS28-201ENST00000276585 LINC01565O15544 149 aa14.31□□□□□ -0.12
MRPS28-201ENST00000276585 KPNA6O60684 536 aa14.31□□□□□ -0.12
MRPS28-201ENST00000276585 PDGFBP01127 241 aaPredicted RBP14.31□□□□□ -0.12
MRPS28-201ENST00000276585 GTF2F1P35269 517 aaKnown RBP eCLIP14.31□□□□□ -0.12
MRPS28-201ENST00000276585 BAATQ14032 418 aaPredicted RBP14.31□□□□□ -0.12
MRPS28-201ENST00000276585 CDC37Q16543 378 aaPredicted RBP14.31□□□□□ -0.12
MRPS28-201ENST00000276585 ASPRV1Q53RT3 343 aa14.31□□□□□ -0.12
MRPS28-201ENST00000276585 STAG2Q8N3U4 1231 aa14.31□□□□□ -0.12
MRPS28-201ENST00000276585 CHD8Q9HCK8 2581 aa14.31□□□□□ -0.12
MRPS28-201ENST00000276585 ACACBO00763 2458 aa14.31□□□□□ -0.12
MRPS28-201ENST00000276585 RBAK-RBAKDNI3L0D1 243 aa14.3□□□□□ -0.12
MRPS28-201ENST00000276585 CKBP12277 381 aa14.3□□□□□ -0.12
MRPS28-201ENST00000276585 CBX2Q14781 532 aaPredicted RBP14.3□□□□□ -0.12
MRPS28-201ENST00000276585 IFIT1BQ5T764 474 aaKnown RBP14.3□□□□□ -0.12
MRPS28-201ENST00000276585 GDF6Q6KF10 455 aaPredicted RBP14.3□□□□□ -0.12
MRPS28-201ENST00000276585 ZBTB33Q86T24 672 aa14.3□□□□□ -0.12
MRPS28-201ENST00000276585 ADGRF4Q8IZF3 695 aa14.3□□□□□ -0.12
MRPS28-201ENST00000276585 MTMR8Q96EF0 704 aa14.3□□□□□ -0.12
MRPS28-201ENST00000276585 RPGRIP1Q96KN7 1286 aa14.3□□□□□ -0.12
MRPS28-201ENST00000276585 JMJD4Q9H9V9 463 aa14.3□□□□□ -0.12
MRPS28-201ENST00000276585 MAD2L2Q9UI95 211 aa14.3□□□□□ -0.12
MRPS28-201ENST00000276585 WDR87Q6ZQQ6 2873 aa14.29□□□□□ -0.12
MRPS28-201ENST00000276585 PPP1R11O60927 126 aaPredicted RBP14.29□□□□□ -0.12
MRPS28-201ENST00000276585 UPP2O95045 317 aa14.29□□□□□ -0.12
MRPS28-201ENST00000276585 PARP1P09874 1014 aaKnown RBP14.29□□□□□ -0.12
MRPS28-201ENST00000276585 CTNNB1P35222 781 aa14.29□□□□□ -0.12
MRPS28-201ENST00000276585 ALDH5A1P51649 535 aaPredicted RBP14.29□□□□□ -0.12
MRPS28-201ENST00000276585 RPS6P62753 249 aaKnown RBP14.29□□□□□ -0.12
MRPS28-201ENST00000276585 QRICH1Q2TAL8 776 aa14.29□□□□□ -0.12
MRPS28-201ENST00000276585 USH1GQ495M9 461 aa14.29□□□□□ -0.12
MRPS28-201ENST00000276585 CHST3Q7LGC8 479 aa14.29□□□□□ -0.12
MRPS28-201ENST00000276585 DHX38Q92620 1227 aaKnown RBP14.29□□□□□ -0.12
MRPS28-201ENST00000276585 RIPOR3Q96MK2 946 aa14.29□□□□□ -0.12
MRPS28-201ENST00000276585 LMAN2LQ9H0V9 348 aa14.29□□□□□ -0.12
MRPS28-201ENST00000276585 DMXL1Q9Y485 3027 aa14.28□□□□□ -0.12
MRPS28-201ENST00000276585 PALM3A6NDB9 673 aaPredicted RBP14.28□□□□□ -0.12
MRPS28-201ENST00000276585 OPLAHO14841 1288 aa14.28□□□□□ -0.12
MRPS28-201ENST00000276585 SLC27A2O14975 620 aa14.28□□□□□ -0.12
MRPS28-201ENST00000276585 LGR5O75473 907 aa14.28□□□□□ -0.12
MRPS28-201ENST00000276585 EYA4O95677 639 aa14.28□□□□□ -0.12
MRPS28-201ENST00000276585 EDNRBP24530 442 aa14.28□□□□□ -0.12
MRPS28-201ENST00000276585 EP300Q09472 2414 aaPredicted RBP14.28□□□□□ -0.12
MRPS28-201ENST00000276585 TROAPQ12815 778 aa14.28□□□□□ -0.12
MRPS28-201ENST00000276585 TRDNQ13061 729 aa14.28□□□□□ -0.12
MRPS28-201ENST00000276585 GRM4Q14833 912 aa14.28□□□□□ -0.12
MRPS28-201ENST00000276585 PPP2R5BQ15173 497 aa14.28□□□□□ -0.12
MRPS28-201ENST00000276585 NECTIN1Q15223 517 aa14.28□□□□□ -0.12
MRPS28-201ENST00000276585 NCOA7Q8NI08 942 aa14.28□□□□□ -0.12
MRPS28-201ENST00000276585 IGDCC4Q8TDY8 1250 aa14.28□□□□□ -0.12
MRPS28-201ENST00000276585 TBC1D5Q92609 795 aa14.28□□□□□ -0.12
MRPS28-201ENST00000276585 COL20A1Q9P218 1284 aa14.28□□□□□ -0.12
MRPS28-201ENST00000276585 PTPDC1A2A3K4 754 aa14.27□□□□□ -0.13
MRPS28-201ENST00000276585 IFIT3O14879 490 aaKnown RBP14.27□□□□□ -0.13
MRPS28-201ENST00000276585 ICAM3P32942 547 aa14.27□□□□□ -0.13
MRPS28-201ENST00000276585 RBL2Q08999 1139 aa14.27□□□□□ -0.13
MRPS28-201ENST00000276585 ADAM15Q13444 863 aa14.27□□□□□ -0.13
MRPS28-201ENST00000276585 PUM1Q14671 1186 aaKnown RBP eCLIP14.27□□□□□ -0.13
MRPS28-201ENST00000276585 PTPN21Q16825 1174 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms