RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 VPS53Q5VIR6 699 aa9.65□□□□□ -0.86
CTDSPL-201ENST00000273179 PDXDC1Q6P996 788 aa9.65□□□□□ -0.86
CTDSPL-201ENST00000273179 CCDC62Q6P9F0 684 aa9.65□□□□□ -0.86
CTDSPL-201ENST00000273179 TXNDC2Q86VQ3 553 aa9.65□□□□□ -0.86
CTDSPL-201ENST00000273179 APLFQ8IW19 511 aaPredicted RBP9.65□□□□□ -0.86
CTDSPL-201ENST00000273179 IQUBQ8NA54 791 aa9.65□□□□□ -0.86
CTDSPL-201ENST00000273179 ST13P5Q8NFI4 369 aaPredicted RBP9.65□□□□□ -0.86
CTDSPL-201ENST00000273179 TCEANC2Q96MN5 208 aa9.65□□□□□ -0.86
CTDSPL-201ENST00000273179 AGTPBP1Q9UPW5 1226 aa9.65□□□□□ -0.86
CTDSPL-201ENST00000273179 USP16Q9Y5T5 823 aa9.65□□□□□ -0.86
CTDSPL-201ENST00000273179 KIF1BO60333 1816 aa9.65□□□□□ -0.86
CTDSPL-201ENST00000273179 PIK3C2GO75747 1445 aa9.65□□□□□ -0.86
CTDSPL-201ENST00000273179 GTPBP6O43824 516 aaPredicted RBP9.65□□□□□ -0.86
CTDSPL-201ENST00000273179 SFPQP23246 707 aaKnown RBP eCLIP9.65□□□□□ -0.868e-6■□□□□ 9
CTDSPL-201ENST00000273179 ACAT1P24752 427 aaKnown RBP9.65□□□□□ -0.86
CTDSPL-201ENST00000273179 PSMA4P25789 261 aaKnown RBP9.65□□□□□ -0.86
CTDSPL-201ENST00000273179 ZNF746Q6NUN9 644 aaPredicted RBP9.65□□□□□ -0.86
CTDSPL-201ENST00000273179 PASD1Q8IV76 773 aa9.65□□□□□ -0.86
CTDSPL-201ENST00000273179 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.65□□□□□ -0.86
CTDSPL-201ENST00000273179 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.65□□□□□ -0.86
CTDSPL-201ENST00000273179 IFT74Q96LB3 600 aa9.65□□□□□ -0.86
CTDSPL-201ENST00000273179 PREBQ9HCU5 417 aa9.65□□□□□ -0.86
CTDSPL-201ENST00000273179 SEC63Q9UGP8 760 aaKnown RBP9.65□□□□□ -0.86
CTDSPL-201ENST00000273179 NKTRP30414 1462 aaKnown RBP9.65□□□□□ -0.86
CTDSPL-201ENST00000273179 M0QX08 132 aa9.65□□□□□ -0.87
CTDSPL-201ENST00000273179 NVLO15381 856 aaKnown RBP9.65□□□□□ -0.87
CTDSPL-201ENST00000273179 PDGFRBP09619 1106 aa9.65□□□□□ -0.87
CTDSPL-201ENST00000273179 CCDC192P0DO97 292 aa9.65□□□□□ -0.87
CTDSPL-201ENST00000273179 CCT8P50990 548 aa9.65□□□□□ -0.87
CTDSPL-201ENST00000273179 RARSP54136 660 aaKnown RBP9.65□□□□□ -0.87
CTDSPL-201ENST00000273179 POLA2Q14181 598 aa9.65□□□□□ -0.87
CTDSPL-201ENST00000273179 OLFML2BQ68BL8 750 aa9.65□□□□□ -0.87
CTDSPL-201ENST00000273179 IL31Q6EBC2 164 aa9.65□□□□□ -0.87
CTDSPL-201ENST00000273179 RFX8Q6ZV50 586 aa9.65□□□□□ -0.87
CTDSPL-201ENST00000273179 FAM186BQ8IYM0 893 aa9.65□□□□□ -0.87
CTDSPL-201ENST00000273179 LRRC47Q8N1G4 583 aaKnown RBP9.65□□□□□ -0.87
CTDSPL-201ENST00000273179 CNNM3Q8NE01 707 aa9.65□□□□□ -0.87
CTDSPL-201ENST00000273179 CCT6BQ92526 530 aa9.65□□□□□ -0.87
CTDSPL-201ENST00000273179 EHD2Q9NZN4 543 aa9.65□□□□□ -0.87
CTDSPL-201ENST00000273179 IQGAP1P46940 1657 aa9.65□□□□□ -0.87
CTDSPL-201ENST00000273179 KPNA6O60684 536 aa9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 CLASP2O75122 1294 aaKnown RBP9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 CEBPAP49715 358 aaPredicted RBP9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 ZNF445P59923 1031 aa9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 CD83Q01151 205 aa9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 BRDTQ58F21 947 aaPredicted RBP9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 SPERTQ8NA61 448 aa9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 CCHCR1Q8TD31 782 aa9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 OSBP2Q969R2 916 aa9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 COG8Q96MW5 612 aa9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 CASS4Q9NQ75 786 aa9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 TCF7L2Q9NQB0 619 aa9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 CHST12Q9NRB3 414 aa9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 DDX18Q9NVP1 670 aaKnown RBP9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 RIMBP3CA6NJZ7 1639 aa9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 RIMBP3BA6NNM3 1639 aa9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 RIMBP3Q9UFD9 1639 aa9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 ACTN4O43707 911 aaKnown RBP9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 EPB42P16452 691 aa9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 HSPA6P17066 643 aa9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 SULT1E1P49888 294 aa9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 NKX1-1Q15270 411 aaPredicted RBP9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 HIBCHQ6NVY1 386 aaPredicted RBP9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 POMZP3Q6PJE2 187 aa9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 YME1L1Q96TA2 773 aa9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 SH2D4AQ9H788 454 aa9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 SERPINI2O75830 405 aa9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 CD9P21926 228 aa9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 EVI2BP34910 448 aa9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 CLCN6P51797 869 aa9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 PABPC4Q13310 644 aaKnown RBP eCLIP9.64□□□□□ -0.874e-13■■■■■ 31.7
CTDSPL-201ENST00000273179 LAMC2Q13753 1193 aa9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 ARHGAP44Q17R89 818 aa9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 ERCC6LQ2NKX8 1250 aa9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 FHDC1Q9C0D6 1143 aaPredicted RBP9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 AVENQ9NQS1 362 aaPredicted RBP9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 DIP2CQ9Y2E4 1556 aa9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 ABCC11Q96J66 1382 aa9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 UBA7P41226 1012 aa9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 TSGA10IPQ3SY00 556 aa9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 USH1GQ495M9 461 aa9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 PRPF40BQ6NWY9 871 aaKnown RBP9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 MAML1Q92585 1016 aa9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 TTC17Q96AE7 1141 aa9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 CCDC177Q9NQR7 707 aaPredicted RBP9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 USP40Q9NVE5 1235 aa9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 NOP53Q9NZM5 478 aaKnown RBP9.64□□□□□ -0.87
CTDSPL-201ENST00000273179 ABLIM1O14639 778 aa9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 POLR3DP05423 398 aaPredicted RBP9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 SMAD4Q13485 552 aaKnown RBP9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 VWA3BQ502W6 1294 aa9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 OR8K1Q8NGG5 319 aa9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 HNRNPABQ99729 332 aaKnown RBP9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 OSBPL2Q9H1P3 480 aa9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 CYLDQ9NQC7 956 aa9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 PIH1D1Q9NWS0 290 aaKnown RBP9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 ZFATQ9P243 1243 aa9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 STK38LQ9Y2H1 464 aa9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 GAKO14976 1311 aa9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 CCDC163A0A0D9SF12 145 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms