RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 SETQ01105 290 aaPredicted RBP13.55□□□□□ -0.24
SDE2-201ENST00000272091 TKFCQ3LXA3 575 aa13.55□□□□□ -0.24
SDE2-201ENST00000272091 COBLL1Q53SF7 1204 aa13.55□□□□□ -0.24
SDE2-201ENST00000272091 ANKRD13AQ8IZ07 590 aa13.55□□□□□ -0.24
SDE2-201ENST00000272091 GLIS3Q8NEA6 775 aa13.55□□□□□ -0.24
SDE2-201ENST00000272091 POLR3CQ9BUI4 534 aaPredicted RBP13.55□□□□□ -0.24
SDE2-201ENST00000272091 EXOC1Q9NV70 894 aa13.55□□□□□ -0.24
SDE2-201ENST00000272091 BTBD7Q9P203 1132 aa13.55□□□□□ -0.24
SDE2-201ENST00000272091 DOCK5Q9H7D0 1870 aa13.55□□□□□ -0.24
SDE2-201ENST00000272091 PVALEFA0A1B0GWK0 134 aa13.55□□□□□ -0.24
SDE2-201ENST00000272091 GRIN3BO60391 1043 aa13.55□□□□□ -0.24
SDE2-201ENST00000272091 CYP11B2P19099 503 aa13.55□□□□□ -0.24
SDE2-201ENST00000272091 ITGB3BPQ13352 177 aaPredicted RBP13.55□□□□□ -0.24
SDE2-201ENST00000272091 HAUS3Q68CZ6 603 aa13.55□□□□□ -0.24
SDE2-201ENST00000272091 NSMFQ6X4W1 530 aa13.55□□□□□ -0.24
SDE2-201ENST00000272091 IRF2BP1Q8IU81 584 aa13.55□□□□□ -0.24
SDE2-201ENST00000272091 PDCD2LQ9BRP1 358 aa13.55□□□□□ -0.24
SDE2-201ENST00000272091 ZNF577Q9BSK1 485 aa13.55□□□□□ -0.24
SDE2-201ENST00000272091 KCNH7Q9NS40 1196 aa13.55□□□□□ -0.24
SDE2-201ENST00000272091 PNMA2Q9UL42 364 aa13.55□□□□□ -0.24
SDE2-201ENST00000272091 KCNH4Q9UQ05 1017 aa13.55□□□□□ -0.24
SDE2-201ENST00000272091 CTDP1Q9Y5B0 961 aaPredicted RBP13.55□□□□□ -0.24
SDE2-201ENST00000272091 SERPINC1P01008 464 aa13.55□□□□□ -0.24
SDE2-201ENST00000272091 NIPA1Q7RTP0 329 aa13.55□□□□□ -0.24
SDE2-201ENST00000272091 ERO1BQ86YB8 467 aa13.55□□□□□ -0.24
SDE2-201ENST00000272091 DUSP9Q99956 384 aaKnown RBP13.55□□□□□ -0.24
SDE2-201ENST00000272091 FGFBP2Q9BYJ0 223 aa13.55□□□□□ -0.24
SDE2-201ENST00000272091 RABGAP1Q9Y3P9 1069 aa13.55□□□□□ -0.24
SDE2-201ENST00000272091 WDR81Q562E7 1941 aa13.54□□□□□ -0.24
SDE2-201ENST00000272091 SLITRK3O94933 977 aa13.54□□□□□ -0.24
SDE2-201ENST00000272091 CYP4A11Q02928 519 aa13.54□□□□□ -0.24
SDE2-201ENST00000272091 TTI2Q6NXR4 508 aa13.54□□□□□ -0.24
SDE2-201ENST00000272091 HOXC10Q9NYD6 342 aa13.54□□□□□ -0.24
SDE2-201ENST00000272091 PCDHA2Q9Y5H9 948 aa13.54□□□□□ -0.24
SDE2-201ENST00000272091 GOLGA6L6A8MZA4 724 aa13.54□□□□□ -0.24
SDE2-201ENST00000272091 IPO5O00410 1097 aaKnown RBP13.54□□□□□ -0.24
SDE2-201ENST00000272091 CHMP2AO43633 222 aa13.54□□□□□ -0.24
SDE2-201ENST00000272091 ZNF500O60304 480 aaPredicted RBP13.54□□□□□ -0.24
SDE2-201ENST00000272091 HOXA7P31268 230 aaPredicted RBP13.54□□□□□ -0.24
SDE2-201ENST00000272091 TEX13BQ9BXU2 312 aa13.54□□□□□ -0.24
SDE2-201ENST00000272091 R3HDMLQ9H3Y0 253 aa13.54□□□□□ -0.24
SDE2-201ENST00000272091 AGO4Q9HCK5 861 aaKnown RBP13.54□□□□□ -0.24
SDE2-201ENST00000272091 SLC39A2Q9NP94 309 aa13.54□□□□□ -0.24
SDE2-201ENST00000272091 JADE2Q9NQC1 790 aa13.54□□□□□ -0.24
SDE2-201ENST00000272091 A0A1B0GTH6 734 aa13.54□□□□□ -0.24
SDE2-201ENST00000272091 TRAF5O00463 557 aa13.54□□□□□ -0.24
SDE2-201ENST00000272091 CNMDO75829 334 aa13.54□□□□□ -0.24
SDE2-201ENST00000272091 LBX2Q6XYB7 198 aa13.54□□□□□ -0.24
SDE2-201ENST00000272091 TMC6Q7Z403 805 aa13.54□□□□□ -0.24
SDE2-201ENST00000272091 VSTM4Q8IW00 320 aa13.54□□□□□ -0.24
SDE2-201ENST00000272091 C17orf53Q8N3J3 647 aaPredicted RBP13.54□□□□□ -0.24
SDE2-201ENST00000272091 PROCA1Q8NCQ7 364 aaPredicted RBP13.54□□□□□ -0.24
SDE2-201ENST00000272091 DYDC2Q96IM9 177 aa13.54□□□□□ -0.24
SDE2-201ENST00000272091 RMDN3Q96TC7 470 aa13.54□□□□□ -0.24
SDE2-201ENST00000272091 A1CFQ9NQ94 594 aaKnown RBP13.54□□□□□ -0.24
SDE2-201ENST00000272091 CYP39A1Q9NYL5 469 aa13.54□□□□□ -0.24
SDE2-201ENST00000272091 ASTN1O14525 1302 aa13.53□□□□□ -0.24
SDE2-201ENST00000272091 GAS7O60861 476 aa13.53□□□□□ -0.24
SDE2-201ENST00000272091 CLCN1P35523 988 aa13.53□□□□□ -0.24
SDE2-201ENST00000272091 CACNB1Q02641 598 aaPredicted RBP13.53□□□□□ -0.24
SDE2-201ENST00000272091 COASYQ13057 564 aa13.53□□□□□ -0.24
SDE2-201ENST00000272091 CTTNQ14247 550 aaKnown RBP13.53□□□□□ -0.24
SDE2-201ENST00000272091 LDLRAD1Q5T700 205 aa13.53□□□□□ -0.24
SDE2-201ENST00000272091 ERMNQ8TAM6 284 aa13.53□□□□□ -0.24
SDE2-201ENST00000272091 FRMD3A2A2Y4 597 aa13.53□□□□□ -0.24
SDE2-201ENST00000272091 IQCA1LA6NCM1 817 aa13.53□□□□□ -0.24
SDE2-201ENST00000272091 ZBTB39O15060 712 aa13.53□□□□□ -0.24
SDE2-201ENST00000272091 PPIL2Q13356 520 aa13.53□□□□□ -0.24
SDE2-201ENST00000272091 NR1I3Q14994 352 aa13.53□□□□□ -0.24
SDE2-201ENST00000272091 ARMCX5Q6P1M9 558 aa13.53□□□□□ -0.24
SDE2-201ENST00000272091 GADL1Q6ZQY3 521 aa13.53□□□□□ -0.24
SDE2-201ENST00000272091 FILIP1Q7Z7B0 1213 aa13.53□□□□□ -0.24
SDE2-201ENST00000272091 GPBP1Q86WP2 473 aa13.53□□□□□ -0.24
SDE2-201ENST00000272091 OPTNQ96CV9 577 aa13.53□□□□□ -0.24
SDE2-201ENST00000272091 SEMA6BQ9H3T3 888 aa13.53□□□□□ -0.24
SDE2-201ENST00000272091 LOXHD1Q8IVV2 1947 aa13.53□□□□□ -0.24
SDE2-201ENST00000272091 TPM3P06753 285 aa13.53□□□□□ -0.24
SDE2-201ENST00000272091 PABPC4Q13310 644 aaKnown RBP eCLIP13.53□□□□□ -0.241e-6■■■■■ 56.2
SDE2-201ENST00000272091 SYT2Q8N9I0 419 aaPredicted RBP13.53□□□□□ -0.24
SDE2-201ENST00000272091 BCAS3Q9H6U6 928 aa13.53□□□□□ -0.24
SDE2-201ENST00000272091 PKD2L1Q9P0L9 805 aa13.53□□□□□ -0.24
SDE2-201ENST00000272091 MSNP26038 577 aaKnown RBP13.52□□□□□ -0.24
SDE2-201ENST00000272091 LRRC8AQ8IWT6 810 aa13.52□□□□□ -0.24
SDE2-201ENST00000272091 DHTKD1Q96HY7 919 aaPredicted RBP13.52□□□□□ -0.24
SDE2-201ENST00000272091 RIT2Q99578 217 aa13.52□□□□□ -0.24
SDE2-201ENST00000272091 ADD3Q9UEY8 706 aaKnown RBP13.52□□□□□ -0.24
SDE2-201ENST00000272091 TEX33O43247 280 aa13.52□□□□□ -0.25
SDE2-201ENST00000272091 RGS20O76081 388 aa13.52□□□□□ -0.25
SDE2-201ENST00000272091 NF2P35240 595 aa13.52□□□□□ -0.25
SDE2-201ENST00000272091 MAP1SQ66K74 1059 aaPredicted RBP13.52□□□□□ -0.25
SDE2-201ENST00000272091 ANKRD40Q6AI12 368 aa13.52□□□□□ -0.25
SDE2-201ENST00000272091 TEKT3Q9BXF9 490 aa13.52□□□□□ -0.25
SDE2-201ENST00000272091 ACAD9Q9H845 621 aa13.52□□□□□ -0.25
SDE2-201ENST00000272091 TUFT1Q9NNX1 390 aa13.52□□□□□ -0.25
SDE2-201ENST00000272091 IMPACTQ9P2X3 320 aa13.52□□□□□ -0.25
SDE2-201ENST00000272091 LIMA1Q9UHB6 759 aaKnown RBP13.52□□□□□ -0.25
SDE2-201ENST00000272091 CXCL11O14625 94 aa13.52□□□□□ -0.25
SDE2-201ENST00000272091 CBFA2T2O43439 604 aa13.52□□□□□ -0.25
SDE2-201ENST00000272091 ATP9AO75110 1047 aa13.52□□□□□ -0.25
SDE2-201ENST00000272091 SSBP05455 408 aaKnown RBP eCLIP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms