RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 GMNCA6NCL1 334 aa13.14□□□□□ -0.31
ERBB2-201ENST00000269571 OPHN1O60890 802 aa13.14□□□□□ -0.31
ERBB2-201ENST00000269571 TMED1Q13445 227 aa13.14□□□□□ -0.31
ERBB2-201ENST00000269571 TMED8Q6PL24 325 aaPredicted RBP13.14□□□□□ -0.31
ERBB2-201ENST00000269571 SCYL3Q8IZE3 742 aa13.14□□□□□ -0.31
ERBB2-201ENST00000269571 TBC1D22AQ8WUA7 517 aa13.14□□□□□ -0.31
ERBB2-201ENST00000269571 HVCN1Q96D96 273 aa13.14□□□□□ -0.31
ERBB2-201ENST00000269571 RILPQ96NA2 401 aa13.14□□□□□ -0.31
ERBB2-201ENST00000269571 SENP2Q9HC62 589 aa13.14□□□□□ -0.31
ERBB2-201ENST00000269571 HPCAL4Q9UM19 191 aa13.14□□□□□ -0.31
ERBB2-201ENST00000269571 AGTPBP1Q9UPW5 1226 aa13.14□□□□□ -0.31
ERBB2-201ENST00000269571 DCAF8L1A6NGE4 600 aa13.14□□□□□ -0.31
ERBB2-201ENST00000269571 LRRIQ3A6PVS8 624 aaPredicted RBP13.14□□□□□ -0.31
ERBB2-201ENST00000269571 CLIC2O15247 247 aa13.14□□□□□ -0.31
ERBB2-201ENST00000269571 MYCLP12524 364 aaPredicted RBP13.14□□□□□ -0.31
ERBB2-201ENST00000269571 PSMC4P43686 418 aa13.14□□□□□ -0.31
ERBB2-201ENST00000269571 RASSF2P50749 326 aa13.14□□□□□ -0.31
ERBB2-201ENST00000269571 FKBP3Q00688 224 aaKnown RBP13.14□□□□□ -0.31
ERBB2-201ENST00000269571 NSMFQ6X4W1 530 aa13.14□□□□□ -0.31
ERBB2-201ENST00000269571 CFAP61Q8NHU2 1237 aa13.14□□□□□ -0.31
ERBB2-201ENST00000269571 LBHD1Q9BQE6 289 aaPredicted RBP13.14□□□□□ -0.31
ERBB2-201ENST00000269571 TUBE1Q9UJT0 475 aa13.14□□□□□ -0.31
ERBB2-201ENST00000269571 USP31Q70CQ4 1352 aa13.13□□□□□ -0.31
ERBB2-201ENST00000269571 CDC42BPGQ6DT37 1551 aa13.13□□□□□ -0.31
ERBB2-201ENST00000269571 A0A1B0GTH6 734 aa13.13□□□□□ -0.31
ERBB2-201ENST00000269571 TTC36A6NLP5 189 aa13.13□□□□□ -0.31
ERBB2-201ENST00000269571 DNAJC8O75937 253 aaPredicted RBP13.13□□□□□ -0.31
ERBB2-201ENST00000269571 GFPT2O94808 682 aa13.13□□□□□ -0.31
ERBB2-201ENST00000269571 MMEP08473 750 aa13.13□□□□□ -0.31
ERBB2-201ENST00000269571 PABPC4Q13310 644 aaKnown RBP eCLIP13.13□□□□□ -0.31
ERBB2-201ENST00000269571 MAP7D1Q3KQU3 841 aa13.13□□□□□ -0.31
ERBB2-201ENST00000269571 TBC1D10BQ4KMP7 808 aaPredicted RBP13.13□□□□□ -0.31
ERBB2-201ENST00000269571 PHLDB3Q6NSJ2 640 aa13.13□□□□□ -0.31
ERBB2-201ENST00000269571 NBPF10Q6P3W6 841 aaKnown RBP13.13□□□□□ -0.31
ERBB2-201ENST00000269571 PHLDB2Q86SQ0 1253 aa13.13□□□□□ -0.31
ERBB2-201ENST00000269571 DISC1Q9NRI5 854 aa13.13□□□□□ -0.31
ERBB2-201ENST00000269571 AGPAT5Q9NUQ2 364 aa13.13□□□□□ -0.31
ERBB2-201ENST00000269571 STK32BQ9NY57 414 aa13.13□□□□□ -0.31
ERBB2-201ENST00000269571 CPS1P31327 1500 aa13.13□□□□□ -0.31
ERBB2-201ENST00000269571 ACSL3O95573 720 aa13.13□□□□□ -0.31
ERBB2-201ENST00000269571 PDHA1P08559 390 aa13.13□□□□□ -0.31
ERBB2-201ENST00000269571 ATP2A2P16615 1042 aaKnown RBP13.13□□□□□ -0.31
ERBB2-201ENST00000269571 RFC1P35251 1148 aaPredicted RBP13.13□□□□□ -0.31
ERBB2-201ENST00000269571 NR1I3Q14994 352 aa13.13□□□□□ -0.31
ERBB2-201ENST00000269571 CCDC92Q53HC0 331 aaPredicted RBP13.13□□□□□ -0.31
ERBB2-201ENST00000269571 CCNI2Q6ZMN8 369 aaPredicted RBP13.13□□□□□ -0.31
ERBB2-201ENST00000269571 CTAGE3PQ8IX95 158 aa13.13□□□□□ -0.31
ERBB2-201ENST00000269571 OR2W6PQ8NHA6 318 aa13.13□□□□□ -0.31
ERBB2-201ENST00000269571 HPS3Q969F9 1004 aa13.13□□□□□ -0.31
ERBB2-201ENST00000269571 THAP9Q9H5L6 903 aa13.13□□□□□ -0.31
ERBB2-201ENST00000269571 EHD2Q9NZN4 543 aa13.13□□□□□ -0.31
ERBB2-201ENST00000269571 ADD3Q9UEY8 706 aaKnown RBP13.13□□□□□ -0.31
ERBB2-201ENST00000269571 INTUQ9ULD6 942 aa13.13□□□□□ -0.31
ERBB2-201ENST00000269571 FAF1Q9UNN5 650 aaPredicted RBP13.13□□□□□ -0.31
ERBB2-201ENST00000269571 ARHGAP42A6NI28 874 aa13.13□□□□□ -0.31
ERBB2-201ENST00000269571 SEMA3FQ13275 785 aa13.13□□□□□ -0.31
ERBB2-201ENST00000269571 PRR16Q569H4 304 aa13.13□□□□□ -0.31
ERBB2-201ENST00000269571 FAM47EQ6ZV65 393 aa13.13□□□□□ -0.31
ERBB2-201ENST00000269571 SDCCAG8Q86SQ7 713 aaPredicted RBP13.13□□□□□ -0.31
ERBB2-201ENST00000269571 IL17RAQ96F46 866 aa13.13□□□□□ -0.31
ERBB2-201ENST00000269571 ALDH8A1Q9H2A2 487 aaPredicted RBP13.13□□□□□ -0.31
ERBB2-201ENST00000269571 GINS2Q9Y248 185 aa13.13□□□□□ -0.31
ERBB2-201ENST00000269571 ZNF609O15014 1411 aa13.12□□□□□ -0.31
ERBB2-201ENST00000269571 FGGP02679 453 aa13.12□□□□□ -0.31
ERBB2-201ENST00000269571 LAMB3Q13751 1172 aa13.12□□□□□ -0.31
ERBB2-201ENST00000269571 ALKBH5Q6P6C2 394 aaKnown RBP13.12□□□□□ -0.31
ERBB2-201ENST00000269571 RASGRP2Q7LDG7 609 aa13.12□□□□□ -0.31
ERBB2-201ENST00000269571 SPDYE1Q8NFV5 336 aaPredicted RBP13.12□□□□□ -0.31
ERBB2-201ENST00000269571 CCT8L2Q96SF2 557 aa13.12□□□□□ -0.31
ERBB2-201ENST00000269571 FERMT1Q9BQL6 677 aa13.12□□□□□ -0.31
ERBB2-201ENST00000269571 PARP2Q9UGN5 583 aa13.12□□□□□ -0.31
ERBB2-201ENST00000269571 SRP68Q9UHB9 627 aaKnown RBP13.12□□□□□ -0.31
ERBB2-201ENST00000269571 L1RE1Q9UN81 338 aa13.12□□□□□ -0.31
ERBB2-201ENST00000269571 PPP1R37O75864 691 aa13.12□□□□□ -0.31
ERBB2-201ENST00000269571 CIAO1O76071 339 aa13.12□□□□□ -0.31
ERBB2-201ENST00000269571 GYPCP04921 128 aa13.12□□□□□ -0.31
ERBB2-201ENST00000269571 RASGRF1Q13972 1273 aa13.12□□□□□ -0.31
ERBB2-201ENST00000269571 CLUL1Q15846 466 aa13.12□□□□□ -0.31
ERBB2-201ENST00000269571 CFAP157Q5JU67 520 aa13.12□□□□□ -0.31
ERBB2-201ENST00000269571 NEK9Q8TD19 979 aa13.12□□□□□ -0.31
ERBB2-201ENST00000269571 TBCKQ8TEA7 893 aa13.12□□□□□ -0.31
ERBB2-201ENST00000269571 NAP1L4Q99733 375 aaKnown RBP13.12□□□□□ -0.31
ERBB2-201ENST00000269571 LY9Q9HBG7 655 aa13.12□□□□□ -0.31
ERBB2-201ENST00000269571 HAUS2Q9NVX0 235 aa13.12□□□□□ -0.31
ERBB2-201ENST00000269571 SEMA3EO15041 775 aa13.12□□□□□ -0.31
ERBB2-201ENST00000269571 GNA14O95837 355 aa13.12□□□□□ -0.31
ERBB2-201ENST00000269571 BCRP11274 1271 aa13.12□□□□□ -0.31
ERBB2-201ENST00000269571 LRRC14Q15048 493 aa13.12□□□□□ -0.31
ERBB2-201ENST00000269571 GBP7Q8N8V2 638 aaPredicted RBP13.12□□□□□ -0.31
ERBB2-201ENST00000269571 SLC40A1Q9NP59 571 aa13.12□□□□□ -0.31
ERBB2-201ENST00000269571 ATG3Q9NT62 314 aa13.12□□□□□ -0.31
ERBB2-201ENST00000269571 RASGRF2O14827 1237 aa13.12□□□□□ -0.31
ERBB2-201ENST00000269571 AP1G2O75843 785 aa13.12□□□□□ -0.31
ERBB2-201ENST00000269571 SKIP12755 728 aa13.12□□□□□ -0.31
ERBB2-201ENST00000269571 TRAPPC10P48553 1259 aa13.12□□□□□ -0.31
ERBB2-201ENST00000269571 DRP2Q13474 957 aa13.12□□□□□ -0.31
ERBB2-201ENST00000269571 CCDC127Q96BQ5 260 aa13.12□□□□□ -0.31
ERBB2-201ENST00000269571 FBXO2Q9UK22 296 aaPredicted RBP13.12□□□□□ -0.31
ERBB2-201ENST00000269571 PCDHA4Q9UN74 947 aa13.12□□□□□ -0.31
ERBB2-201ENST00000269571 PIK3C2BO00750 1634 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms