RNA–Protein interactions for RNA: ENST00000268099.13

SCAMP2-201, Transcript of secretory carrier membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP2, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-201ENST00000268099 ARHGAP27Q6ZUM4 889 aa16.91■□□□□ 0.3
SCAMP2-201ENST00000268099 KIRREL3Q8IZU9 778 aa16.91■□□□□ 0.3
SCAMP2-201ENST00000268099 CEP72Q9P209 647 aa16.91■□□□□ 0.3
SCAMP2-201ENST00000268099 ABCF2Q9UG63 623 aa16.91■□□□□ 0.3
SCAMP2-201ENST00000268099 SWAP70Q9UH65 585 aa16.91■□□□□ 0.3
SCAMP2-201ENST00000268099 F8W031 263 aaPredicted RBP16.91■□□□□ 0.3
SCAMP2-201ENST00000268099 KCNK3O14649 394 aa16.91■□□□□ 0.3
SCAMP2-201ENST00000268099 KCNMA1Q12791 1236 aa16.91■□□□□ 0.3
SCAMP2-201ENST00000268099 NKX1-1Q15270 411 aaPredicted RBP16.91■□□□□ 0.3
SCAMP2-201ENST00000268099 KIAA0753Q2KHM9 967 aa16.91■□□□□ 0.3
SCAMP2-201ENST00000268099 ACCSLQ4AC99 568 aa16.91■□□□□ 0.3
SCAMP2-201ENST00000268099 HIBCHQ6NVY1 386 aaPredicted RBP16.91■□□□□ 0.3
SCAMP2-201ENST00000268099 SCFD2Q8WU76 684 aa16.91■□□□□ 0.3
SCAMP2-201ENST00000268099 SYN2Q92777 582 aaPredicted RBP16.91■□□□□ 0.3
SCAMP2-201ENST00000268099 CUL5Q93034 780 aa16.91■□□□□ 0.3
SCAMP2-201ENST00000268099 TBC1D31Q96DN5 1066 aa16.91■□□□□ 0.3
SCAMP2-201ENST00000268099 RSRC1Q96IZ7 334 aaKnown RBP16.91■□□□□ 0.3
SCAMP2-201ENST00000268099 TANGO6Q9C0B7 1094 aa16.91■□□□□ 0.3
SCAMP2-201ENST00000268099 NUCKS1Q9H1E3 243 aaKnown RBP16.91■□□□□ 0.3
SCAMP2-201ENST00000268099 BAIAP2L1Q9UHR4 511 aa16.91■□□□□ 0.3
SCAMP2-201ENST00000268099 BHMG1C9JSJ3 638 aaPredicted RBP16.9■□□□□ 0.3
SCAMP2-201ENST00000268099 KIF5BP33176 963 aa16.9■□□□□ 0.3
SCAMP2-201ENST00000268099 DYNLL1P63167 89 aaKnown RBP16.9■□□□□ 0.3
SCAMP2-201ENST00000268099 EVX2Q03828 476 aa16.9■□□□□ 0.3
SCAMP2-201ENST00000268099 PPP1R7Q15435 360 aa16.9■□□□□ 0.3
SCAMP2-201ENST00000268099 SLC18A3Q16572 532 aa16.9■□□□□ 0.3
SCAMP2-201ENST00000268099 MAB21L3Q8N8X9 362 aa16.9■□□□□ 0.3
SCAMP2-201ENST00000268099 TBC1D5Q92609 795 aa16.9■□□□□ 0.3
SCAMP2-201ENST00000268099 HOOK2Q96ED9 719 aa16.9■□□□□ 0.3
SCAMP2-201ENST00000268099 CHMP6Q96FZ7 201 aa16.9■□□□□ 0.3
SCAMP2-201ENST00000268099 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.9■□□□□ 0.3
SCAMP2-201ENST00000268099 ATP6V0A2Q9Y487 856 aa16.9■□□□□ 0.3
SCAMP2-201ENST00000268099 CCDC88AQ3V6T2 1871 aa16.9■□□□□ 0.3
SCAMP2-201ENST00000268099 CCT8L1PA6NM43 557 aa16.9■□□□□ 0.3
SCAMP2-201ENST00000268099 TRIM37O94972 964 aa16.9■□□□□ 0.3
SCAMP2-201ENST00000268099 FLT3P36888 993 aa16.9■□□□□ 0.3
SCAMP2-201ENST00000268099 RPS6KA1Q15418 735 aa16.9■□□□□ 0.3
SCAMP2-201ENST00000268099 FAM47AQ5JRC9 791 aa16.9■□□□□ 0.3
SCAMP2-201ENST00000268099 LRRC55Q6ZSA7 311 aa16.9■□□□□ 0.3
SCAMP2-201ENST00000268099 PSMD1Q99460 953 aa16.9■□□□□ 0.3
SCAMP2-201ENST00000268099 A0A1B0GUL6 1792 aa16.9■□□□□ 0.3
SCAMP2-201ENST00000268099 NHSL1Q5SYE7 1610 aa16.9■□□□□ 0.3
SCAMP2-201ENST00000268099 BUB1BO60566 1050 aaPredicted RBP16.89■□□□□ 0.29
SCAMP2-201ENST00000268099 LRRC63Q05C16 580 aa16.89■□□□□ 0.29
SCAMP2-201ENST00000268099 KRT71Q3SY84 523 aa16.89■□□□□ 0.29
SCAMP2-201ENST00000268099 FAM83BQ5T0W9 1011 aa16.89■□□□□ 0.29
SCAMP2-201ENST00000268099 RCSD1Q6JBY9 416 aa16.89■□□□□ 0.29
SCAMP2-201ENST00000268099 CCDC197Q8NCU1 140 aa16.89■□□□□ 0.29
SCAMP2-201ENST00000268099 ANKS1AQ92625 1134 aa16.89■□□□□ 0.29
SCAMP2-201ENST00000268099 PACSIN1Q9BY11 444 aa16.89■□□□□ 0.29
SCAMP2-201ENST00000268099 CNOT10Q9H9A5 744 aaKnown RBP16.89■□□□□ 0.29
SCAMP2-201ENST00000268099 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.89■□□□□ 0.292e-8■□□□□ 11.3
SCAMP2-201ENST00000268099 A0A087X0T9 212 aa16.89■□□□□ 0.29
SCAMP2-201ENST00000268099 SART1O43290 800 aaKnown RBP16.89■□□□□ 0.29
SCAMP2-201ENST00000268099 NOL4O94818 638 aa16.89■□□□□ 0.29
SCAMP2-201ENST00000268099 OR52Z1P0C646 297 aa16.89■□□□□ 0.29
SCAMP2-201ENST00000268099 FAM228BP0C875 321 aa16.89■□□□□ 0.29
SCAMP2-201ENST00000268099 XPO6Q96QU8 1125 aaKnown RBP16.89■□□□□ 0.29
SCAMP2-201ENST00000268099 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.89■□□□□ 0.29
SCAMP2-201ENST00000268099 NUP98P52948 1817 aa16.89■□□□□ 0.29
SCAMP2-201ENST00000268099 CACNA1SQ13698 1873 aa16.88■□□□□ 0.29
SCAMP2-201ENST00000268099 USP17L12C9JPN9 530 aa16.88■□□□□ 0.29
SCAMP2-201ENST00000268099 USP17L21D6R901 530 aa16.88■□□□□ 0.29
SCAMP2-201ENST00000268099 CEP104O60308 925 aa16.88■□□□□ 0.29
SCAMP2-201ENST00000268099 ERMARDQ5T6L9 678 aa16.88■□□□□ 0.29
SCAMP2-201ENST00000268099 NAIF1Q69YI7 327 aaPredicted RBP16.88■□□□□ 0.29
SCAMP2-201ENST00000268099 CRELD2Q6UXH1 353 aaPredicted RBP16.88■□□□□ 0.29
SCAMP2-201ENST00000268099 TMC3Q7Z5M5 1100 aa16.88■□□□□ 0.29
SCAMP2-201ENST00000268099 GUF1Q8N442 669 aaKnown RBP16.88■□□□□ 0.29
SCAMP2-201ENST00000268099 PROCA1Q8NCQ7 364 aaPredicted RBP16.88■□□□□ 0.29
SCAMP2-201ENST00000268099 ACTRT1Q8TDG2 376 aa16.88■□□□□ 0.29
SCAMP2-201ENST00000268099 STAMBPL1Q96FJ0 436 aa16.88■□□□□ 0.29
SCAMP2-201ENST00000268099 PBKQ96KB5 322 aa16.88■□□□□ 0.29
SCAMP2-201ENST00000268099 AP1M1Q9BXS5 423 aa16.88■□□□□ 0.29
SCAMP2-201ENST00000268099 FAM129AQ9BZQ8 928 aa16.88■□□□□ 0.29
SCAMP2-201ENST00000268099 EBF2Q9HAK2 575 aa16.88■□□□□ 0.29
SCAMP2-201ENST00000268099 A0A0G2JS52 829 aa16.88■□□□□ 0.29
SCAMP2-201ENST00000268099 KIF3CO14782 793 aa16.88■□□□□ 0.29
SCAMP2-201ENST00000268099 KIF4AO95239 1232 aa16.88■□□□□ 0.29
SCAMP2-201ENST00000268099 STARD3NLO95772 234 aa16.88■□□□□ 0.29
SCAMP2-201ENST00000268099 USP11P51784 963 aa16.88■□□□□ 0.29
SCAMP2-201ENST00000268099 IRX1P78414 480 aaPredicted RBP16.88■□□□□ 0.29
SCAMP2-201ENST00000268099 DAGLBQ8NCG7 672 aa16.88■□□□□ 0.29
SCAMP2-201ENST00000268099 MDM1Q8TC05 714 aa16.88■□□□□ 0.29
SCAMP2-201ENST00000268099 CALR3Q96L12 384 aaKnown RBP16.88■□□□□ 0.29
SCAMP2-201ENST00000268099 DDX47Q9H0S4 455 aaKnown RBP16.88■□□□□ 0.29
SCAMP2-201ENST00000268099 GSTA1P08263 222 aa16.87■□□□□ 0.29
SCAMP2-201ENST00000268099 POLR2FP61218 127 aaKnown RBP16.87■□□□□ 0.29
SCAMP2-201ENST00000268099 UNC13DQ70J99 1090 aa16.87■□□□□ 0.29
SCAMP2-201ENST00000268099 ANKS4BQ8N8V4 417 aa16.87■□□□□ 0.29
SCAMP2-201ENST00000268099 CCDC63Q8NA47 563 aa16.87■□□□□ 0.29
SCAMP2-201ENST00000268099 NSMCE1Q8WV22 266 aa16.87■□□□□ 0.29
SCAMP2-201ENST00000268099 CENPTQ96BT3 561 aa16.87■□□□□ 0.29
SCAMP2-201ENST00000268099 SLC12A4Q9UP95 1085 aa16.87■□□□□ 0.29
SCAMP2-201ENST00000268099 F8VZ95 297 aa16.87■□□□□ 0.29
SCAMP2-201ENST00000268099 PGRMC1O00264 195 aaKnown RBP16.87■□□□□ 0.29
SCAMP2-201ENST00000268099 DAPK3O43293 454 aa16.87■□□□□ 0.29
SCAMP2-201ENST00000268099 CTNND1O60716 968 aaKnown RBP16.87■□□□□ 0.29
SCAMP2-201ENST00000268099 CALRP27797 417 aaKnown RBP16.87■□□□□ 0.29
SCAMP2-201ENST00000268099 MYO1EQ12965 1108 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms