RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 CNGA1P29973 690 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 EIF4A3P38919 411 aaKnown RBP15.25■□□□□ 0.03
CDH3-201ENST00000264012 CCDC170Q8IYT3 715 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 CABS1Q96KC9 395 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 PANX2Q96RD6 677 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 PCDHB4Q9Y5E5 795 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 AGLP35573 1532 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 PHLPP2Q6ZVD8 1323 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 USP17L10C9JJH3 530 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 CHGBP05060 677 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 OSBPP22059 807 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 GUCY2DQ02846 1103 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 MTERF2Q49AM1 385 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 FAM83BQ5T0W9 1011 aa15.25■□□□□ 0.03
CDH3-201ENST00000264012 GABPB2Q8TAK5 448 aaPredicted RBP15.25■□□□□ 0.03
CDH3-201ENST00000264012 PIK3C2BO00750 1634 aa15.24■□□□□ 0.03
CDH3-201ENST00000264012 CLEC17AQ6ZS10 378 aa15.24■□□□□ 0.03
CDH3-201ENST00000264012 UNC13DQ70J99 1090 aa15.24■□□□□ 0.03
CDH3-201ENST00000264012 EEPD1Q7L9B9 569 aa15.24■□□□□ 0.03
CDH3-201ENST00000264012 RNF8O76064 485 aa15.24■□□□□ 0.03
CDH3-201ENST00000264012 NDUFA10O95299 355 aa15.24■□□□□ 0.03
CDH3-201ENST00000264012 BSPRYQ5W0U4 402 aa15.24■□□□□ 0.03
CDH3-201ENST00000264012 NSUN4Q96CB9 384 aaKnown RBP15.24■□□□□ 0.03
CDH3-201ENST00000264012 MED10Q9BTT4 135 aa15.24■□□□□ 0.03
CDH3-201ENST00000264012 PXDNLA1KZ92 1463 aa15.24■□□□□ 0.03
CDH3-201ENST00000264012 GFPT2O94808 682 aa15.24■□□□□ 0.03
CDH3-201ENST00000264012 CAMTA2O94983 1202 aa15.24■□□□□ 0.03
CDH3-201ENST00000264012 MXI1P50539 228 aa15.24■□□□□ 0.03
CDH3-201ENST00000264012 SF3B3Q15393 1217 aaKnown RBP15.24■□□□□ 0.03
CDH3-201ENST00000264012 SESTD1Q86VW0 696 aa15.24■□□□□ 0.03
CDH3-201ENST00000264012 NHEJ1Q9H9Q4 299 aaPredicted RBP15.24■□□□□ 0.03
CDH3-201ENST00000264012 HGSO14964 777 aaPredicted RBP15.24■□□□□ 0.03
CDH3-201ENST00000264012 DDIT3P35638 169 aa15.24■□□□□ 0.03
CDH3-201ENST00000264012 DMTNQ08495 405 aa15.24■□□□□ 0.03
CDH3-201ENST00000264012 PPP4R3CPQ6ZMV5 832 aa15.24■□□□□ 0.03
CDH3-201ENST00000264012 CTAGE3PQ8IX95 158 aa15.24■□□□□ 0.03
CDH3-201ENST00000264012 NEDD1Q8NHV4 660 aa15.24■□□□□ 0.03
CDH3-201ENST00000264012 SPTLC3Q9NUV7 552 aa15.24■□□□□ 0.03
CDH3-201ENST00000264012 BARHL2Q9NY43 387 aa15.24■□□□□ 0.03
CDH3-201ENST00000264012 AKT3Q9Y243 479 aa15.24■□□□□ 0.03
CDH3-201ENST00000264012 CEMIPQ8WUJ3 1361 aa15.23■□□□□ 0.03
CDH3-201ENST00000264012 CAPN9O14815 690 aa15.23■□□□□ 0.03
CDH3-201ENST00000264012 HSPA1LP34931 641 aa15.23■□□□□ 0.03
CDH3-201ENST00000264012 CYP27A1Q02318 531 aa15.23■□□□□ 0.03
CDH3-201ENST00000264012 RCSD1Q6JBY9 416 aa15.23■□□□□ 0.03
CDH3-201ENST00000264012 SP8Q8IXZ3 490 aa15.23■□□□□ 0.03
CDH3-201ENST00000264012 MB21D1Q8N884 522 aa15.23■□□□□ 0.03
CDH3-201ENST00000264012 KRT12Q99456 494 aa15.23■□□□□ 0.03
CDH3-201ENST00000264012 PSAPP07602 524 aa15.23■□□□□ 0.03
CDH3-201ENST00000264012 PSMC4P43686 418 aa15.23■□□□□ 0.03
CDH3-201ENST00000264012 NSMCE1Q8WV22 266 aa15.23■□□□□ 0.03
CDH3-201ENST00000264012 ZNF653Q96CK0 615 aa15.23■□□□□ 0.03
CDH3-201ENST00000264012 PDIA6Q15084 440 aa15.23■□□□□ 0.03
CDH3-201ENST00000264012 GEN1Q17RS7 908 aa15.23■□□□□ 0.03
CDH3-201ENST00000264012 PDXDC2PQ6P474 469 aa15.23■□□□□ 0.03
CDH3-201ENST00000264012 RNF207Q6ZRF8 634 aa15.23■□□□□ 0.03
CDH3-201ENST00000264012 KIF28PB7ZC32 967 aa15.22■□□□□ 0.03
CDH3-201ENST00000264012 ARID5BQ14865 1188 aa15.22■□□□□ 0.03
CDH3-201ENST00000264012 P3H4Q92791 437 aa15.22■□□□□ 0.03
CDH3-201ENST00000264012 DIP2AQ14689 1571 aa15.22■□□□□ 0.03
CDH3-201ENST00000264012 MFAP3LO75121 409 aa15.22■□□□□ 0.03
CDH3-201ENST00000264012 PPP1R18Q6NYC8 613 aa15.22■□□□□ 0.03
CDH3-201ENST00000264012 PIGOQ8TEQ8 1089 aa15.22■□□□□ 0.03
CDH3-201ENST00000264012 ZNF148Q9UQR1 794 aa15.22■□□□□ 0.03
CDH3-201ENST00000264012 IQSEC2Q5JU85 1478 aa15.22■□□□□ 0.03
CDH3-201ENST00000264012 PALM3A6NDB9 673 aaPredicted RBP15.22■□□□□ 0.03
CDH3-201ENST00000264012 INPP5BP32019 993 aa15.22■□□□□ 0.03
CDH3-201ENST00000264012 C12orf60Q5U649 245 aa15.22■□□□□ 0.03
CDH3-201ENST00000264012 TRIM50Q86XT4 487 aa15.22■□□□□ 0.03
CDH3-201ENST00000264012 PALM2Q8IXS6 379 aa15.22■□□□□ 0.03
CDH3-201ENST00000264012 UBE2TQ9NPD8 197 aaPredicted RBP15.22■□□□□ 0.03
CDH3-201ENST00000264012 TMEM260Q9NX78 707 aa15.22■□□□□ 0.03
CDH3-201ENST00000264012 SFI1A8K8P3 1242 aa15.22■□□□□ 0.03
CDH3-201ENST00000264012 F5H6K3 240 aa15.22■□□□□ 0.03
CDH3-201ENST00000264012 PPFIA4O75335 1185 aa15.22■□□□□ 0.03
CDH3-201ENST00000264012 IREB2P48200 963 aaKnown RBP15.22■□□□□ 0.03
CDH3-201ENST00000264012 KLRC3Q07444 240 aa15.22■□□□□ 0.03
CDH3-201ENST00000264012 BFSP1Q12934 665 aa15.22■□□□□ 0.03
CDH3-201ENST00000264012 ARMC9Q7Z3E5 817 aa15.22■□□□□ 0.03
CDH3-201ENST00000264012 VSIG1Q86XK7 387 aa15.22■□□□□ 0.03
CDH3-201ENST00000264012 ANKRD42Q8N9B4 389 aa15.22■□□□□ 0.03
CDH3-201ENST00000264012 MARCH10Q8NA82 808 aaPredicted RBP15.22■□□□□ 0.03
CDH3-201ENST00000264012 CCDC110Q8TBZ0 833 aa15.22■□□□□ 0.03
CDH3-201ENST00000264012 APOL6Q9BWW8 343 aa15.22■□□□□ 0.03
CDH3-201ENST00000264012 SERPING1P05155 500 aa15.21■□□□□ 0.03
CDH3-201ENST00000264012 ARHGAP4P98171 946 aa15.21■□□□□ 0.03
CDH3-201ENST00000264012 MKRN1Q9UHC7 482 aaKnown RBP15.21■□□□□ 0.03
CDH3-201ENST00000264012 ODF2LQ9ULJ1 636 aa15.21■□□□□ 0.03
CDH3-201ENST00000264012 RC3H1Q5TC82 1133 aaKnown RBP15.21■□□□□ 0.03
CDH3-201ENST00000264012 KAZNQ674X7 775 aa15.21■□□□□ 0.03
CDH3-201ENST00000264012 MGARPQ8TDB4 240 aa15.21■□□□□ 0.03
CDH3-201ENST00000264012 MAGOHBQ96A72 148 aaKnown RBP15.21■□□□□ 0.03
CDH3-201ENST00000264012 TBC1D31Q96DN5 1066 aa15.21■□□□□ 0.03
CDH3-201ENST00000264012 ANKRD36BP1Q96IX9 119 aa15.21■□□□□ 0.03
CDH3-201ENST00000264012 PASKQ96RG2 1323 aa15.21■□□□□ 0.03
CDH3-201ENST00000264012 THAP12O43422 761 aa15.21■□□□□ 0.03
CDH3-201ENST00000264012 ABCD1P33897 745 aa15.21■□□□□ 0.03
CDH3-201ENST00000264012 KIF11P52732 1056 aa15.21■□□□□ 0.03
CDH3-201ENST00000264012 TFAMQ00059 246 aaKnown RBP15.21■□□□□ 0.03
CDH3-201ENST00000264012 SF3A3Q12874 501 aaKnown RBP eCLIP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms