RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 RNF146Q9NTX7 359 aa17.63■□□□□ 0.41
VPS26A-201ENST00000263559 SPTLC3Q9NUV7 552 aa17.63■□□□□ 0.41
VPS26A-201ENST00000263559 LIMA1Q9UHB6 759 aaKnown RBP17.63■□□□□ 0.41
VPS26A-201ENST00000263559 ZNF214Q9UL59 606 aaPredicted RBP17.63■□□□□ 0.41
VPS26A-201ENST00000263559 DNM3Q9UQ16 869 aa17.63■□□□□ 0.41
VPS26A-201ENST00000263559 NPHP3-ACAD11A0A0J9YXS1 232 aa17.63■□□□□ 0.41
VPS26A-201ENST00000263559 LRRC10BA6NIK2 292 aa17.63■□□□□ 0.41
VPS26A-201ENST00000263559 KCNJ18B7U540 433 aa17.63■□□□□ 0.41
VPS26A-201ENST00000263559 CHMP2AO43633 222 aa17.63■□□□□ 0.41
VPS26A-201ENST00000263559 GAS7O60861 476 aa17.63■□□□□ 0.41
VPS26A-201ENST00000263559 CYP11B2P19099 503 aa17.63■□□□□ 0.41
VPS26A-201ENST00000263559 EPHX2P34913 555 aa17.63■□□□□ 0.41
VPS26A-201ENST00000263559 PPP1R2P41236 205 aa17.63■□□□□ 0.41
VPS26A-201ENST00000263559 KCNJ12Q14500 433 aa17.63■□□□□ 0.41
VPS26A-201ENST00000263559 TMEM132BQ14DG7 1078 aa17.63■□□□□ 0.41
VPS26A-201ENST00000263559 TCP11X2Q5H9J9 407 aa17.63■□□□□ 0.41
VPS26A-201ENST00000263559 ANKRD40Q6AI12 368 aa17.63■□□□□ 0.41
VPS26A-201ENST00000263559 RBM46Q8TBY0 533 aaKnown RBP17.63■□□□□ 0.41
VPS26A-201ENST00000263559 TRIM47Q96LD4 638 aa17.63■□□□□ 0.41
VPS26A-201ENST00000263559 DUSP9Q99956 384 aaKnown RBP17.63■□□□□ 0.41
VPS26A-201ENST00000263559 SRRTQ9BXP5 876 aaKnown RBP17.63■□□□□ 0.41
VPS26A-201ENST00000263559 SFPQP23246 707 aaKnown RBP eCLIP17.62■□□□□ 0.41
VPS26A-201ENST00000263559 SPAG1Q07617 926 aa17.62■□□□□ 0.41
VPS26A-201ENST00000263559 ARSHQ5FYA8 562 aa17.62■□□□□ 0.41
VPS26A-201ENST00000263559 PCNX4Q63HM2 1172 aa17.62■□□□□ 0.41
VPS26A-201ENST00000263559 CREBRFQ8IUR6 639 aa17.62■□□□□ 0.41
VPS26A-201ENST00000263559 PURBQ96QR8 312 aaKnown RBP17.62■□□□□ 0.41
VPS26A-201ENST00000263559 HSD17B14Q9BPX1 270 aa17.62■□□□□ 0.41
VPS26A-201ENST00000263559 WDR11Q9BZH6 1224 aa17.62■□□□□ 0.41
VPS26A-201ENST00000263559 PANK4Q9NVE7 773 aa17.62■□□□□ 0.41
VPS26A-201ENST00000263559 CSADQ9Y600 493 aa17.62■□□□□ 0.41
VPS26A-201ENST00000263559 IPO5O00410 1097 aaKnown RBP17.62■□□□□ 0.41
VPS26A-201ENST00000263559 EIF2AK2P19525 551 aaKnown RBP17.62■□□□□ 0.41
VPS26A-201ENST00000263559 OAZ1P54368 228 aa17.62■□□□□ 0.41
VPS26A-201ENST00000263559 MRPS9P82933 396 aaKnown RBP17.62■□□□□ 0.41
VPS26A-201ENST00000263559 COASYQ13057 564 aa17.62■□□□□ 0.41
VPS26A-201ENST00000263559 PSMD2Q13200 908 aa17.62■□□□□ 0.41
VPS26A-201ENST00000263559 PABPC4Q13310 644 aaKnown RBP eCLIP17.62■□□□□ 0.411e-6■■□□□ 12.5
VPS26A-201ENST00000263559 SPECC1LQ69YQ0 1117 aa17.62■□□□□ 0.41
VPS26A-201ENST00000263559 FRMPD4Q14CM0 1322 aa17.61■□□□□ 0.41
VPS26A-201ENST00000263559 BICDL2A1A5D9 508 aa17.61■□□□□ 0.41
VPS26A-201ENST00000263559 OFD1O75665 1012 aa17.61■□□□□ 0.41
VPS26A-201ENST00000263559 SLITRK3O94933 977 aa17.61■□□□□ 0.41
VPS26A-201ENST00000263559 CACNB1Q02641 598 aaPredicted RBP17.61■□□□□ 0.41
VPS26A-201ENST00000263559 RAD51AP2Q09MP3 1159 aa17.61■□□□□ 0.41
VPS26A-201ENST00000263559 TBX2Q13207 712 aaPredicted RBP17.61■□□□□ 0.41
VPS26A-201ENST00000263559 FILIP1LQ4L180 1135 aa17.61■□□□□ 0.41
VPS26A-201ENST00000263559 SYT2Q8N9I0 419 aaPredicted RBP17.61■□□□□ 0.41
VPS26A-201ENST00000263559 SEMA6BQ9H3T3 888 aa17.61■□□□□ 0.41
VPS26A-201ENST00000263559 KCNH7Q9NS40 1196 aa17.61■□□□□ 0.41
VPS26A-201ENST00000263559 HOXC10Q9NYD6 342 aa17.61■□□□□ 0.41
VPS26A-201ENST00000263559 UBIAD1Q9Y5Z9 338 aa17.61■□□□□ 0.41
VPS26A-201ENST00000263559 SPDYE16A6NNV3 312 aaPredicted RBP17.61■□□□□ 0.41
VPS26A-201ENST00000263559 BCRP11274 1271 aa17.61■□□□□ 0.41
VPS26A-201ENST00000263559 IREB2P48200 963 aaKnown RBP17.61■□□□□ 0.41
VPS26A-201ENST00000263559 BAATQ14032 418 aaPredicted RBP17.61■□□□□ 0.41
VPS26A-201ENST00000263559 CTTNQ14247 550 aaKnown RBP17.61■□□□□ 0.41
VPS26A-201ENST00000263559 PGM5Q15124 567 aa17.61■□□□□ 0.41
VPS26A-201ENST00000263559 GPR162Q16538 588 aa17.61■□□□□ 0.41
VPS26A-201ENST00000263559 GLIS3Q8NEA6 775 aa17.61■□□□□ 0.41
VPS26A-201ENST00000263559 CDCA5Q96FF9 252 aa17.61■□□□□ 0.41
VPS26A-201ENST00000263559 DYDC2Q96IM9 177 aa17.61■□□□□ 0.41
VPS26A-201ENST00000263559 RMDN3Q96TC7 470 aa17.61■□□□□ 0.41
VPS26A-201ENST00000263559 TEKT3Q9BXF9 490 aa17.61■□□□□ 0.41
VPS26A-201ENST00000263559 VPS16Q9H269 839 aa17.61■□□□□ 0.41
VPS26A-201ENST00000263559 UNC45AQ9H3U1 944 aa17.61■□□□□ 0.41
VPS26A-201ENST00000263559 THAP9Q9H5L6 903 aa17.61■□□□□ 0.41
VPS26A-201ENST00000263559 COPB1P53618 953 aaKnown RBP17.6■□□□□ 0.41
VPS26A-201ENST00000263559 GOLGA8FQ08AF8 430 aa17.6■□□□□ 0.41
VPS26A-201ENST00000263559 GOLGA8DPQ0D2H9 430 aa17.6■□□□□ 0.41
VPS26A-201ENST00000263559 TKFCQ3LXA3 575 aa17.6■□□□□ 0.41
VPS26A-201ENST00000263559 TREML2Q5T2D2 321 aa17.6■□□□□ 0.41
VPS26A-201ENST00000263559 CENPPQ6IPU0 288 aa17.6■□□□□ 0.41
VPS26A-201ENST00000263559 B3GNT9Q6UX72 402 aa17.6■□□□□ 0.41
VPS26A-201ENST00000263559 MOB2Q70IA6 237 aa17.6■□□□□ 0.41
VPS26A-201ENST00000263559 CSGALNACT2Q8N6G5 542 aa17.6■□□□□ 0.41
VPS26A-201ENST00000263559 TAB2Q9NYJ8 693 aa17.6■□□□□ 0.41
VPS26A-201ENST00000263559 ATP2A1O14983 1001 aa17.6■□□□□ 0.41
VPS26A-201ENST00000263559 PBX1P40424 430 aa17.6■□□□□ 0.41
VPS26A-201ENST00000263559 LRRC41Q15345 812 aa17.6■□□□□ 0.41
VPS26A-201ENST00000263559 NIPA1Q7RTP0 329 aa17.6■□□□□ 0.41
VPS26A-201ENST00000263559 TPH2Q8IWU9 490 aa17.6■□□□□ 0.41
VPS26A-201ENST00000263559 GUF1Q8N442 669 aaKnown RBP17.6■□□□□ 0.41
VPS26A-201ENST00000263559 ANKRD20A12PQ8NF67 263 aa17.6■□□□□ 0.41
VPS26A-201ENST00000263559 ZC3H15Q8WU90 426 aaKnown RBP17.6■□□□□ 0.41
VPS26A-201ENST00000263559 EEF2KMTQ96G04 330 aa17.6■□□□□ 0.41
VPS26A-201ENST00000263559 RIT2Q99578 217 aa17.6■□□□□ 0.41
VPS26A-201ENST00000263559 ELP3Q9H9T3 547 aa17.6■□□□□ 0.41
VPS26A-201ENST00000263559 TUFT1Q9NNX1 390 aa17.6■□□□□ 0.41
VPS26A-201ENST00000263559 PXMP2Q9NR77 195 aa17.6■□□□□ 0.41
VPS26A-201ENST00000263559 PKD2L1Q9P0L9 805 aa17.6■□□□□ 0.41
VPS26A-201ENST00000263559 GLTPD2A6NH11 291 aa17.59■□□□□ 0.41
VPS26A-201ENST00000263559 N4BP3O15049 544 aa17.59■□□□□ 0.41
VPS26A-201ENST00000263559 KRT18P05783 430 aaKnown RBP17.59■□□□□ 0.41
VPS26A-201ENST00000263559 CCDC65Q8IXS2 484 aa17.59■□□□□ 0.41
VPS26A-201ENST00000263559 PDCD2LQ9BRP1 358 aa17.59■□□□□ 0.41
VPS26A-201ENST00000263559 JADE2Q9NQC1 790 aa17.59■□□□□ 0.41
VPS26A-201ENST00000263559 MYCLP12524 364 aaPredicted RBP17.59■□□□□ 0.41
VPS26A-201ENST00000263559 FAM26FQ5R3K3 315 aa17.59■□□□□ 0.41
VPS26A-201ENST00000263559 NOC3LQ8WTT2 800 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms