RNA–Protein interactions for RNA: ENST00000262812.8

COPE-201, Transcript of coatomer protein complex subunit epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPE, Length 1,141 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-201ENST00000262812 CDHR1Q96JP9 859 aa21.05■□□□□ 0.96
COPE-201ENST00000262812 GPR20Q99678 358 aa21.05■□□□□ 0.96
COPE-201ENST00000262812 SENP7Q9BQF6 1050 aa21.05■□□□□ 0.96
COPE-201ENST00000262812 NOC4LQ9BVI4 516 aaKnown RBP21.05■□□□□ 0.96
COPE-201ENST00000262812 HDAC6Q9UBN7 1215 aa21.05■□□□□ 0.96
COPE-201ENST00000262812 TRIOBPQ9H2D6 2365 aa21.05■□□□□ 0.96
COPE-201ENST00000262812 ESYT2A0FGR8 921 aa21.04■□□□□ 0.96
COPE-201ENST00000262812 PFKFB2O60825 505 aa21.04■□□□□ 0.96
COPE-201ENST00000262812 ACRP10323 421 aa21.04■□□□□ 0.96
COPE-201ENST00000262812 KCNA2P16389 499 aa21.04■□□□□ 0.96
COPE-201ENST00000262812 PTGISQ16647 500 aa21.04■□□□□ 0.96
COPE-201ENST00000262812 GDF6Q6KF10 455 aaPredicted RBP21.04■□□□□ 0.96
COPE-201ENST00000262812 REXO1Q8N1G1 1221 aaKnown RBP21.04■□□□□ 0.96
COPE-201ENST00000262812 NECAB1Q8N987 351 aa21.04■□□□□ 0.96
COPE-201ENST00000262812 GIMAP8Q8ND71 665 aaPredicted RBP21.04■□□□□ 0.96
COPE-201ENST00000262812 CCDC148Q8NFR7 591 aa21.04■□□□□ 0.96
COPE-201ENST00000262812 IL17RAQ96F46 866 aa21.04■□□□□ 0.96
COPE-201ENST00000262812 AIFM3Q96NN9 605 aa21.04■□□□□ 0.96
COPE-201ENST00000262812 C16orf70Q9BSU1 422 aa21.04■□□□□ 0.96
COPE-201ENST00000262812 KATNAL1Q9BW62 490 aa21.04■□□□□ 0.96
COPE-201ENST00000262812 DEXIO95424 95 aa21.03■□□□□ 0.96
COPE-201ENST00000262812 F2P00734 622 aa21.03■□□□□ 0.96
COPE-201ENST00000262812 ARP10275 920 aa21.03■□□□□ 0.96
COPE-201ENST00000262812 HOXD8P13378 290 aaPredicted RBP21.03■□□□□ 0.96
COPE-201ENST00000262812 SREBF1P36956 1147 aa21.03■□□□□ 0.96
COPE-201ENST00000262812 ARHGAP4P98171 946 aa21.03■□□□□ 0.96
COPE-201ENST00000262812 PPIGQ13427 754 aaKnown RBP eCLIP21.03■□□□□ 0.963e-7■□□□□ 11.2
COPE-201ENST00000262812 BICD2Q8TD16 824 aa21.03■□□□□ 0.96
COPE-201ENST00000262812 UIMC1Q96RL1 719 aa21.03■□□□□ 0.96
COPE-201ENST00000262812 KCNH7Q9NS40 1196 aa21.03■□□□□ 0.96
COPE-201ENST00000262812 KIAA1217Q5T5P2 1943 aa21.03■□□□□ 0.96
COPE-201ENST00000262812 H3BRB1 525 aa21.02■□□□□ 0.96
COPE-201ENST00000262812 HAS3O00219 553 aa21.02■□□□□ 0.96
COPE-201ENST00000262812 MAFGO15525 162 aa21.02■□□□□ 0.96
COPE-201ENST00000262812 CDKL5O76039 1030 aa21.02■□□□□ 0.96
COPE-201ENST00000262812 LGALS2P05162 132 aa21.02■□□□□ 0.96
COPE-201ENST00000262812 LRIT3Q3SXY7 679 aa21.02■□□□□ 0.96
COPE-201ENST00000262812 CEP55Q53EZ4 464 aa21.02■□□□□ 0.96
COPE-201ENST00000262812 C16orf59Q7L2K0 433 aa21.02■□□□□ 0.96
COPE-201ENST00000262812 SCLYQ96I15 445 aa21.02■□□□□ 0.96
COPE-201ENST00000262812 TUT1Q9H6E5 874 aaKnown RBP21.02■□□□□ 0.96
COPE-201ENST00000262812 SH3GLB2Q9NR46 395 aa21.02■□□□□ 0.96
COPE-201ENST00000262812 ZNF200P98182 395 aaPredicted RBP21.01■□□□□ 0.95
COPE-201ENST00000262812 ME3Q16798 604 aa21.01■□□□□ 0.95
COPE-201ENST00000262812 MCTP2Q6DN12 878 aa21.01■□□□□ 0.95
COPE-201ENST00000262812 SESTD1Q86VW0 696 aa21.01■□□□□ 0.95
COPE-201ENST00000262812 RETREG2Q8NC44 543 aa21.01■□□□□ 0.95
COPE-201ENST00000262812 RNPC3Q96LT9 517 aaKnown RBP21.01■□□□□ 0.95
COPE-201ENST00000262812 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.01■□□□□ 0.953e-9■■□□□ 14.4
COPE-201ENST00000262812 WNT8AQ9H1J5 351 aa21.01■□□□□ 0.95
COPE-201ENST00000262812 GTF2IRD1Q9UHL9 959 aa21.01■□□□□ 0.95
COPE-201ENST00000262812 MEIS1O00470 390 aa21■□□□□ 0.95
COPE-201ENST00000262812 LARGE1O95461 756 aa21■□□□□ 0.95
COPE-201ENST00000262812 TRIM50Q86XT4 487 aa21■□□□□ 0.95
COPE-201ENST00000262812 SEPT1Q8WYJ6 367 aa21■□□□□ 0.95
COPE-201ENST00000262812 AGO4Q9HCK5 861 aaKnown RBP21■□□□□ 0.95
COPE-201ENST00000262812 GSTTP1A0A1W2PQM5 241 aa20.99■□□□□ 0.95
COPE-201ENST00000262812 FAM86B1E9PN63 330 aa20.99■□□□□ 0.95
COPE-201ENST00000262812 CTDNEP1O95476 244 aa20.99■□□□□ 0.95
COPE-201ENST00000262812 FAM86B2P0C5J1 330 aa20.99■□□□□ 0.95
COPE-201ENST00000262812 TCF7P36402 384 aaPredicted RBP20.99■□□□□ 0.95
COPE-201ENST00000262812 HIC1Q14526 733 aa20.99■□□□□ 0.95
COPE-201ENST00000262812 ZNF365Q70YC5 407 aa20.99■□□□□ 0.95
COPE-201ENST00000262812 PLA2G4DQ86XP0 818 aa20.99■□□□□ 0.95
COPE-201ENST00000262812 CTAGE1Q96RT6 745 aa20.99■□□□□ 0.95
COPE-201ENST00000262812 SDF4Q9BRK5 362 aa20.99■□□□□ 0.95
COPE-201ENST00000262812 C22orf23Q9BZE7 217 aa20.99■□□□□ 0.95
COPE-201ENST00000262812 IL23AQ9NPF7 189 aa20.99■□□□□ 0.95
COPE-201ENST00000262812 PCDHA4Q9UN74 947 aa20.99■□□□□ 0.95
COPE-201ENST00000262812 KCNJ14Q9UNX9 436 aa20.99■□□□□ 0.95
COPE-201ENST00000262812 LTBP2Q14767 1821 aa20.99■□□□□ 0.95
COPE-201ENST00000262812 CYP3A4P08684 503 aa20.98■□□□□ 0.95
COPE-201ENST00000262812 SMIM10L2AP0DMW4 78 aa20.98■□□□□ 0.95
COPE-201ENST00000262812 SMIM10L2BP0DMW5 78 aa20.98■□□□□ 0.95
COPE-201ENST00000262812 BFSP2Q13515 415 aa20.98■□□□□ 0.95
COPE-201ENST00000262812 TMEM240Q5SV17 173 aa20.98■□□□□ 0.95
COPE-201ENST00000262812 DEFB128Q7Z7B8 93 aa20.98■□□□□ 0.95
COPE-201ENST00000262812 JPH1Q9HDC5 661 aaPredicted RBP20.98■□□□□ 0.95
COPE-201ENST00000262812 SLC9A2Q9UBY0 812 aa20.98■□□□□ 0.95
COPE-201ENST00000262812 C17orf102A2RUQ5 167 aa20.97■□□□□ 0.95
COPE-201ENST00000262812 DDX39AO00148 427 aaKnown RBP20.97■□□□□ 0.95
COPE-201ENST00000262812 SLC34A2O95436 690 aa20.97■□□□□ 0.95
COPE-201ENST00000262812 FGBP02675 491 aa20.97■□□□□ 0.95
COPE-201ENST00000262812 ITGB3BPQ13352 177 aaPredicted RBP20.97■□□□□ 0.95
COPE-201ENST00000262812 RPUSD2Q8IZ73 545 aaKnown RBP20.97■□□□□ 0.95
COPE-201ENST00000262812 BLIDQ8IZY5 108 aa20.97■□□□□ 0.95
COPE-201ENST00000262812 CRYGNQ8WXF5 182 aa20.97■□□□□ 0.95
COPE-201ENST00000262812 DHX38Q92620 1227 aaKnown RBP20.97■□□□□ 0.95
COPE-201ENST00000262812 GLG1Q92896 1179 aa20.97■□□□□ 0.95
COPE-201ENST00000262812 GTF3C6Q969F1 213 aa20.97■□□□□ 0.95
COPE-201ENST00000262812 GJB4Q9NTQ9 266 aa20.97■□□□□ 0.95
COPE-201ENST00000262812 ORC3Q9UBD5 711 aaPredicted RBP20.97■□□□□ 0.95
COPE-201ENST00000262812 ZNF215Q9UL58 517 aaPredicted RBP20.97■□□□□ 0.95
COPE-201ENST00000262812 MARK3P27448 753 aa20.96■□□□□ 0.95
COPE-201ENST00000262812 PRR16Q569H4 304 aa20.96■□□□□ 0.95
COPE-201ENST00000262812 NIPA1Q7RTP0 329 aa20.96■□□□□ 0.95
COPE-201ENST00000262812 OTOP2Q7RTS6 562 aa20.96■□□□□ 0.95
COPE-201ENST00000262812 RNPEPQ9H4A4 650 aa20.96■□□□□ 0.95
COPE-201ENST00000262812 SETD4Q9NVD3 440 aa20.96■□□□□ 0.95
COPE-201ENST00000262812 SCN10AQ9Y5Y9 1956 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms