RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 IFT74Q96LB3 600 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 IKBKGQ9Y6K9 419 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 DOT1LQ8TEK3 1739 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 FLOT1O75955 427 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 LYPLA2O95372 231 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 P4HBP07237 508 aaKnown RBP9.05□□□□□ -0.96
PTPN3-201ENST00000262539 NHSQ6T4R5 1651 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 ZC3H15Q8WU90 426 aaKnown RBP9.05□□□□□ -0.96
PTPN3-201ENST00000262539 SREK1Q8WXA9 508 aaKnown RBP9.05□□□□□ -0.96
PTPN3-201ENST00000262539 BACH1O14867 736 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 ZNF280AP59817 542 aaPredicted RBP9.05□□□□□ -0.96
PTPN3-201ENST00000262539 UBXN1Q04323 297 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 KIF4BQ2VIQ3 1234 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 CASQ1P31415 396 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 GNG11P61952 73 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 IRX3P78415 501 aaPredicted RBP9.05□□□□□ -0.96
PTPN3-201ENST00000262539 HYIQ5T013 277 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 LRCH2Q5VUJ6 765 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 CDAN1Q8IWY9 1227 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 CERS5Q8N5B7 392 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 C12orf42Q96LP6 360 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 ANKEF1Q9NU02 776 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 NRAPQ86VF7 1730 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 PLCG1P19174 1290 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 TOB1P50616 345 aaPredicted RBP9.05□□□□□ -0.96
PTPN3-201ENST00000262539 WHAMMP3Q1A5X7 153 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 CDKAL1Q5VV42 579 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 GPBP1Q86WP2 473 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 SMAP1Q8IYB5 467 aaPredicted RBP9.05□□□□□ -0.96
PTPN3-201ENST00000262539 CPLX3Q8WVH0 158 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 NRBP2Q9NSY0 501 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 PRR12Q9ULL5 1215 aa9.05□□□□□ -0.96
PTPN3-201ENST00000262539 GAS2O43903 313 aaKnown RBP9.04□□□□□ -0.96
PTPN3-201ENST00000262539 GUCY1A2P33402 732 aa9.04□□□□□ -0.96
PTPN3-201ENST00000262539 KARSQ15046 597 aaKnown RBP9.04□□□□□ -0.96
PTPN3-201ENST00000262539 ZNF526Q8TF50 670 aaPredicted RBP9.04□□□□□ -0.96
PTPN3-201ENST00000262539 SYN2Q92777 582 aaPredicted RBP9.04□□□□□ -0.96
PTPN3-201ENST00000262539 ERGIC2Q96RQ1 377 aa9.04□□□□□ -0.96
PTPN3-201ENST00000262539 GMLQ99445 158 aa9.04□□□□□ -0.96
PTPN3-201ENST00000262539 FTOQ9C0B1 505 aaKnown RBP eCLIP9.04□□□□□ -0.96
PTPN3-201ENST00000262539 TYW1Q9NV66 732 aaKnown RBP9.04□□□□□ -0.96
PTPN3-201ENST00000262539 EIF3DO15371 548 aaKnown RBP eCLIP9.04□□□□□ -0.96
PTPN3-201ENST00000262539 PPFIA3O75145 1194 aa9.04□□□□□ -0.96
PTPN3-201ENST00000262539 SURF1Q15526 300 aa9.04□□□□□ -0.96
PTPN3-201ENST00000262539 PKD2L1Q9P0L9 805 aa9.04□□□□□ -0.96
PTPN3-201ENST00000262539 SNED1Q8TER0 1413 aa9.04□□□□□ -0.96
PTPN3-201ENST00000262539 A6NNZ2 444 aa9.04□□□□□ -0.96
PTPN3-201ENST00000262539 CXCL11O14625 94 aa9.04□□□□□ -0.96
PTPN3-201ENST00000262539 ICAM1P05362 532 aa9.04□□□□□ -0.96
PTPN3-201ENST00000262539 ENPEPQ07075 957 aa9.04□□□□□ -0.96
PTPN3-201ENST00000262539 COG2Q14746 738 aa9.04□□□□□ -0.96
PTPN3-201ENST00000262539 TUBB8Q3ZCM7 444 aa9.04□□□□□ -0.96
PTPN3-201ENST00000262539 ZNF384Q8TF68 577 aa9.04□□□□□ -0.96
PTPN3-201ENST00000262539 RNF34Q969K3 372 aa9.04□□□□□ -0.96
PTPN3-201ENST00000262539 TUBGCP2Q9BSJ2 902 aa9.04□□□□□ -0.96
PTPN3-201ENST00000262539 NACA2Q9H009 215 aa9.04□□□□□ -0.96
PTPN3-201ENST00000262539 OLFML3Q9NRN5 406 aa9.04□□□□□ -0.96
PTPN3-201ENST00000262539 SSU72P8A0A1W2PR75 194 aa9.04□□□□□ -0.96
PTPN3-201ENST00000262539 ZWINTO95229 277 aa9.04□□□□□ -0.96
PTPN3-201ENST00000262539 XRCC5P13010 732 aaKnown RBP9.04□□□□□ -0.96
PTPN3-201ENST00000262539 ZNF18P17022 549 aa9.04□□□□□ -0.96
PTPN3-201ENST00000262539 LMNB1P20700 586 aa9.04□□□□□ -0.96
PTPN3-201ENST00000262539 BPIFB4P59827 614 aa9.04□□□□□ -0.96
PTPN3-201ENST00000262539 FAM43BQ6ZT52 329 aaPredicted RBP9.04□□□□□ -0.96
PTPN3-201ENST00000262539 TTC39CQ8N584 583 aa9.04□□□□□ -0.96
PTPN3-201ENST00000262539 EPSTI1Q96J88 318 aa9.04□□□□□ -0.96
PTPN3-201ENST00000262539 ACAD9Q9H845 621 aa9.04□□□□□ -0.96
PTPN3-201ENST00000262539 A0A1W2PQJ5 194 aa9.04□□□□□ -0.96
PTPN3-201ENST00000262539 TMEM110-MUSTN1A8MSY1 372 aa9.04□□□□□ -0.96
PTPN3-201ENST00000262539 TCP10L2B9ZVM9 353 aa9.04□□□□□ -0.96
PTPN3-201ENST00000262539 RAD17O75943 681 aa9.04□□□□□ -0.96
PTPN3-201ENST00000262539 TCP1P17987 556 aaKnown RBP9.04□□□□□ -0.96
PTPN3-201ENST00000262539 PRELPP51888 382 aa9.04□□□□□ -0.96
PTPN3-201ENST00000262539 SNX16P57768 344 aa9.04□□□□□ -0.96
PTPN3-201ENST00000262539 PRR16Q569H4 304 aa9.04□□□□□ -0.96
PTPN3-201ENST00000262539 ARMC9Q7Z3E5 817 aa9.04□□□□□ -0.96
PTPN3-201ENST00000262539 NEDD9Q14511 834 aa9.03□□□□□ -0.96
PTPN3-201ENST00000262539 NSMFQ6X4W1 530 aa9.03□□□□□ -0.96
PTPN3-201ENST00000262539 FASTKD5Q7L8L6 764 aaKnown RBP9.03□□□□□ -0.96
PTPN3-201ENST00000262539 STAG2Q8N3U4 1231 aa9.03□□□□□ -0.96
PTPN3-201ENST00000262539 NAP1L3Q99457 506 aaPredicted RBP9.03□□□□□ -0.96
PTPN3-201ENST00000262539 SENP2Q9HC62 589 aa9.03□□□□□ -0.96
PTPN3-201ENST00000262539 CTAGE15A4D2H0 777 aa9.03□□□□□ -0.96
PTPN3-201ENST00000262539 CTAGE8P0CG41 777 aa9.03□□□□□ -0.96
PTPN3-201ENST00000262539 EZH2Q15910 746 aaKnown RBP9.03□□□□□ -0.96
PTPN3-201ENST00000262539 FAM160B1Q5W0V3 765 aa9.03□□□□□ -0.96
PTPN3-201ENST00000262539 CROCCP2Q86T23 111 aa9.03□□□□□ -0.96
PTPN3-201ENST00000262539 CTAGE6Q86UF2 777 aa9.03□□□□□ -0.96
PTPN3-201ENST00000262539 CTAGE4Q8IX94 777 aa9.03□□□□□ -0.96
PTPN3-201ENST00000262539 RNF10Q8N5U6 811 aaKnown RBP9.03□□□□□ -0.96
PTPN3-201ENST00000262539 TRIM58Q8NG06 486 aa9.03□□□□□ -0.96
PTPN3-201ENST00000262539 RPLP2P05387 115 aaKnown RBP9.03□□□□□ -0.96
PTPN3-201ENST00000262539 YWHAEP62258 255 aaKnown RBP9.03□□□□□ -0.96
PTPN3-201ENST00000262539 NFIAQ12857 509 aa9.03□□□□□ -0.96
PTPN3-201ENST00000262539 CENPPQ6IPU0 288 aa9.03□□□□□ -0.96
PTPN3-201ENST00000262539 PTF1AQ7RTS3 328 aa9.03□□□□□ -0.96
PTPN3-201ENST00000262539 GPC2Q8N158 579 aa9.03□□□□□ -0.96
PTPN3-201ENST00000262539 MSANTD4Q8NCY6 345 aa9.03□□□□□ -0.96
PTPN3-201ENST00000262539 MYOZ2Q9NPC6 264 aa9.03□□□□□ -0.96
PTPN3-201ENST00000262539 GTPBP10A4D1E9 387 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms