RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 MTG1Q9BT17 334 aaPredicted RBP21.29■■□□□ 1
CYSTM1-201ENST00000261811 FOXP1Q9H334 677 aaPredicted RBP21.29■■□□□ 1
CYSTM1-201ENST00000261811 NFASCO94856 1347 aa21.28■■□□□ 1
CYSTM1-201ENST00000261811 MROH7Q68CQ1 1323 aa21.28■■□□□ 1
CYSTM1-201ENST00000261811 A0A0U1RQG5 324 aaPredicted RBP21.28■■□□□ 1
CYSTM1-201ENST00000261811 BTBD18B2RXH4 712 aa21.28■■□□□ 1
CYSTM1-201ENST00000261811 FAM86B1E9PN63 330 aa21.28■■□□□ 1
CYSTM1-201ENST00000261811 FAM86B2P0C5J1 330 aa21.28■■□□□ 1
CYSTM1-201ENST00000261811 SEMA3FQ13275 785 aa21.28■■□□□ 1
CYSTM1-201ENST00000261811 CXCL17Q6UXB2 119 aa21.28■■□□□ 1
CYSTM1-201ENST00000261811 SLC39A5Q6ZMH5 540 aa21.28■■□□□ 1
CYSTM1-201ENST00000261811 CYP2W1Q8TAV3 490 aa21.28■■□□□ 1
CYSTM1-201ENST00000261811 OXER1Q8TDS5 423 aa21.28■■□□□ 1
CYSTM1-201ENST00000261811 ZNF577Q9BSK1 485 aa21.28■■□□□ 1
CYSTM1-201ENST00000261811 KATNAL1Q9BW62 490 aa21.28■■□□□ 1
CYSTM1-201ENST00000261811 AGO4Q9HCK5 861 aaKnown RBP21.28■■□□□ 1
CYSTM1-201ENST00000261811 TBC1D22BQ9NU19 505 aa21.28■■□□□ 1
CYSTM1-201ENST00000261811 SCN10AQ9Y5Y9 1956 aa21.27■■□□□ 1
CYSTM1-201ENST00000261811 EVI5O60447 810 aa21.27■□□□□ 0.99
CYSTM1-201ENST00000261811 KCNA2P16389 499 aa21.27■□□□□ 0.99
CYSTM1-201ENST00000261811 ATN1P54259 1190 aaPredicted RBP21.27■□□□□ 0.99
CYSTM1-201ENST00000261811 PURAQ00577 322 aaKnown RBP21.27■□□□□ 0.99
CYSTM1-201ENST00000261811 NR5A1Q13285 461 aa21.27■□□□□ 0.99
CYSTM1-201ENST00000261811 LETM2Q2VYF4 491 aa21.27■□□□□ 0.99
CYSTM1-201ENST00000261811 LARP1BQ659C4 914 aaKnown RBP21.27■□□□□ 0.99
CYSTM1-201ENST00000261811 JPH1Q9HDC5 661 aaPredicted RBP21.27■□□□□ 0.99
CYSTM1-201ENST00000261811 PKD2L1Q9P0L9 805 aa21.27■□□□□ 0.99
CYSTM1-201ENST00000261811 NR2E3Q9Y5X4 410 aa21.27■□□□□ 0.99
CYSTM1-201ENST00000261811 IGLV3-22A0A075B6J6 115 aa21.26■□□□□ 0.99
CYSTM1-201ENST00000261811 CYP3A7-CYP3A51PA0A087WV96 503 aa21.26■□□□□ 0.99
CYSTM1-201ENST00000261811 IPO5O00410 1097 aaKnown RBP21.26■□□□□ 0.99
CYSTM1-201ENST00000261811 SORBS3O60504 671 aa21.26■□□□□ 0.99
CYSTM1-201ENST00000261811 ARP10275 920 aa21.26■□□□□ 0.99
CYSTM1-201ENST00000261811 PTGS1P23219 599 aa21.26■□□□□ 0.99
CYSTM1-201ENST00000261811 CYP3A7P24462 503 aa21.26■□□□□ 0.99
CYSTM1-201ENST00000261811 IRX5P78411 483 aaPredicted RBP21.26■□□□□ 0.99
CYSTM1-201ENST00000261811 Q4G0T1 1027 aa21.26■□□□□ 0.99
CYSTM1-201ENST00000261811 C1orf53Q5VUE5 145 aa21.26■□□□□ 0.99
CYSTM1-201ENST00000261811 PPP4R3AQ6IN85 833 aa21.26■□□□□ 0.99
CYSTM1-201ENST00000261811 SLC9A2Q9UBY0 812 aa21.26■□□□□ 0.99
CYSTM1-201ENST00000261811 PDE4DIPQ5VU43 2346 aa21.26■□□□□ 0.99
CYSTM1-201ENST00000261811 MARCH6O60337 910 aa21.25■□□□□ 0.99
CYSTM1-201ENST00000261811 CCNT1O60563 726 aaKnown RBP21.25■□□□□ 0.99
CYSTM1-201ENST00000261811 ATP9AO75110 1047 aa21.25■□□□□ 0.99
CYSTM1-201ENST00000261811 HSDL1Q3SXM5 330 aa21.25■□□□□ 0.99
CYSTM1-201ENST00000261811 SEPT1Q8WYJ6 367 aa21.25■□□□□ 0.99
CYSTM1-201ENST00000261811 DDX25Q9UHL0 483 aaKnown RBP21.25■□□□□ 0.99
CYSTM1-201ENST00000261811 NOL7Q9UMY1 257 aaKnown RBP21.25■□□□□ 0.99
CYSTM1-201ENST00000261811 TLR3O15455 904 aaKnown RBP21.24■□□□□ 0.99
CYSTM1-201ENST00000261811 SP4Q02446 784 aa21.24■□□□□ 0.99
CYSTM1-201ENST00000261811 ITGA7Q13683 1181 aa21.24■□□□□ 0.99
CYSTM1-201ENST00000261811 MCTP1Q6DN14 999 aa21.24■□□□□ 0.99
CYSTM1-201ENST00000261811 TNFRSF25Q93038 417 aa21.24■□□□□ 0.99
CYSTM1-201ENST00000261811 ZNF215Q9UL58 517 aaPredicted RBP21.24■□□□□ 0.99
CYSTM1-201ENST00000261811 DCDC2CA8MYV0 355 aa21.23■□□□□ 0.99
CYSTM1-201ENST00000261811 ARVCFO00192 962 aa21.23■□□□□ 0.99
CYSTM1-201ENST00000261811 BAG4O95429 457 aaKnown RBP21.23■□□□□ 0.99
CYSTM1-201ENST00000261811 SNX17Q15036 470 aa21.23■□□□□ 0.99
CYSTM1-201ENST00000261811 LRRC26Q2I0M4 334 aa21.23■□□□□ 0.99
CYSTM1-201ENST00000261811 NOSTRINQ8IVI9 506 aa21.23■□□□□ 0.99
CYSTM1-201ENST00000261811 RIT2Q99578 217 aa21.23■□□□□ 0.99
CYSTM1-201ENST00000261811 GPR20Q99678 358 aa21.23■□□□□ 0.99
CYSTM1-201ENST00000261811 PRKAG2Q9UGJ0 569 aa21.23■□□□□ 0.99
CYSTM1-201ENST00000261811 ATP11BQ9Y2G3 1177 aa21.23■□□□□ 0.99
CYSTM1-201ENST00000261811 TDP2O95551 362 aa21.22■□□□□ 0.99
CYSTM1-201ENST00000261811 HOXD8P13378 290 aaPredicted RBP21.22■□□□□ 0.99
CYSTM1-201ENST00000261811 RTP1P59025 263 aa21.22■□□□□ 0.99
CYSTM1-201ENST00000261811 CHMP4BP1P59074 171 aa21.22■□□□□ 0.99
CYSTM1-201ENST00000261811 KRT76Q01546 638 aa21.22■□□□□ 0.99
CYSTM1-201ENST00000261811 TNPO1Q92973 898 aaKnown RBP21.22■□□□□ 0.99
CYSTM1-201ENST00000261811 MBOAT7Q96N66 472 aa21.22■□□□□ 0.99
CYSTM1-201ENST00000261811 AZI2Q9H6S1 392 aa21.22■□□□□ 0.99
CYSTM1-201ENST00000261811 GAS7O60861 476 aa21.21■□□□□ 0.99
CYSTM1-201ENST00000261811 PDIA4P13667 645 aaKnown RBP21.21■□□□□ 0.99
CYSTM1-201ENST00000261811 U2AF2P26368 475 aaKnown RBP eCLIP21.21■□□□□ 0.99
CYSTM1-201ENST00000261811 TCF7P36402 384 aaPredicted RBP21.21■□□□□ 0.99
CYSTM1-201ENST00000261811 TRAPPC10P48553 1259 aa21.21■□□□□ 0.99
CYSTM1-201ENST00000261811 PTPN11Q06124 597 aaPredicted RBP21.21■□□□□ 0.99
CYSTM1-201ENST00000261811 BECN1Q14457 450 aa21.21■□□□□ 0.99
CYSTM1-201ENST00000261811 LRCH2Q5VUJ6 765 aa21.21■□□□□ 0.99
CYSTM1-201ENST00000261811 NFRKBQ6P4R8 1299 aa21.21■□□□□ 0.99
CYSTM1-201ENST00000261811 FAM20AQ96MK3 541 aa21.21■□□□□ 0.99
CYSTM1-201ENST00000261811 TOX2Q96NM4 488 aa21.21■□□□□ 0.99
CYSTM1-201ENST00000261811 TEKT3Q9BXF9 490 aa21.21■□□□□ 0.99
CYSTM1-201ENST00000261811 H3BRB1 525 aa21.2■□□□□ 0.98
CYSTM1-201ENST00000261811 DDX39AO00148 427 aaKnown RBP21.2■□□□□ 0.98
CYSTM1-201ENST00000261811 TBX3O15119 743 aa21.2■□□□□ 0.98
CYSTM1-201ENST00000261811 MSH4O15457 936 aa21.2■□□□□ 0.98
CYSTM1-201ENST00000261811 LGALS2P05162 132 aa21.2■□□□□ 0.98
CYSTM1-201ENST00000261811 ACTR2P61160 394 aa21.2■□□□□ 0.98
CYSTM1-201ENST00000261811 ITGB3BPQ13352 177 aaPredicted RBP21.2■□□□□ 0.98
CYSTM1-201ENST00000261811 ORC2Q13416 577 aaPredicted RBP21.2■□□□□ 0.98
CYSTM1-201ENST00000261811 TRIM60Q495X7 471 aa21.2■□□□□ 0.98
CYSTM1-201ENST00000261811 FAM47CQ5HY64 1035 aa21.2■□□□□ 0.98
CYSTM1-201ENST00000261811 ZNF746Q6NUN9 644 aaPredicted RBP21.2■□□□□ 0.98
CYSTM1-201ENST00000261811 MIS18BP1Q6P0N0 1132 aa21.2■□□□□ 0.98
CYSTM1-201ENST00000261811 SMAP1Q8IYB5 467 aaPredicted RBP21.2■□□□□ 0.98
CYSTM1-201ENST00000261811 SLFN12Q8IYM2 578 aa21.2■□□□□ 0.98
CYSTM1-201ENST00000261811 C7orf61Q8IZ16 206 aa21.2■□□□□ 0.98
CYSTM1-201ENST00000261811 C7orf31Q8N865 590 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms