RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 TSHZ3Q63HK5 1081 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 ARMCX5Q6P1M9 558 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 TPH2Q8IWU9 490 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 CYP26B1Q9NR63 512 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 MROH7-TTC4A0A0A0MT08 1334 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 PAMP19021 973 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 PIK3CAP42336 1068 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 EMBQ6PCB8 327 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 RBM41Q96IZ5 413 aaKnown RBP4.68□□□□□ -1.66
VPS13C-202ENST00000261517 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.68□□□□□ -1.66
VPS13C-202ENST00000261517 PRDM16Q9HAZ2 1276 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 NDE1Q9NXR1 346 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 ASIC3Q9UHC3 531 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 AFDNP55196 1824 aaKnown RBP4.68□□□□□ -1.66
VPS13C-202ENST00000261517 CCDC151A5D8V7 595 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 PSMD3O43242 534 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 GRIN3BO60391 1043 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 PFKFB3Q16875 520 aaPredicted RBP4.68□□□□□ -1.66
VPS13C-202ENST00000261517 HHATQ5VTY9 493 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 MICAL1Q8TDZ2 1067 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 EPS15L1Q9UBC2 864 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 FLT1P17948 1338 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 ESYT2A0FGR8 921 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 RGS16O15492 202 aaPredicted RBP4.68□□□□□ -1.66
VPS13C-202ENST00000261517 HNRNPCL1O60812 293 aaKnown RBP4.68□□□□□ -1.66
VPS13C-202ENST00000261517 ADAM9Q13443 819 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 LSM14BQ9BX40 385 aaKnown RBP4.68□□□□□ -1.66
VPS13C-202ENST00000261517 CCDC68Q9H2F9 335 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 ATP6V0A4Q9HBG4 840 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 A0A1W2PQC6 194 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 ASAP2O43150 1006 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 KRT3P12035 628 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 NECTIN1Q15223 517 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 TRMT44Q8IYL2 757 aaKnown RBP4.68□□□□□ -1.66
VPS13C-202ENST00000261517 HELBQ8NG08 1087 aaPredicted RBP4.68□□□□□ -1.66
VPS13C-202ENST00000261517 UBLCP1Q8WVY7 318 aaPredicted RBP4.68□□□□□ -1.66
VPS13C-202ENST00000261517 KRT12Q99456 494 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 PANK2Q9BZ23 570 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 SENP1Q9P0U3 644 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 OATP04181 439 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 COPB1P53618 953 aaKnown RBP4.68□□□□□ -1.66
VPS13C-202ENST00000261517 STRIP1Q5VSL9 837 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 TTLL11Q8NHH1 800 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 ATRIPQ8WXE1 791 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 KATNAL1Q9BW62 490 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 RIPOR2Q9Y4F9 1068 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.68□□□□□ -1.66
VPS13C-202ENST00000261517 LMO7Q8WWI1 1683 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 KIF13AQ9H1H9 1805 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 MYO1FO00160 1098 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 NSMFQ6X4W1 530 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 FBXL16Q8N461 479 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 CAPN15O75808 1086 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 MYCLP12524 364 aaPredicted RBP4.68□□□□□ -1.66
VPS13C-202ENST00000261517 ATF2P15336 505 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 PTGS1P23219 599 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 PPP2R5DQ14738 602 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 NSUN6Q8TEA1 469 aaKnown RBP4.68□□□□□ -1.66
VPS13C-202ENST00000261517 SLF1Q9BQI6 1058 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 TACO1Q9BSH4 297 aaKnown RBP4.68□□□□□ -1.66
VPS13C-202ENST00000261517 GREM2Q9H772 168 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 GDPD2Q9HCC8 539 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 PRR36Q9H6K5 1346 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 CEMIPQ8WUJ3 1361 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 MCF2LO15068 1137 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 MAGEB2O15479 319 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 APOA4P06727 396 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 PRR16Q569H4 304 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 EFHD1Q9BUP0 239 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 OSBPL5Q9H0X9 879 aaPredicted RBP4.68□□□□□ -1.66
VPS13C-202ENST00000261517 DDX56Q9NY93 547 aaKnown RBP4.68□□□□□ -1.66
VPS13C-202ENST00000261517 PCDHB8Q9UN66 801 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 HEXIM1O94992 359 aaKnown RBP4.67□□□□□ -1.66
VPS13C-202ENST00000261517 SKIDA1Q1XH10 827 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 TUBGCP2Q9BSJ2 902 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 UTP6Q9NYH9 597 aaKnown RBP4.67□□□□□ -1.66
VPS13C-202ENST00000261517 ZNF212Q9UDV6 495 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 SERPINA10Q9UK55 444 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 PCDHA7Q9UN72 937 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 PGRMC1O00264 195 aaKnown RBP4.67□□□□□ -1.66
VPS13C-202ENST00000261517 S100BP04271 92 aaPredicted RBP4.67□□□□□ -1.66
VPS13C-202ENST00000261517 KLHL14Q9P2G3 628 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 WDR35Q9P2L0 1181 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 MCM6Q14566 821 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 RRAGAQ7L523 313 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 CEP72Q9P209 647 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 CDC23Q9UJX2 597 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 NFU1Q9UMS0 254 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 ZWINTO95229 277 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 CTDSPL2Q05D32 466 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 FAM102BQ5T8I3 360 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 LINC00301Q8NCQ3 95 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 SNX25Q9H3E2 840 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.67□□□□□ -1.66
VPS13C-202ENST00000261517 SLC25A27O95847 323 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 PTPN12Q05209 780 aaKnown RBP4.67□□□□□ -1.66
VPS13C-202ENST00000261517 NUDT18Q6ZVK8 323 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 C2orf69Q8N8R5 385 aa4.67□□□□□ -1.66
VPS13C-202ENST00000261517 NSUN7Q8NE18 718 aaKnown RBP4.67□□□□□ -1.66
VPS13C-202ENST00000261517 APBB2Q92870 758 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms