RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 TATP17735 454 aaPredicted RBP7.91□□□□□ -1.14
CSDE1-201ENST00000261443 ABL2P42684 1182 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 RCAN1P53805 252 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 MAP3K12Q12852 859 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 VWA3BQ502W6 1294 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 MFN1Q8IWA4 741 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 LRRC34Q8IZ02 419 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 ECT2Q9H8V3 914 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 ABCF3Q9NUQ8 709 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 STK38LQ9Y2H1 464 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 IGF2BP3O00425 579 aaKnown RBP eCLIP7.91□□□□□ -1.143e-6■■■□□ 19.1
CSDE1-201ENST00000261443 PRPF3O43395 683 aaKnown RBP7.91□□□□□ -1.14
CSDE1-201ENST00000261443 UBOX5O94941 541 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 UPP2O95045 317 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 MBD4O95243 580 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 GNAT1P11488 350 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 DHX9Q08211 1270 aaKnown RBP7.91□□□□□ -1.14
CSDE1-201ENST00000261443 PSMD2Q13200 908 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 NAB2Q15742 525 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 ASTE1Q2TB18 679 aaPredicted RBP7.91□□□□□ -1.14
CSDE1-201ENST00000261443 CWF19L1Q69YN2 538 aaKnown RBP7.91□□□□□ -1.14
CSDE1-201ENST00000261443 TMC3Q7Z5M5 1100 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 CCDC84Q86UT8 332 aaPredicted RBP7.91□□□□□ -1.14
CSDE1-201ENST00000261443 TEX9Q8N6V9 391 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 TLCD1Q96CP7 247 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 FAM210AQ96ND0 272 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 TMEM59LQ9UK28 342 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 MYH1P12882 1939 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 SSU72P8A0A1W2PR75 194 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 A8MUI8 341 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 F8VZ95 297 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 DAPK3O43293 454 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 RTN3O95197 1032 aaPredicted RBP7.91□□□□□ -1.14
CSDE1-201ENST00000261443 MYL1P05976 194 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 KLRC1P26715 233 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 NCALDP61601 193 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 ATP11AP98196 1134 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 PDE4DQ08499 809 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 PPP2R5BQ15173 497 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 SLC5A9Q2M3M2 681 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 NAALADL2Q58DX5 795 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 METTL24Q5JXM2 366 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 ARL6IP4Q66PJ3 421 aaKnown RBP7.91□□□□□ -1.14
CSDE1-201ENST00000261443 TRIM68Q6AZZ1 485 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 NBPF5PQ86XG9 351 aaPredicted RBP7.91□□□□□ -1.14
CSDE1-201ENST00000261443 KLHL29Q96CT2 875 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 AP1M1Q9BXS5 423 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 NSRP1Q9H0G5 558 aaKnown RBP7.91□□□□□ -1.14
CSDE1-201ENST00000261443 ARMT1Q9H993 441 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 LRRC4CQ9HCJ2 640 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 GGT7Q9UJ14 662 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 SPATA31A3Q5VYP0 1347 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.9□□□□□ -1.14
CSDE1-201ENST00000261443 RTL9Q8NET4 1388 aa7.9□□□□□ -1.14
CSDE1-201ENST00000261443 TCRBV5S4A2TA0A5A2 114 aa7.9□□□□□ -1.14
CSDE1-201ENST00000261443 CEP104O60308 925 aa7.9□□□□□ -1.14
CSDE1-201ENST00000261443 PLEKHA8P1O95397 391 aa7.9□□□□□ -1.14
CSDE1-201ENST00000261443 RARAP10276 462 aa7.9□□□□□ -1.14
CSDE1-201ENST00000261443 TRAPPC10P48553 1259 aa7.9□□□□□ -1.14
CSDE1-201ENST00000261443 EIF3BP55884 814 aaKnown RBP7.9□□□□□ -1.14
CSDE1-201ENST00000261443 NLRP5P59047 1200 aa7.9□□□□□ -1.14
CSDE1-201ENST00000261443 LACTBP83111 547 aaPredicted RBP7.9□□□□□ -1.14
CSDE1-201ENST00000261443 ROR2Q01974 943 aaKnown RBP7.9□□□□□ -1.14
CSDE1-201ENST00000261443 MKRN4PQ13434 485 aaPredicted RBP7.9□□□□□ -1.14
CSDE1-201ENST00000261443 SEPT2Q15019 361 aa7.9□□□□□ -1.14
CSDE1-201ENST00000261443 RPS6KA1Q15418 735 aa7.9□□□□□ -1.14
CSDE1-201ENST00000261443 NPY5RQ15761 445 aa7.9□□□□□ -1.14
CSDE1-201ENST00000261443 KCTD19Q17RG1 926 aaPredicted RBP7.9□□□□□ -1.14
CSDE1-201ENST00000261443 PDXDC1Q6P996 788 aa7.9□□□□□ -1.14
CSDE1-201ENST00000261443 GIGYF2Q6Y7W6 1299 aaKnown RBP7.9□□□□□ -1.14
CSDE1-201ENST00000261443 HOOK3Q86VS8 718 aa7.9□□□□□ -1.14
CSDE1-201ENST00000261443 KCNV2Q8TDN2 545 aa7.9□□□□□ -1.14
CSDE1-201ENST00000261443 BAP1Q92560 729 aa7.9□□□□□ -1.14
CSDE1-201ENST00000261443 NAF1Q96HR8 494 aaKnown RBP7.9□□□□□ -1.14
CSDE1-201ENST00000261443 ZBTB3Q9H5J0 574 aa7.9□□□□□ -1.14
CSDE1-201ENST00000261443 FBXO3Q9UK99 471 aa7.9□□□□□ -1.14
CSDE1-201ENST00000261443 TOGARAM1Q9Y4F4 1720 aa7.9□□□□□ -1.14
CSDE1-201ENST00000261443 AKAP11Q9UKA4 1901 aa7.9□□□□□ -1.14
CSDE1-201ENST00000261443 LRRD1A4D1F6 860 aa7.9□□□□□ -1.14
CSDE1-201ENST00000261443 DPPA5A6NC42 116 aa7.9□□□□□ -1.14
CSDE1-201ENST00000261443 PP2D1A8MPX8 630 aa7.9□□□□□ -1.14
CSDE1-201ENST00000261443 KRT16P08779 473 aa7.9□□□□□ -1.14
CSDE1-201ENST00000261443 ITGA6P23229 1130 aa7.9□□□□□ -1.14
CSDE1-201ENST00000261443 UBA7P41226 1012 aa7.9□□□□□ -1.14
CSDE1-201ENST00000261443 MXRA7P84157 204 aa7.9□□□□□ -1.14
CSDE1-201ENST00000261443 KIAA0753Q2KHM9 967 aa7.9□□□□□ -1.14
CSDE1-201ENST00000261443 SLC9C1Q4G0N8 1177 aa7.9□□□□□ -1.14
CSDE1-201ENST00000261443 ZC3H12AQ5D1E8 599 aaKnown RBP7.9□□□□□ -1.14
CSDE1-201ENST00000261443 KIF2BQ8N4N8 673 aa7.9□□□□□ -1.14
CSDE1-201ENST00000261443 ZNF526Q8TF50 670 aaPredicted RBP7.9□□□□□ -1.14
CSDE1-201ENST00000261443 SCFD2Q8WU76 684 aa7.9□□□□□ -1.14
CSDE1-201ENST00000261443 MOV10L1Q9BXT6 1211 aaKnown RBP7.9□□□□□ -1.14
CSDE1-201ENST00000261443 DDX47Q9H0S4 455 aaKnown RBP7.9□□□□□ -1.14
CSDE1-201ENST00000261443 INTS9Q9NV88 658 aaKnown RBP7.9□□□□□ -1.14
CSDE1-201ENST00000261443 ATP8A1Q9Y2Q0 1164 aa7.9□□□□□ -1.14
CSDE1-201ENST00000261443 TNKSO95271 1327 aa7.9□□□□□ -1.15
CSDE1-201ENST00000261443 GSG1L2A8MUP6 293 aa7.9□□□□□ -1.15
CSDE1-201ENST00000261443 RBAK-RBAKDNI3L0D1 243 aa7.9□□□□□ -1.15
CSDE1-201ENST00000261443 PRKAB2O43741 272 aa7.9□□□□□ -1.15
CSDE1-201ENST00000261443 PCCAP05165 728 aaPredicted RBP7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms