RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 GHRHRQ02643 423 aa21.08■□□□□ 0.96
COL4A3BP-201ENST00000261415 PLS1Q14651 629 aa21.08■□□□□ 0.96
COL4A3BP-201ENST00000261415 MCF2L2Q86YR7 1114 aa21.08■□□□□ 0.96
COL4A3BP-201ENST00000261415 RASAL3Q86YV0 1011 aa21.08■□□□□ 0.96
COL4A3BP-201ENST00000261415 BRI3BPQ8WY22 251 aa21.08■□□□□ 0.96
COL4A3BP-201ENST00000261415 STAT3P40763 770 aa21.07■□□□□ 0.96
COL4A3BP-201ENST00000261415 STX1AQ16623 288 aa21.07■□□□□ 0.96
COL4A3BP-201ENST00000261415 FCHSD1Q86WN1 690 aa21.07■□□□□ 0.96
COL4A3BP-201ENST00000261415 BTBD7Q9P203 1132 aa21.07■□□□□ 0.96
COL4A3BP-201ENST00000261415 FBXO2Q9UK22 296 aaPredicted RBP21.07■□□□□ 0.96
COL4A3BP-201ENST00000261415 CCDC151A5D8V7 595 aa21.07■□□□□ 0.96
COL4A3BP-201ENST00000261415 CTAGE5O15320 804 aa21.07■□□□□ 0.96
COL4A3BP-201ENST00000261415 EIF3JO75822 258 aaKnown RBP21.07■□□□□ 0.96
COL4A3BP-201ENST00000261415 KRI1Q8N9T8 703 aaKnown RBP21.07■□□□□ 0.96
COL4A3BP-201ENST00000261415 CARD6Q9BX69 1037 aa21.07■□□□□ 0.96
COL4A3BP-201ENST00000261415 PPP1R12AO14974 1030 aaPredicted RBP21.06■□□□□ 0.96
COL4A3BP-201ENST00000261415 PEX10O60683 326 aa21.06■□□□□ 0.96
COL4A3BP-201ENST00000261415 BRD3Q15059 726 aa21.06■□□□□ 0.96
COL4A3BP-201ENST00000261415 RGMBQ6NW40 437 aa21.06■□□□□ 0.96
COL4A3BP-201ENST00000261415 CRYGNQ8WXF5 182 aa21.06■□□□□ 0.96
COL4A3BP-201ENST00000261415 RABGGTAQ92696 567 aa21.06■□□□□ 0.96
COL4A3BP-201ENST00000261415 PNMA3Q9UL41 463 aa21.06■□□□□ 0.96
COL4A3BP-201ENST00000261415 A0A1W2PQ27 194 aa21.06■□□□□ 0.96
COL4A3BP-201ENST00000261415 A0A1W2PQ64 194 aa21.06■□□□□ 0.96
COL4A3BP-201ENST00000261415 A0A1W2PQD8 194 aa21.06■□□□□ 0.96
COL4A3BP-201ENST00000261415 CCDC189A1A4V9 331 aa21.06■□□□□ 0.96
COL4A3BP-201ENST00000261415 BTBD19C9JJ37 291 aa21.06■□□□□ 0.96
COL4A3BP-201ENST00000261415 URI1O94763 535 aaPredicted RBP21.06■□□□□ 0.96
COL4A3BP-201ENST00000261415 PTPREP23469 700 aa21.06■□□□□ 0.96
COL4A3BP-201ENST00000261415 SREBF1P36956 1147 aa21.06■□□□□ 0.96
COL4A3BP-201ENST00000261415 C4orf32Q8N8J7 132 aa21.06■□□□□ 0.96
COL4A3BP-201ENST00000261415 CLIC6Q96NY7 704 aa21.06■□□□□ 0.96
COL4A3BP-201ENST00000261415 VPS18Q9P253 973 aa21.06■□□□□ 0.96
COL4A3BP-201ENST00000261415 SLC45A1Q9Y2W3 748 aa21.06■□□□□ 0.96
COL4A3BP-201ENST00000261415 TLL2Q9Y6L7 1015 aa21.06■□□□□ 0.96
COL4A3BP-201ENST00000261415 H3BQF6 201 aa21.05■□□□□ 0.96
COL4A3BP-201ENST00000261415 PDHXO00330 501 aa21.05■□□□□ 0.96
COL4A3BP-201ENST00000261415 CUTAO60888 179 aa21.05■□□□□ 0.96
COL4A3BP-201ENST00000261415 TDP2O95551 362 aa21.05■□□□□ 0.96
COL4A3BP-201ENST00000261415 ARHGAP4P98171 946 aa21.05■□□□□ 0.96
COL4A3BP-201ENST00000261415 ORC2Q13416 577 aaPredicted RBP21.05■□□□□ 0.96
COL4A3BP-201ENST00000261415 TKFCQ3LXA3 575 aa21.05■□□□□ 0.96
COL4A3BP-201ENST00000261415 CCAR1Q8IX12 1150 aaKnown RBP21.05■□□□□ 0.96
COL4A3BP-201ENST00000261415 PAGR1Q9BTK6 254 aa21.05■□□□□ 0.96
COL4A3BP-201ENST00000261415 MAP3K20Q9NYL2 800 aaKnown RBP21.05■□□□□ 0.96
COL4A3BP-201ENST00000261415 SRPRBQ9Y5M8 271 aaKnown RBP21.05■□□□□ 0.96
COL4A3BP-201ENST00000261415 SFPQP23246 707 aaKnown RBP eCLIP21.04■□□□□ 0.96
COL4A3BP-201ENST00000261415 USP11P51784 963 aa21.04■□□□□ 0.96
COL4A3BP-201ENST00000261415 GRIN1Q05586 938 aa21.04■□□□□ 0.96
COL4A3BP-201ENST00000261415 LONRF2Q1L5Z9 754 aa21.04■□□□□ 0.96
COL4A3BP-201ENST00000261415 ANKRD23Q86SG2 305 aa21.04■□□□□ 0.96
COL4A3BP-201ENST00000261415 SAMD3Q8N6K7 520 aa21.04■□□□□ 0.96
COL4A3BP-201ENST00000261415 TMEM60Q9H2L4 133 aa21.04■□□□□ 0.96
COL4A3BP-201ENST00000261415 KIAA1217Q5T5P2 1943 aa21.04■□□□□ 0.96
COL4A3BP-201ENST00000261415 CNMDO75829 334 aa21.04■□□□□ 0.96
COL4A3BP-201ENST00000261415 RPS6P62753 249 aaKnown RBP21.04■□□□□ 0.96
COL4A3BP-201ENST00000261415 DNAJC21Q5F1R6 531 aaKnown RBP21.04■□□□□ 0.96
COL4A3BP-201ENST00000261415 PPP4R3AQ6IN85 833 aa21.04■□□□□ 0.96
COL4A3BP-201ENST00000261415 FERMT2Q96AC1 680 aa21.04■□□□□ 0.96
COL4A3BP-201ENST00000261415 SPATC1LQ9H0A9 340 aa21.04■□□□□ 0.96
COL4A3BP-201ENST00000261415 ACAD9Q9H845 621 aa21.04■□□□□ 0.96
COL4A3BP-201ENST00000261415 COL20A1Q9P218 1284 aa21.04■□□□□ 0.96
COL4A3BP-201ENST00000261415 PLXNB2O15031 1838 aa21.03■□□□□ 0.96
COL4A3BP-201ENST00000261415 CYP2C8P10632 490 aa21.03■□□□□ 0.96
COL4A3BP-201ENST00000261415 NSMFQ6X4W1 530 aa21.03■□□□□ 0.96
COL4A3BP-201ENST00000261415 RNF207Q6ZRF8 634 aa21.03■□□□□ 0.96
COL4A3BP-201ENST00000261415 FSIP1Q8NA03 581 aa21.03■□□□□ 0.96
COL4A3BP-201ENST00000261415 MRPS27Q92552 414 aaKnown RBP21.03■□□□□ 0.96
COL4A3BP-201ENST00000261415 GOLPH3LQ9H4A5 285 aa21.03■□□□□ 0.96
COL4A3BP-201ENST00000261415 LAD1O00515 517 aa21.03■□□□□ 0.96
COL4A3BP-201ENST00000261415 SLC37A4O43826 429 aa21.03■□□□□ 0.96
COL4A3BP-201ENST00000261415 PPFIA4O75335 1185 aa21.03■□□□□ 0.96
COL4A3BP-201ENST00000261415 GCFC2P16383 781 aaKnown RBP21.03■□□□□ 0.96
COL4A3BP-201ENST00000261415 MNAT1P51948 309 aa21.03■□□□□ 0.96
COL4A3BP-201ENST00000261415 LRCH2Q5VUJ6 765 aa21.03■□□□□ 0.96
COL4A3BP-201ENST00000261415 ARL6IP4Q66PJ3 421 aaKnown RBP21.03■□□□□ 0.96
COL4A3BP-201ENST00000261415 SHC4Q6S5L8 630 aa21.03■□□□□ 0.96
COL4A3BP-201ENST00000261415 SLC30A10Q6XR72 485 aa21.03■□□□□ 0.96
COL4A3BP-201ENST00000261415 POTEDQ86YR6 584 aa21.03■□□□□ 0.96
COL4A3BP-201ENST00000261415 RIOX2Q8IUF8 465 aa21.03■□□□□ 0.96
COL4A3BP-201ENST00000261415 HNRNPLLQ8WVV9 542 aaKnown RBP21.03■□□□□ 0.96
COL4A3BP-201ENST00000261415 NAP1L4Q99733 375 aaKnown RBP21.03■□□□□ 0.96
COL4A3BP-201ENST00000261415 PARD6BQ9BYG5 372 aa21.03■□□□□ 0.96
COL4A3BP-201ENST00000261415 TXNRD2Q9NNW7 524 aa21.03■□□□□ 0.96
COL4A3BP-201ENST00000261415 RBPJLQ9UBG7 517 aa21.03■□□□□ 0.96
COL4A3BP-201ENST00000261415 TMEM88BA6NKF7 163 aa21.02■□□□□ 0.96
COL4A3BP-201ENST00000261415 NR1I2O75469 434 aa21.02■□□□□ 0.96
COL4A3BP-201ENST00000261415 CMA1P23946 247 aa21.02■□□□□ 0.96
COL4A3BP-201ENST00000261415 YY1P25490 414 aa21.02■□□□□ 0.96
COL4A3BP-201ENST00000261415 SYTL5Q8TDW5 730 aaPredicted RBP21.02■□□□□ 0.96
COL4A3BP-201ENST00000261415 PTPN18Q99952 460 aa21.02■□□□□ 0.96
COL4A3BP-201ENST00000261415 EHMT1Q9H9B1 1298 aa21.02■□□□□ 0.96
COL4A3BP-201ENST00000261415 ABT1Q9ULW3 272 aaKnown RBP21.02■□□□□ 0.96
COL4A3BP-201ENST00000261415 RABGAP1Q9Y3P9 1069 aa21.02■□□□□ 0.96
COL4A3BP-201ENST00000261415 SLC10A3P09131 477 aa21.02■□□□□ 0.95
COL4A3BP-201ENST00000261415 RSRC2Q7L4I2 434 aaKnown RBP21.02■□□□□ 0.95
COL4A3BP-201ENST00000261415 HDXQ7Z353 690 aa21.02■□□□□ 0.95
COL4A3BP-201ENST00000261415 MICALL1Q8N3F8 863 aa21.02■□□□□ 0.95
COL4A3BP-201ENST00000261415 ZNF579Q8NAF0 562 aaKnown RBP21.02■□□□□ 0.95
COL4A3BP-201ENST00000261415 CHST13Q8NET6 341 aa21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms