RNA–Protein interactions for RNA: ENST00000261407.8

LPCAT3-201, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT3, Length 2,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-201ENST00000261407 TSG101Q99816 390 aa21.3■■□□□ 1
LPCAT3-201ENST00000261407 COL4A3BPQ9Y5P4 624 aa21.3■■□□□ 1
LPCAT3-201ENST00000261407 COL11A2P13942 1736 aaPredicted RBP21.3■■□□□ 1
LPCAT3-201ENST00000261407 BRWD3Q6RI45 1802 aa21.3■■□□□ 1
LPCAT3-201ENST00000261407 SCN9AQ15858 1988 aa21.3■■□□□ 1
LPCAT3-201ENST00000261407 CYP2C19P33261 490 aa21.3■■□□□ 1
LPCAT3-201ENST00000261407 CASP5P51878 434 aa21.3■■□□□ 1
LPCAT3-201ENST00000261407 FKBP3Q00688 224 aaKnown RBP21.3■■□□□ 1
LPCAT3-201ENST00000261407 PSMB7Q99436 277 aa21.3■■□□□ 1
LPCAT3-201ENST00000261407 DEF6Q9H4E7 631 aa21.3■■□□□ 1
LPCAT3-201ENST00000261407 TDRD3Q9H7E2 651 aaKnown RBP21.3■■□□□ 1
LPCAT3-201ENST00000261407 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.3■■□□□ 1
LPCAT3-201ENST00000261407 FAM86B1E9PN63 330 aa21.29■■□□□ 1
LPCAT3-201ENST00000261407 AKR1B10O60218 316 aa21.29■■□□□ 1
LPCAT3-201ENST00000261407 ECE2O60344 883 aa21.29■■□□□ 1
LPCAT3-201ENST00000261407 NOL4O94818 638 aa21.29■■□□□ 1
LPCAT3-201ENST00000261407 FGFR1OPO95684 399 aaKnown RBP21.29■■□□□ 1
LPCAT3-201ENST00000261407 FAM86B2P0C5J1 330 aa21.29■■□□□ 1
LPCAT3-201ENST00000261407 HOXA13P31271 388 aaPredicted RBP21.29■■□□□ 1
LPCAT3-201ENST00000261407 CCDC40Q4G0X9 1142 aa21.29■■□□□ 1
LPCAT3-201ENST00000261407 HDXQ7Z353 690 aa21.29■■□□□ 1
LPCAT3-201ENST00000261407 CCDC84Q86UT8 332 aaPredicted RBP21.29■■□□□ 1
LPCAT3-201ENST00000261407 CATSPER3Q86XQ3 398 aa21.29■■□□□ 1
LPCAT3-201ENST00000261407 SPICE1Q8N0Z3 855 aa21.29■■□□□ 1
LPCAT3-201ENST00000261407 AKT1S1Q96B36 256 aa21.29■■□□□ 1
LPCAT3-201ENST00000261407 LRRC27Q9C0I9 530 aa21.29■■□□□ 1
LPCAT3-201ENST00000261407 NT5C3AQ9H0P0 336 aa21.29■■□□□ 1
LPCAT3-201ENST00000261407 TMX4Q9H1E5 349 aaPredicted RBP21.29■■□□□ 1
LPCAT3-201ENST00000261407 NYAP2Q9P242 653 aa21.29■■□□□ 1
LPCAT3-201ENST00000261407 LRRIQ3A6PVS8 624 aaPredicted RBP21.29■■□□□ 1
LPCAT3-201ENST00000261407 USP14P54578 494 aa21.29■■□□□ 1
LPCAT3-201ENST00000261407 ARHGAP4P98171 946 aa21.29■■□□□ 1
LPCAT3-201ENST00000261407 SPIRE1Q08AE8 756 aa21.29■■□□□ 1
LPCAT3-201ENST00000261407 GDAP1L1Q96MZ0 367 aa21.29■■□□□ 1
LPCAT3-201ENST00000261407 BMP2KQ9NSY1 1161 aaPredicted RBP21.29■■□□□ 1
LPCAT3-201ENST00000261407 UTRNP46939 3433 aa21.28■■□□□ 1
LPCAT3-201ENST00000261407 USP11P51784 963 aa21.28■■□□□ 1
LPCAT3-201ENST00000261407 IKQ13123 557 aaPredicted RBP21.28■■□□□ 1
LPCAT3-201ENST00000261407 CASP8Q14790 479 aa21.28■■□□□ 1
LPCAT3-201ENST00000261407 HGSNATQ68CP4 663 aa21.28■■□□□ 1
LPCAT3-201ENST00000261407 TATDN1Q6P1N9 297 aa21.28■■□□□ 1
LPCAT3-201ENST00000261407 CACNA2D4Q7Z3S7 1137 aa21.28■■□□□ 1
LPCAT3-201ENST00000261407 EHBP1Q8NDI1 1231 aa21.28■■□□□ 1
LPCAT3-201ENST00000261407 NEK11Q8NG66 645 aa21.28■■□□□ 1
LPCAT3-201ENST00000261407 ETNPPLQ8TBG4 499 aa21.28■■□□□ 1
LPCAT3-201ENST00000261407 COG1Q8WTW3 980 aa21.28■■□□□ 1
LPCAT3-201ENST00000261407 DCAF4Q8WV16 495 aa21.28■■□□□ 1
LPCAT3-201ENST00000261407 CRYGNQ8WXF5 182 aa21.28■■□□□ 1
LPCAT3-201ENST00000261407 DHX36Q9H2U1 1008 aaKnown RBP21.28■■□□□ 1
LPCAT3-201ENST00000261407 SH2D4AQ9H788 454 aa21.28■■□□□ 1
LPCAT3-201ENST00000261407 C10orf71Q711Q0 1435 aa21.28■■□□□ 1
LPCAT3-201ENST00000261407 TLR2O60603 784 aa21.27■■□□□ 1
LPCAT3-201ENST00000261407 ERLIN1O75477 346 aa21.27■■□□□ 1
LPCAT3-201ENST00000261407 NDUFB10O96000 172 aa21.27■■□□□ 1
LPCAT3-201ENST00000261407 CXCR5P32302 372 aa21.27■■□□□ 1
LPCAT3-201ENST00000261407 SLC12A3P55017 1021 aa21.27■■□□□ 1
LPCAT3-201ENST00000261407 MRPS25P82663 173 aaKnown RBP21.27■■□□□ 1
LPCAT3-201ENST00000261407 C2orf54Q08AI8 447 aa21.27■■□□□ 1
LPCAT3-201ENST00000261407 PDXDC1Q6P996 788 aa21.27■■□□□ 1
LPCAT3-201ENST00000261407 LENG9Q96B70 501 aa21.27■■□□□ 1
LPCAT3-201ENST00000261407 IDI2Q9BXS1 227 aa21.27■■□□□ 1
LPCAT3-201ENST00000261407 KCTD10Q9H3F6 313 aa21.27■■□□□ 1
LPCAT3-201ENST00000261407 EMILIN3Q9NT22 766 aa21.27■■□□□ 1
LPCAT3-201ENST00000261407 SMARCAL1Q9NZC9 954 aa21.27■■□□□ 1
LPCAT3-201ENST00000261407 SMCHD1A6NHR9 2005 aa21.27■■□□□ 1
LPCAT3-201ENST00000261407 ABCB11O95342 1321 aa21.27■■□□□ 1
LPCAT3-201ENST00000261407 KDM3AQ9Y4C1 1321 aa21.27■■□□□ 1
LPCAT3-201ENST00000261407 CYP3A7-CYP3A51PA0A087WV96 503 aa21.27■■□□□ 1
LPCAT3-201ENST00000261407 CYP3A7P24462 503 aa21.27■■□□□ 1
LPCAT3-201ENST00000261407 CHRNA5P30532 468 aa21.27■■□□□ 1
LPCAT3-201ENST00000261407 PABPC4Q13310 644 aaKnown RBP eCLIP21.27■■□□□ 1
LPCAT3-201ENST00000261407 STRIP1Q5VSL9 837 aa21.27■■□□□ 1
LPCAT3-201ENST00000261407 GSPT2Q8IYD1 628 aaKnown RBP21.27■■□□□ 1
LPCAT3-201ENST00000261407 TRIM34Q9BYJ4 488 aa21.27■■□□□ 1
LPCAT3-201ENST00000261407 MYH10P35580 1976 aa21.27■■□□□ 1
LPCAT3-201ENST00000261407 A0A1W2PRG0 241 aa21.26■□□□□ 0.99
LPCAT3-201ENST00000261407 OPLAHO14841 1288 aa21.26■□□□□ 0.99
LPCAT3-201ENST00000261407 GH2P01242 217 aa21.26■□□□□ 0.99
LPCAT3-201ENST00000261407 RASSF7Q02833 373 aa21.26■□□□□ 0.99
LPCAT3-201ENST00000261407 AOC3Q16853 763 aa21.26■□□□□ 0.99
LPCAT3-201ENST00000261407 ASTE1Q2TB18 679 aaPredicted RBP21.26■□□□□ 0.99
LPCAT3-201ENST00000261407 CCDC65Q8IXS2 484 aa21.26■□□□□ 0.99
LPCAT3-201ENST00000261407 CAGE1Q8TC20 777 aa21.26■□□□□ 0.99
LPCAT3-201ENST00000261407 EHD2Q9NZN4 543 aa21.26■□□□□ 0.99
LPCAT3-201ENST00000261407 NCK2O43639 380 aa21.26■□□□□ 0.99
LPCAT3-201ENST00000261407 KRT18P05783 430 aaKnown RBP21.26■□□□□ 0.99
LPCAT3-201ENST00000261407 SPATA31C1P0DKV0 1188 aa21.26■□□□□ 0.99
LPCAT3-201ENST00000261407 POLR2FP61218 127 aaKnown RBP21.26■□□□□ 0.99
LPCAT3-201ENST00000261407 TUBB4BP68371 445 aa21.26■□□□□ 0.99
LPCAT3-201ENST00000261407 CYP4A11Q02928 519 aa21.26■□□□□ 0.99
LPCAT3-201ENST00000261407 ABCB5Q2M3G0 1257 aa21.26■□□□□ 0.99
LPCAT3-201ENST00000261407 WDR93Q6P2C0 686 aa21.26■□□□□ 0.99
LPCAT3-201ENST00000261407 CREG2Q8IUH2 290 aa21.26■□□□□ 0.99
LPCAT3-201ENST00000261407 BUB1O43683 1085 aa21.25■□□□□ 0.99
LPCAT3-201ENST00000261407 LCA5LO95447 670 aa21.25■□□□□ 0.99
LPCAT3-201ENST00000261407 MYBL2P10244 700 aa21.25■□□□□ 0.99
LPCAT3-201ENST00000261407 ARID5AQ03989 594 aa21.25■□□□□ 0.99
LPCAT3-201ENST00000261407 ENOX2Q16206 610 aaKnown RBP21.25■□□□□ 0.99
LPCAT3-201ENST00000261407 FAM83BQ5T0W9 1011 aa21.25■□□□□ 0.99
LPCAT3-201ENST00000261407 NFRKBQ6P4R8 1299 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms