RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 PLEKP08567 350 aaPredicted RBP6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 ATF7P17544 494 aaPredicted RBP6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 KIAA0319Q5VV43 1072 aa6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 MOV10L1Q9BXT6 1211 aaKnown RBP6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 TRIM9Q9C026 710 aa6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 ASCC2Q9H1I8 757 aaPredicted RBP6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 PROZP22891 400 aa6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 DSG3P32926 999 aa6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 ERVK-24P63145 666 aa6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 GIT2Q14161 759 aa6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 Q4G0T1 1027 aa6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 CAVIN4Q5BKX8 364 aa6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 CASC1Q6TDU7 716 aa6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 TC2NQ8N9U0 490 aa6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 ALG1Q9BT22 464 aa6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 SLC26A6Q9BXS9 759 aa6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 CACNG4Q9UBN1 327 aa6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 BIN2Q9UBW5 565 aaPredicted RBP6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 CNTNAP2Q9UHC6 1331 aa6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 A0A1W2PQ27 194 aa6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 A0A1W2PQ64 194 aa6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 A0A1W2PQD8 194 aa6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 FXR2P51116 673 aaKnown RBP eCLIP6.51□□□□□ -1.373e-6■■■□□ 16.7
TOPBP1-201ENST00000260810 ZSCAN29Q8IWY8 852 aaPredicted RBP6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 PIBF1Q8WXW3 757 aa6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 ZNF830Q96NB3 372 aaPredicted RBP6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 CFHR5Q9BXR6 569 aa6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 PLAC1Q9HBJ0 212 aa6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 RNF19AQ9NV58 838 aa6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 CCDC39Q9UFE4 941 aa6.51□□□□□ -1.37
TOPBP1-201ENST00000260810 HAS3O00219 553 aa6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 HCRTO43612 131 aa6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 RECQL4O94761 1208 aa6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 METAP2P50579 478 aaKnown RBP eCLIP6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 CDC37Q16543 378 aaPredicted RBP6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 C16orf59Q7L2K0 433 aa6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 SCYL3Q8IZE3 742 aa6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 LARGE2Q8N3Y3 721 aa6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 PCDHA4Q9UN74 947 aa6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 TNRC6BQ9UPQ9 1833 aaKnown RBP6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 ZANQ9Y493 2812 aa6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 IFIT3O14879 490 aaKnown RBP6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 PPP6R2O75170 966 aa6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 CYP3A5P20815 502 aa6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 EPHX2P34913 555 aa6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 PRCPP42785 496 aa6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 ANLNQ9NQW6 1124 aa6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 RNF181Q9P0P0 153 aa6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 LRP4O75096 1905 aa6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 PCDH15Q96QU1 1955 aa6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 SNRNP200O75643 2136 aaKnown RBP6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 O00370 1275 aa6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 ADAMTS4O75173 837 aa6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 ZNF202O95125 648 aa6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 CMA1P23946 247 aa6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 CAMK4Q16566 473 aa6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 PDCD2LQ9BRP1 358 aa6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 RC3H2Q9HBD1 1191 aaKnown RBP6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 DUSP10Q9Y6W6 482 aa6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 ANTXRLA6NF34 631 aa6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 GYPCP04921 128 aa6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 LDHDQ86WU2 507 aa6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 TRIB2Q92519 343 aa6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 NSMCE3Q96MG7 304 aa6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 ZNF341Q9BYN7 854 aa6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 CLSTN2Q9H4D0 955 aa6.5□□□□□ -1.37
TOPBP1-201ENST00000260810 LGR5O75473 907 aa6.49□□□□□ -1.37
TOPBP1-201ENST00000260810 ICAM1P05362 532 aa6.49□□□□□ -1.37
TOPBP1-201ENST00000260810 NR1I3Q14994 352 aa6.49□□□□□ -1.37
TOPBP1-201ENST00000260810 CERKLQ49MI3 558 aaPredicted RBP6.49□□□□□ -1.37
TOPBP1-201ENST00000260810 COBLL1Q53SF7 1204 aa6.49□□□□□ -1.37
TOPBP1-201ENST00000260810 CENPPQ6IPU0 288 aa6.49□□□□□ -1.37
TOPBP1-201ENST00000260810 CKAP2LQ8IYA6 745 aa6.49□□□□□ -1.37
TOPBP1-201ENST00000260810 KIAA0319LQ8IZA0 1049 aa6.49□□□□□ -1.37
TOPBP1-201ENST00000260810 TBC1D22AQ8WUA7 517 aa6.49□□□□□ -1.37
TOPBP1-201ENST00000260810 SEMA4DQ92854 862 aa6.49□□□□□ -1.37
TOPBP1-201ENST00000260810 SERTAD1Q9UHV2 236 aa6.49□□□□□ -1.37
TOPBP1-201ENST00000260810 HERC5Q9UII4 1024 aaKnown RBP6.49□□□□□ -1.37
TOPBP1-201ENST00000260810 TRRAPQ9Y4A5 3859 aa6.49□□□□□ -1.37
TOPBP1-201ENST00000260810 POTEB3A0JP26 581 aa6.49□□□□□ -1.37
TOPBP1-201ENST00000260810 BECN2A8MW95 431 aa6.49□□□□□ -1.37
TOPBP1-201ENST00000260810 E9PMD0 336 aa6.49□□□□□ -1.37
TOPBP1-201ENST00000260810 IGSF3O75054 1194 aa6.49□□□□□ -1.37
TOPBP1-201ENST00000260810 ADRB2P07550 413 aa6.49□□□□□ -1.37
TOPBP1-201ENST00000260810 GNAT2P19087 354 aa6.49□□□□□ -1.37
TOPBP1-201ENST00000260810 ZYXQ15942 572 aaKnown RBP6.49□□□□□ -1.37
TOPBP1-201ENST00000260810 PRAMEF19Q5SWL8 479 aa6.49□□□□□ -1.37
TOPBP1-201ENST00000260810 POTEBQ6S5H4 581 aa6.49□□□□□ -1.37
TOPBP1-201ENST00000260810 ARFGAP1Q8N6T3 406 aa6.49□□□□□ -1.37
TOPBP1-201ENST00000260810 CYTH4Q9UIA0 394 aa6.49□□□□□ -1.37
TOPBP1-201ENST00000260810 NEU3Q9UQ49 428 aa6.49□□□□□ -1.37
TOPBP1-201ENST00000260810 CTNND1O60716 968 aaKnown RBP6.49□□□□□ -1.37
TOPBP1-201ENST00000260810 FARP2O94887 1054 aaPredicted RBP6.49□□□□□ -1.37
TOPBP1-201ENST00000260810 CEBPZQ03701 1054 aaKnown RBP6.49□□□□□ -1.37
TOPBP1-201ENST00000260810 PPP2R5CQ13362 524 aa6.49□□□□□ -1.37
TOPBP1-201ENST00000260810 IMMTQ16891 758 aaKnown RBP6.49□□□□□ -1.37
TOPBP1-201ENST00000260810 LLGL2Q6P1M3 1020 aa6.49□□□□□ -1.37
TOPBP1-201ENST00000260810 PIK3AP1Q6ZUJ8 805 aa6.49□□□□□ -1.37
TOPBP1-201ENST00000260810 DDX1Q92499 740 aaKnown RBP6.49□□□□□ -1.37
TOPBP1-201ENST00000260810 MAGEB5Q9BZ81 275 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms