RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 TMED2Q15363 201 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 EPHA10Q5JZY3 1008 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 ANKS6Q68DC2 871 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 PPP4R4Q6NUP7 873 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 ZSCAN1Q8NBB4 408 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 HPS3Q969F9 1004 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 SPATA33Q96N06 139 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 SEZ6LQ9BYH1 1024 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 TMEM206Q9H813 350 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 OLA1Q9NTK5 396 aaKnown RBP4.38□□□□□ -1.71
RNF38-201ENST00000259605 RAB20Q9NX57 234 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 TJP2Q9UDY2 1190 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 PCDHA12Q9UN75 941 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 CFAP99D6REC4 459 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 M0QYT0 321 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 THAP12O43422 761 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 FARP2O94887 1054 aaPredicted RBP4.38□□□□□ -1.71
RNF38-201ENST00000259605 ESRRBO95718 433 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 SFNP31947 248 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 SOX5P35711 763 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 PIK3CAP42336 1068 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 GMPSP49915 693 aaPredicted RBP4.38□□□□□ -1.71
RNF38-201ENST00000259605 ATN1P54259 1190 aaPredicted RBP4.38□□□□□ -1.71
RNF38-201ENST00000259605 IKBKEQ14164 716 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 BTG3Q14201 252 aaPredicted RBP4.38□□□□□ -1.71
RNF38-201ENST00000259605 ARID5BQ14865 1188 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 STX1AQ16623 288 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 SGO2Q562F6 1265 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 ANGEL2Q5VTE6 544 aaKnown RBP4.38□□□□□ -1.71
RNF38-201ENST00000259605 ATL3Q6DD88 541 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 ZC3H14Q6PJT7 736 aaKnown RBP4.38□□□□□ -1.71
RNF38-201ENST00000259605 DEFB132Q7Z7B7 95 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 MORC4Q8TE76 937 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 SCFD2Q8WU76 684 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 HSPH1Q92598 858 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 ZNF496Q96IT1 587 aaPredicted RBP4.38□□□□□ -1.71
RNF38-201ENST00000259605 TEX13BQ9BXU2 312 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 KIAA1586Q9HCI6 787 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 TRPC7Q9HCX4 862 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 KANSL3Q9P2N6 904 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 DDX25Q9UHL0 483 aaKnown RBP4.38□□□□□ -1.71
RNF38-201ENST00000259605 USH1CQ9Y6N9 552 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 CCDC151A5D8V7 595 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 GOLGA8JA6NMD2 632 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 LRRIQ3A6PVS8 624 aaPredicted RBP4.38□□□□□ -1.71
RNF38-201ENST00000259605 SPECC1L-ADORA2AF8WAN1 911 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 GOLGA8MH3BSY2 632 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 ACTN4O43707 911 aaKnown RBP4.38□□□□□ -1.71
RNF38-201ENST00000259605 KRT86O43790 486 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 DPEP1P16444 411 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 PMLP29590 882 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 HNRNPH1P31943 449 aaKnown RBP4.38□□□□□ -1.71
RNF38-201ENST00000259605 CAPZA2P47755 286 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 PTK2Q05397 1052 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 ARHGEF7Q14155 803 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 RCSD1Q6JBY9 416 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 CYB5D1Q6P9G0 228 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 ARHGAP18Q8N392 663 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 RSAD2Q8WXG1 361 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 IL17RAQ96F46 866 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 OTUB1Q96FW1 271 aaPredicted RBP4.38□□□□□ -1.71
RNF38-201ENST00000259605 NLRP4Q96MN2 994 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 SLITRK1Q96PX8 696 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 PANK2Q9BZ23 570 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 JADE2Q9NQC1 790 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 SAE1Q9UBE0 346 aaPredicted RBP4.38□□□□□ -1.71
RNF38-201ENST00000259605 STAP1Q9ULZ2 295 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.38□□□□□ -1.71
RNF38-201ENST00000259605 CDK13Q14004 1512 aaKnown RBP4.38□□□□□ -1.71
RNF38-201ENST00000259605 UGGT2Q9NYU1 1516 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 PSMD14O00487 310 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 SLC9A3R1O14745 358 aaPredicted RBP4.38□□□□□ -1.71
RNF38-201ENST00000259605 TXNP10599 105 aaKnown RBP4.38□□□□□ -1.71
RNF38-201ENST00000259605 PDE1BQ01064 536 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 TEAD4Q15561 434 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 DIXDC1Q155Q3 683 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 DGKDQ16760 1214 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 CCDC144BQ3MJ40 725 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 RGMBQ6NW40 437 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 BARGINQ6ZT62 677 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 FERMT3Q86UX7 667 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 PLEKHM2Q8IWE5 1019 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 SRRM1Q8IYB3 904 aaKnown RBP4.38□□□□□ -1.71
RNF38-201ENST00000259605 ZNF280CQ8ND82 737 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 RNF217Q8TC41 542 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 UBXN4Q92575 508 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 DDX27Q96GQ7 796 aaKnown RBP4.38□□□□□ -1.71
RNF38-201ENST00000259605 AHCYL2Q96HN2 611 aaKnown RBP4.38□□□□□ -1.71
RNF38-201ENST00000259605 ZNF512Q96ME7 567 aaPredicted RBP4.38□□□□□ -1.71
RNF38-201ENST00000259605 RIPOR3Q96MK2 946 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 ACCSQ96QU6 501 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 LLPHQ9BRT6 129 aaKnown RBP4.38□□□□□ -1.71
RNF38-201ENST00000259605 TSGA10Q9BZW7 698 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 MROH8Q9H579 483 aa4.38□□□□□ -1.71
RNF38-201ENST00000259605 K7ERI5 159 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 LSP1P33241 339 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 EPHB3P54753 998 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 ARHGAP4P98171 946 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 MAPRE1Q15691 268 aaKnown RBP4.37□□□□□ -1.71
RNF38-201ENST00000259605 GPR158Q5T848 1215 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms