RNA–Protein interactions for RNA: ENST00000259006.7

LIMD2-201, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 3,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-201ENST00000259006 CWF19L1Q69YN2 538 aaKnown RBP15.31■□□□□ 0.04
LIMD2-201ENST00000259006 RINLQ6ZS11 566 aa15.31■□□□□ 0.04
LIMD2-201ENST00000259006 ALS2CR12Q96Q35 445 aa15.31■□□□□ 0.04
LIMD2-201ENST00000259006 SH2D4AQ9H788 454 aa15.31■□□□□ 0.04
LIMD2-201ENST00000259006 BATF3Q9NR55 127 aa15.31■□□□□ 0.04
LIMD2-201ENST00000259006 MYH7P12883 1935 aa15.31■□□□□ 0.04
LIMD2-201ENST00000259006 TJP1Q07157 1748 aa15.31■□□□□ 0.04
LIMD2-201ENST00000259006 A0A1W2PQC6 194 aa15.3■□□□□ 0.04
LIMD2-201ENST00000259006 TXKP42681 527 aa15.3■□□□□ 0.04
LIMD2-201ENST00000259006 EPHB4P54760 987 aa15.3■□□□□ 0.04
LIMD2-201ENST00000259006 ODF2Q5BJF6 829 aa15.3■□□□□ 0.04
LIMD2-201ENST00000259006 CCDC121Q6ZUS5 278 aa15.3■□□□□ 0.04
LIMD2-201ENST00000259006 ARHGAP22Q7Z5H3 698 aa15.3■□□□□ 0.04
LIMD2-201ENST00000259006 CABP7Q86V35 215 aa15.3■□□□□ 0.04
LIMD2-201ENST00000259006 NOC3LQ8WTT2 800 aaKnown RBP15.3■□□□□ 0.04
LIMD2-201ENST00000259006 TSC22D3Q99576 134 aa15.3■□□□□ 0.04
LIMD2-201ENST00000259006 THAP9Q9H5L6 903 aa15.3■□□□□ 0.04
LIMD2-201ENST00000259006 HYOU1Q9Y4L1 999 aa15.3■□□□□ 0.04
LIMD2-201ENST00000259006 USP17L3A6NCW0 530 aa15.3■□□□□ 0.04
LIMD2-201ENST00000259006 USP17L4A6NCW7 530 aa15.3■□□□□ 0.04
LIMD2-201ENST00000259006 SMIM24O75264 130 aa15.3■□□□□ 0.04
LIMD2-201ENST00000259006 IMPDH2P12268 514 aa15.3■□□□□ 0.04
LIMD2-201ENST00000259006 LONP1P36776 959 aaKnown RBP15.3■□□□□ 0.04
LIMD2-201ENST00000259006 NKX1-1Q15270 411 aaPredicted RBP15.3■□□□□ 0.04
LIMD2-201ENST00000259006 MEA1Q16626 185 aa15.3■□□□□ 0.04
LIMD2-201ENST00000259006 DBN1Q16643 649 aa15.3■□□□□ 0.04
LIMD2-201ENST00000259006 MIIPQ5JXC2 388 aa15.3■□□□□ 0.04
LIMD2-201ENST00000259006 NAA35Q5VZE5 725 aa15.3■□□□□ 0.04
LIMD2-201ENST00000259006 USP17L1Q7RTZ2 530 aa15.3■□□□□ 0.04
LIMD2-201ENST00000259006 GJA10Q969M2 543 aa15.3■□□□□ 0.04
LIMD2-201ENST00000259006 ATRNO75882 1429 aa15.3■□□□□ 0.04
LIMD2-201ENST00000259006 NHSL1Q5SYE7 1610 aa15.3■□□□□ 0.04
LIMD2-201ENST00000259006 MYH6P13533 1939 aa15.3■□□□□ 0.04
LIMD2-201ENST00000259006 RBM47A0AV96 593 aaKnown RBP15.3■□□□□ 0.04
LIMD2-201ENST00000259006 ZNF233A6NK53 670 aa15.3■□□□□ 0.04
LIMD2-201ENST00000259006 CAPN15O75808 1086 aa15.3■□□□□ 0.04
LIMD2-201ENST00000259006 LSP1P33241 339 aa15.3■□□□□ 0.04
LIMD2-201ENST00000259006 LRRC23Q53EV4 343 aaPredicted RBP15.3■□□□□ 0.04
LIMD2-201ENST00000259006 GIMAP8Q8ND71 665 aaPredicted RBP15.3■□□□□ 0.04
LIMD2-201ENST00000259006 FAM81AQ8TBF8 368 aa15.3■□□□□ 0.04
LIMD2-201ENST00000259006 HOOK2Q96ED9 719 aa15.3■□□□□ 0.04
LIMD2-201ENST00000259006 TTYH3Q9C0H2 523 aa15.3■□□□□ 0.04
LIMD2-201ENST00000259006 MMADHCQ9H3L0 296 aaPredicted RBP15.3■□□□□ 0.04
LIMD2-201ENST00000259006 L3MBTL1Q9Y468 752 aa15.3■□□□□ 0.04
LIMD2-201ENST00000259006 ATP6V1G1O75348 118 aa15.29■□□□□ 0.04
LIMD2-201ENST00000259006 SMNDC1O75940 238 aaKnown RBP eCLIP15.29■□□□□ 0.04
LIMD2-201ENST00000259006 USP17L8P0C7I0 530 aa15.29■□□□□ 0.04
LIMD2-201ENST00000259006 TMOD1P28289 359 aa15.29■□□□□ 0.04
LIMD2-201ENST00000259006 TMEM62Q0P6H9 643 aa15.29■□□□□ 0.04
LIMD2-201ENST00000259006 SPRED3Q2MJR0 410 aa15.29■□□□□ 0.04
LIMD2-201ENST00000259006 CCDC50Q8IVM0 306 aa15.29■□□□□ 0.04
LIMD2-201ENST00000259006 BICD1Q96G01 975 aa15.29■□□□□ 0.04
LIMD2-201ENST00000259006 MCM9Q9NXL9 1143 aa15.29■□□□□ 0.04
LIMD2-201ENST00000259006 PHLPP1O60346 1717 aa15.29■□□□□ 0.04
LIMD2-201ENST00000259006 KLRK1P26718 216 aa15.29■□□□□ 0.04
LIMD2-201ENST00000259006 TFAP4Q01664 338 aa15.29■□□□□ 0.04
LIMD2-201ENST00000259006 PFKFB3Q16875 520 aaPredicted RBP15.29■□□□□ 0.04
LIMD2-201ENST00000259006 C4orf32Q8N8J7 132 aa15.29■□□□□ 0.04
LIMD2-201ENST00000259006 NUP58Q9BVL2 599 aa15.29■□□□□ 0.04
LIMD2-201ENST00000259006 TLR10Q9BXR5 811 aa15.29■□□□□ 0.04
LIMD2-201ENST00000259006 TCP11L1Q9NUJ3 509 aa15.29■□□□□ 0.04
LIMD2-201ENST00000259006 SPEF2Q9C093 1822 aa15.29■□□□□ 0.04
LIMD2-201ENST00000259006 ANO9A1A5B4 782 aa15.28■□□□□ 0.04
LIMD2-201ENST00000259006 PALMO75781 387 aa15.28■□□□□ 0.04
LIMD2-201ENST00000259006 CCNE1P24864 410 aa15.28■□□□□ 0.04
LIMD2-201ENST00000259006 CCDC170Q8IYT3 715 aa15.28■□□□□ 0.04
LIMD2-201ENST00000259006 SYCP3Q8IZU3 236 aa15.28■□□□□ 0.04
LIMD2-201ENST00000259006 MMGT1Q8N4V1 131 aa15.28■□□□□ 0.04
LIMD2-201ENST00000259006 SLC44A5Q8NCS7 719 aa15.28■□□□□ 0.04
LIMD2-201ENST00000259006 SEMA6BQ9H3T3 888 aa15.28■□□□□ 0.04
LIMD2-201ENST00000259006 PNPLA7Q6ZV29 1317 aa15.28■□□□□ 0.04
LIMD2-201ENST00000259006 GOLGB1Q14789 3259 aaKnown RBP15.28■□□□□ 0.04
LIMD2-201ENST00000259006 AHCYL1O43865 530 aa15.28■□□□□ 0.04
LIMD2-201ENST00000259006 NR1D1P20393 614 aa15.28■□□□□ 0.04
LIMD2-201ENST00000259006 CACNB1Q02641 598 aaPredicted RBP15.28■□□□□ 0.04
LIMD2-201ENST00000259006 SH3GL2Q99962 352 aa15.28■□□□□ 0.04
LIMD2-201ENST00000259006 RIOK1Q9BRS2 568 aaKnown RBP15.28■□□□□ 0.04
LIMD2-201ENST00000259006 TRIM31Q9BZY9 425 aa15.28■□□□□ 0.04
LIMD2-201ENST00000259006 PHACTR1Q9C0D0 580 aa15.28■□□□□ 0.04
LIMD2-201ENST00000259006 NDST4Q9H3R1 872 aa15.28■□□□□ 0.04
LIMD2-201ENST00000259006 FNBP4Q8N3X1 1017 aaPredicted RBP15.28■□□□□ 0.04
LIMD2-201ENST00000259006 CCDC47Q96A33 483 aaKnown RBP15.28■□□□□ 0.04
LIMD2-201ENST00000259006 FAM163AQ96GL9 167 aaPredicted RBP15.28■□□□□ 0.04
LIMD2-201ENST00000259006 AP1M1Q9BXS5 423 aa15.28■□□□□ 0.04
LIMD2-201ENST00000259006 PACSIN1Q9BY11 444 aa15.28■□□□□ 0.04
LIMD2-201ENST00000259006 TRIM9Q9C026 710 aa15.28■□□□□ 0.04
LIMD2-201ENST00000259006 ZHX3Q9H4I2 956 aa15.28■□□□□ 0.04
LIMD2-201ENST00000259006 FESP07332 822 aa15.27■□□□□ 0.04
LIMD2-201ENST00000259006 KIAA0895Q8NCT3 520 aa15.27■□□□□ 0.04
LIMD2-201ENST00000259006 ZNF473Q8WTR7 871 aaKnown RBP15.27■□□□□ 0.04
LIMD2-201ENST00000259006 SPATA31A5Q5VU36 1347 aa15.27■□□□□ 0.04
LIMD2-201ENST00000259006 SPATA31A7Q8IWB4 1347 aa15.27■□□□□ 0.04
LIMD2-201ENST00000259006 PKD1L3Q7Z443 1732 aa15.27■□□□□ 0.03
LIMD2-201ENST00000259006 RHOBTB3O94955 611 aa15.27■□□□□ 0.03
LIMD2-201ENST00000259006 MFN1Q8IWA4 741 aa15.27■□□□□ 0.03
LIMD2-201ENST00000259006 NELFCDQ8IXH7 590 aa15.27■□□□□ 0.03
LIMD2-201ENST00000259006 ZNF384Q8TF68 577 aa15.27■□□□□ 0.03
LIMD2-201ENST00000259006 CCT8L2Q96SF2 557 aa15.27■□□□□ 0.03
LIMD2-201ENST00000259006 NIP7Q9Y221 180 aaKnown RBP eCLIP15.27■□□□□ 0.03
LIMD2-201ENST00000259006 PLAAQ9Y263 795 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms