RNA–Protein interactions for RNA: ENST00000256552.10

TRPM1-201, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-201ENST00000256552 FAM133AQ8N9E0 248 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 NAF1Q96HR8 494 aaKnown RBP11.06□□□□□ -0.64
TRPM1-201ENST00000256552 PARVBQ9HBI1 364 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 RIC8AQ9NPQ8 531 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 BZW2Q9Y6E2 419 aaKnown RBP11.06□□□□□ -0.64
TRPM1-201ENST00000256552 ACSL3O95573 720 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 IFNB1P01574 187 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 TMOD1P28289 359 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 PPARAQ07869 468 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 MAN2A1Q16706 1144 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 CYP4F22Q6NT55 531 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 DNAJC9Q8WXX5 260 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 LRRC37BQ96QE4 947 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 TMEM60Q9H2L4 133 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 NLRP1Q9C000 1473 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 GOLGA8QA0A0J9YX86 632 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 WDR91A4D1P6 747 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 GOLGA8OA6NCC3 632 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 GOLGA8NF8WBI6 632 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 SERPINB3P29508 390 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 EEF1DP29692 281 aaKnown RBP11.06□□□□□ -0.64
TRPM1-201ENST00000256552 CDC25AP30304 524 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 NR5A1Q13285 461 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 CC2D2BQ6DHV5 1058 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 MAGEC3Q8TD91 643 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 PPP4R1Q8TF05 950 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 TEKT1Q969V4 418 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.06□□□□□ -0.64
TRPM1-201ENST00000256552 CACYBPQ9HB71 228 aaKnown RBP11.06□□□□□ -0.64
TRPM1-201ENST00000256552 ANKIB1Q9P2G1 1089 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 ZFP69BQ9UJL9 534 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 CCT8L1PA6NM43 557 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 CCDC188H7C350 402 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 DKC1O60832 514 aaKnown RBP eCLIP11.06□□□□□ -0.64
TRPM1-201ENST00000256552 FMNL1O95466 1100 aaPredicted RBP11.06□□□□□ -0.64
TRPM1-201ENST00000256552 KRT75O95678 551 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 CASP1P29466 404 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 CALCRLQ16602 461 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 APOA5Q6Q788 366 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 RSRC2Q7L4I2 434 aaKnown RBP11.06□□□□□ -0.64
TRPM1-201ENST00000256552 KRT25Q7Z3Z0 450 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 KIF2BQ8N4N8 673 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 BBOF1Q8ND07 529 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 PDZD8Q8NEN9 1154 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 MAP3K19Q56UN5 1328 aa11.05□□□□□ -0.64
TRPM1-201ENST00000256552 NCKAP5LQ9HCH0 1330 aa11.05□□□□□ -0.64
TRPM1-201ENST00000256552 BZW1Q7L1Q6 419 aaKnown RBP11.05□□□□□ -0.64
TRPM1-201ENST00000256552 SYT2Q8N9I0 419 aaPredicted RBP11.05□□□□□ -0.64
TRPM1-201ENST00000256552 SMCR8Q8TEV9 937 aaPredicted RBP11.05□□□□□ -0.64
TRPM1-201ENST00000256552 CCDC124Q96CT7 223 aaKnown RBP11.05□□□□□ -0.64
TRPM1-201ENST00000256552 MAML3Q96JK9 1138 aa11.05□□□□□ -0.64
TRPM1-201ENST00000256552 PRMT1Q99873 361 aaKnown RBP11.05□□□□□ -0.64
TRPM1-201ENST00000256552 MRPL46Q9H2W6 279 aaKnown RBP11.05□□□□□ -0.64
TRPM1-201ENST00000256552 MKL2Q9ULH7 1088 aa11.05□□□□□ -0.64
TRPM1-201ENST00000256552 PCDHB13Q9Y5F0 798 aa11.05□□□□□ -0.64
TRPM1-201ENST00000256552 TTC26A0AVF1 554 aa11.05□□□□□ -0.64
TRPM1-201ENST00000256552 MMP1P03956 469 aa11.05□□□□□ -0.64
TRPM1-201ENST00000256552 SERPING1P05155 500 aa11.05□□□□□ -0.64
TRPM1-201ENST00000256552 PYGLP06737 847 aa11.05□□□□□ -0.64
TRPM1-201ENST00000256552 TECP42680 631 aa11.05□□□□□ -0.64
TRPM1-201ENST00000256552 CATSPER2Q96P56 530 aa11.05□□□□□ -0.64
TRPM1-201ENST00000256552 IMPG2Q9BZV3 1241 aa11.05□□□□□ -0.64
TRPM1-201ENST00000256552 DKK3Q9UBP4 350 aa11.05□□□□□ -0.64
TRPM1-201ENST00000256552 TRIM10Q9UDY6 481 aa11.05□□□□□ -0.64
TRPM1-201ENST00000256552 SNX24Q9Y343 169 aa11.05□□□□□ -0.64
TRPM1-201ENST00000256552 KDRP35968 1356 aa11.05□□□□□ -0.64
TRPM1-201ENST00000256552 ATXN2Q99700 1313 aaKnown RBP11.05□□□□□ -0.64
TRPM1-201ENST00000256552 DNAJC6O75061 913 aa11.05□□□□□ -0.64
TRPM1-201ENST00000256552 LDHCP07864 332 aa11.05□□□□□ -0.64
TRPM1-201ENST00000256552 SCTRP47872 440 aa11.05□□□□□ -0.64
TRPM1-201ENST00000256552 CDR2Q01850 454 aa11.05□□□□□ -0.64
TRPM1-201ENST00000256552 CCDC89Q8N998 374 aa11.05□□□□□ -0.64
TRPM1-201ENST00000256552 TTLL11Q8NHH1 800 aa11.05□□□□□ -0.64
TRPM1-201ENST00000256552 ARMCX3Q9UH62 379 aaPredicted RBP11.05□□□□□ -0.64
TRPM1-201ENST00000256552 DDX20Q9UHI6 824 aaKnown RBP11.05□□□□□ -0.64
TRPM1-201ENST00000256552 C2CD2Q9Y426 696 aa11.05□□□□□ -0.64
TRPM1-201ENST00000256552 CCDC189A1A4V9 331 aa11.05□□□□□ -0.64
TRPM1-201ENST00000256552 LGALS16A8MUM7 142 aa11.05□□□□□ -0.64
TRPM1-201ENST00000256552 FOXN1O15353 648 aa11.05□□□□□ -0.64
TRPM1-201ENST00000256552 RNMTO43148 476 aaKnown RBP11.05□□□□□ -0.64
TRPM1-201ENST00000256552 FGGP02679 453 aa11.05□□□□□ -0.64
TRPM1-201ENST00000256552 PMS2P54278 862 aa11.05□□□□□ -0.64
TRPM1-201ENST00000256552 MYCBPAPQ8TBZ2 947 aa11.05□□□□□ -0.64
TRPM1-201ENST00000256552 TGS1Q96RS0 853 aaKnown RBP11.05□□□□□ -0.64
TRPM1-201ENST00000256552 ATXN10Q9UBB4 475 aa11.05□□□□□ -0.64
TRPM1-201ENST00000256552 DBNLQ9UJU6 430 aaKnown RBP11.05□□□□□ -0.64
TRPM1-201ENST00000256552 LSM1O15116 133 aaKnown RBP11.04□□□□□ -0.64
TRPM1-201ENST00000256552 PDE5AO76074 875 aa11.04□□□□□ -0.64
TRPM1-201ENST00000256552 RAB27AP51159 221 aa11.04□□□□□ -0.64
TRPM1-201ENST00000256552 TRPM8Q7Z2W7 1104 aa11.04□□□□□ -0.64
TRPM1-201ENST00000256552 FUKQ8N0W3 1084 aa11.04□□□□□ -0.64
TRPM1-201ENST00000256552 ANKZF1Q9H8Y5 726 aa11.04□□□□□ -0.64
TRPM1-201ENST00000256552 IFT122Q9HBG6 1241 aa11.04□□□□□ -0.64
TRPM1-201ENST00000256552 SNX12Q9UMY4 172 aa11.04□□□□□ -0.64
TRPM1-201ENST00000256552 WDR62O43379 1518 aa11.04□□□□□ -0.64
TRPM1-201ENST00000256552 ERVK-7P63135 1459 aa11.04□□□□□ -0.64
TRPM1-201ENST00000256552 A0A0G2JND7 137 aa11.04□□□□□ -0.64
TRPM1-201ENST00000256552 TTC4O95801 387 aa11.04□□□□□ -0.64
TRPM1-201ENST00000256552 ZMYM1Q5SVZ6 1142 aa11.04□□□□□ -0.64
TRPM1-201ENST00000256552 BLIDQ8IZY5 108 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms