RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 GUCY2DQ02846 1103 aa13.9□□□□□ -0.18
RAB3IP-201ENST00000247833 NFIAQ12857 509 aa13.9□□□□□ -0.18
RAB3IP-201ENST00000247833 SLFN13Q68D06 897 aa13.9□□□□□ -0.18
RAB3IP-201ENST00000247833 TEKT1Q969V4 418 aa13.9□□□□□ -0.18
RAB3IP-201ENST00000247833 NT5C3AQ9H0P0 336 aa13.9□□□□□ -0.18
RAB3IP-201ENST00000247833 RIC8AQ9NPQ8 531 aa13.9□□□□□ -0.18
RAB3IP-201ENST00000247833 PPEF1O14829 653 aaPredicted RBP13.89□□□□□ -0.19
RAB3IP-201ENST00000247833 PALMO75781 387 aa13.89□□□□□ -0.19
RAB3IP-201ENST00000247833 BBOX1O75936 387 aa13.89□□□□□ -0.19
RAB3IP-201ENST00000247833 ATP1A2P50993 1020 aa13.89□□□□□ -0.19
RAB3IP-201ENST00000247833 UBXN2AP68543 259 aa13.89□□□□□ -0.19
RAB3IP-201ENST00000247833 ECM1Q16610 540 aa13.89□□□□□ -0.19
RAB3IP-201ENST00000247833 QRICH1Q2TAL8 776 aa13.89□□□□□ -0.19
RAB3IP-201ENST00000247833 CFAP221Q4G0U5 840 aa13.89□□□□□ -0.19
RAB3IP-201ENST00000247833 KRT12Q99456 494 aa13.89□□□□□ -0.19
RAB3IP-201ENST00000247833 HPCAL4Q9UM19 191 aa13.89□□□□□ -0.19
RAB3IP-201ENST00000247833 ZBTB5O15062 677 aa13.89□□□□□ -0.19
RAB3IP-201ENST00000247833 PRPF6O94906 941 aaKnown RBP13.89□□□□□ -0.19
RAB3IP-201ENST00000247833 GCNT3O95395 438 aa13.89□□□□□ -0.19
RAB3IP-201ENST00000247833 ACTN1P12814 892 aa13.89□□□□□ -0.19
RAB3IP-201ENST00000247833 RIOX1Q9H6W3 641 aa13.89□□□□□ -0.19
RAB3IP-201ENST00000247833 PKD2L1Q9P0L9 805 aa13.89□□□□□ -0.19
RAB3IP-201ENST00000247833 ZYXQ15942 572 aaKnown RBP13.89□□□□□ -0.19
RAB3IP-201ENST00000247833 SHROOM1Q2M3G4 852 aaPredicted RBP13.89□□□□□ -0.19
RAB3IP-201ENST00000247833 WDR93Q6P2C0 686 aa13.89□□□□□ -0.19
RAB3IP-201ENST00000247833 PDXDC1Q6P996 788 aa13.89□□□□□ -0.19
RAB3IP-201ENST00000247833 SLC30A10Q6XR72 485 aa13.89□□□□□ -0.19
RAB3IP-201ENST00000247833 CCNI2Q6ZMN8 369 aaPredicted RBP13.89□□□□□ -0.19
RAB3IP-201ENST00000247833 PROCA1Q8NCQ7 364 aaPredicted RBP13.89□□□□□ -0.19
RAB3IP-201ENST00000247833 ERMNQ8TAM6 284 aa13.89□□□□□ -0.19
RAB3IP-201ENST00000247833 FGFBP2Q9BYJ0 223 aa13.89□□□□□ -0.19
RAB3IP-201ENST00000247833 ANO3Q9BYT9 981 aa13.89□□□□□ -0.19
RAB3IP-201ENST00000247833 TTYH3Q9C0H2 523 aa13.89□□□□□ -0.19
RAB3IP-201ENST00000247833 BCCIPQ9P287 314 aaKnown RBP eCLIP13.89□□□□□ -0.19
RAB3IP-201ENST00000247833 RRP15Q9Y3B9 282 aaKnown RBP13.89□□□□□ -0.19
RAB3IP-201ENST00000247833 DOCK2Q92608 1830 aa13.89□□□□□ -0.19
RAB3IP-201ENST00000247833 KCNK3O14649 394 aa13.88□□□□□ -0.19
RAB3IP-201ENST00000247833 FXR2P51116 673 aaKnown RBP eCLIP13.88□□□□□ -0.19
RAB3IP-201ENST00000247833 GPATCH4Q5T3I0 446 aaKnown RBP13.88□□□□□ -0.19
RAB3IP-201ENST00000247833 MTMR8Q96EF0 704 aa13.88□□□□□ -0.19
RAB3IP-201ENST00000247833 MTMR9Q96QG7 549 aa13.88□□□□□ -0.19
RAB3IP-201ENST00000247833 EPB41L5Q9HCM4 733 aa13.88□□□□□ -0.19
RAB3IP-201ENST00000247833 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.88□□□□□ -0.19
RAB3IP-201ENST00000247833 DNM3Q9UQ16 869 aa13.88□□□□□ -0.19
RAB3IP-201ENST00000247833 CEP104O60308 925 aa13.88□□□□□ -0.19
RAB3IP-201ENST00000247833 CDC37Q16543 378 aaPredicted RBP13.88□□□□□ -0.19
RAB3IP-201ENST00000247833 CERKLQ49MI3 558 aaPredicted RBP13.88□□□□□ -0.19
RAB3IP-201ENST00000247833 MSL1Q68DK7 614 aa13.88□□□□□ -0.19
RAB3IP-201ENST00000247833 MAEAQ7L5Y9 396 aa13.88□□□□□ -0.19
RAB3IP-201ENST00000247833 RBM12Q9NTZ6 932 aaKnown RBP13.88□□□□□ -0.19
RAB3IP-201ENST00000247833 ARMCX3Q9UH62 379 aaPredicted RBP13.88□□□□□ -0.19
RAB3IP-201ENST00000247833 SIK3Q9Y2K2 1263 aa13.88□□□□□ -0.19
RAB3IP-201ENST00000247833 HEXIM1O94992 359 aaKnown RBP13.88□□□□□ -0.19
RAB3IP-201ENST00000247833 CFAP58Q5T655 872 aa13.88□□□□□ -0.19
RAB3IP-201ENST00000247833 FAM184BQ9ULE4 1060 aa13.88□□□□□ -0.19
RAB3IP-201ENST00000247833 NFU1Q9UMS0 254 aa13.88□□□□□ -0.19
RAB3IP-201ENST00000247833 KDM3AQ9Y4C1 1321 aa13.87□□□□□ -0.19
RAB3IP-201ENST00000247833 MYO1CO00159 1063 aa13.87□□□□□ -0.19
RAB3IP-201ENST00000247833 VPS72Q15906 364 aa13.87□□□□□ -0.19
RAB3IP-201ENST00000247833 RDH13Q8NBN7 331 aa13.87□□□□□ -0.19
RAB3IP-201ENST00000247833 LCMT1Q9UIC8 334 aa13.87□□□□□ -0.19
RAB3IP-201ENST00000247833 ABCA3Q99758 1704 aa13.87□□□□□ -0.19
RAB3IP-201ENST00000247833 CFBP00751 764 aa13.87□□□□□ -0.19
RAB3IP-201ENST00000247833 EEF2P13639 858 aaKnown RBP13.87□□□□□ -0.19
RAB3IP-201ENST00000247833 ICA1Q05084 483 aa13.87□□□□□ -0.19
RAB3IP-201ENST00000247833 KCNH2Q12809 1159 aa13.87□□□□□ -0.19
RAB3IP-201ENST00000247833 PDIA5Q14554 519 aa13.87□□□□□ -0.19
RAB3IP-201ENST00000247833 SEPT2Q15019 361 aa13.87□□□□□ -0.19
RAB3IP-201ENST00000247833 HAUS3Q68CZ6 603 aa13.87□□□□□ -0.19
RAB3IP-201ENST00000247833 RASSF4Q9H2L5 321 aa13.87□□□□□ -0.19
RAB3IP-201ENST00000247833 MYH10P35580 1976 aa13.87□□□□□ -0.19
RAB3IP-201ENST00000247833 ESYT2A0FGR8 921 aa13.87□□□□□ -0.19
RAB3IP-201ENST00000247833 SFR1Q86XK3 245 aa13.87□□□□□ -0.19
RAB3IP-201ENST00000247833 PACSIN1Q9BY11 444 aa13.87□□□□□ -0.19
RAB3IP-201ENST00000247833 UBXN6Q9BZV1 441 aa13.87□□□□□ -0.19
RAB3IP-201ENST00000247833 LRRC4BQ9NT99 713 aa13.87□□□□□ -0.19
RAB3IP-201ENST00000247833 STIM2Q9P246 746 aa13.87□□□□□ -0.19
RAB3IP-201ENST00000247833 BCORQ6W2J9 1755 aa13.87□□□□□ -0.19
RAB3IP-201ENST00000247833 DDX60Q8IY21 1712 aaKnown RBP13.87□□□□□ -0.19
RAB3IP-201ENST00000247833 A0A1W2PQJ5 194 aa13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 ZSCAN5CA6NGD5 496 aaPredicted RBP13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 hCG_1984214I3L0E3 225 aa13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 GYS1P13807 737 aa13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 TPH2Q8IWU9 490 aa13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 ZFPM1Q8IX07 1006 aa13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 ZNF713Q8N859 430 aaPredicted RBP13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 PIGOQ8TEQ8 1089 aa13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 IQCDQ96DY2 449 aa13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 BHMT2Q9H2M3 363 aa13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 SALL4Q9UJQ4 1053 aa13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 PPP1R11O60927 126 aaPredicted RBP13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 TRIM37O94972 964 aa13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 SERPING1P05155 500 aa13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 XRCC5P13010 732 aaKnown RBP13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 KLRC1P26715 233 aa13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 PSMD2Q13200 908 aa13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 CREG2Q8IUH2 290 aa13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 HAS1Q92839 578 aa13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 CCDC43Q96MW1 224 aaKnown RBP13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 TRIM31Q9BZY9 425 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms