RNA–Protein interactions for RNA: ENST00000228307.11

PXN-201, Transcript of paxillin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PXN, Length 3,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-201ENST00000228307 BRIP1Q9BX63 1249 aa17.25■□□□□ 0.35
PXN-201ENST00000228307 STRCQ7RTU9 1775 aa17.25■□□□□ 0.35
PXN-201ENST00000228307 COL18A1P39060 1754 aa17.25■□□□□ 0.35
PXN-201ENST00000228307 ZSCAN5CA6NGD5 496 aaPredicted RBP17.25■□□□□ 0.35
PXN-201ENST00000228307 CLTAP09496 248 aa17.25■□□□□ 0.35
PXN-201ENST00000228307 PLCG2P16885 1265 aa17.25■□□□□ 0.35
PXN-201ENST00000228307 CTNNBL1Q8WYA6 563 aaPredicted RBP17.25■□□□□ 0.35
PXN-201ENST00000228307 CTDP1Q9Y5B0 961 aaPredicted RBP17.25■□□□□ 0.35
PXN-201ENST00000228307 UTRNP46939 3433 aa17.25■□□□□ 0.35
PXN-201ENST00000228307 RCCD1A6NED2 376 aa17.25■□□□□ 0.35
PXN-201ENST00000228307 KCTD19Q17RG1 926 aaPredicted RBP17.25■□□□□ 0.35
PXN-201ENST00000228307 PAPD7Q5XG87 772 aaKnown RBP17.25■□□□□ 0.35
PXN-201ENST00000228307 LARP4BQ92615 738 aaKnown RBP17.25■□□□□ 0.35
PXN-201ENST00000228307 TDRD3Q9H7E2 651 aaKnown RBP17.25■□□□□ 0.35
PXN-201ENST00000228307 PKD2L1Q9P0L9 805 aa17.25■□□□□ 0.35
PXN-201ENST00000228307 UTP11Q9Y3A2 253 aaKnown RBP17.25■□□□□ 0.35
PXN-201ENST00000228307 GSTTP1A0A1W2PQM5 241 aa17.24■□□□□ 0.35
PXN-201ENST00000228307 ALDH1B1P30837 517 aa17.24■□□□□ 0.35
PXN-201ENST00000228307 IFNAR2P48551 515 aa17.24■□□□□ 0.35
PXN-201ENST00000228307 TROAPQ12815 778 aa17.24■□□□□ 0.35
PXN-201ENST00000228307 CCDC65Q8IXS2 484 aa17.24■□□□□ 0.35
PXN-201ENST00000228307 OGFOD1Q8N543 542 aa17.24■□□□□ 0.35
PXN-201ENST00000228307 CCDC155Q8N6L0 562 aa17.24■□□□□ 0.35
PXN-201ENST00000228307 OR2W6PQ8NHA6 318 aa17.24■□□□□ 0.35
PXN-201ENST00000228307 SAMD15Q9P1V8 674 aa17.24■□□□□ 0.35
PXN-201ENST00000228307 REXO2Q9Y3B8 237 aaKnown RBP17.24■□□□□ 0.35
PXN-201ENST00000228307 GKAP1Q5VSY0 366 aaPredicted RBP17.24■□□□□ 0.35
PXN-201ENST00000228307 MIGA2Q7L4E1 593 aa17.24■□□□□ 0.35
PXN-201ENST00000228307 LMBR1Q8WVP7 490 aa17.24■□□□□ 0.35
PXN-201ENST00000228307 PAIP2Q9BPZ3 127 aaKnown RBP17.24■□□□□ 0.35
PXN-201ENST00000228307 USP17L5A8MUK1 530 aa17.24■□□□□ 0.35
PXN-201ENST00000228307 PDE6BP35913 854 aa17.24■□□□□ 0.35
PXN-201ENST00000228307 LLGL1Q15334 1064 aa17.24■□□□□ 0.35
PXN-201ENST00000228307 MGARPQ8TDB4 240 aa17.24■□□□□ 0.35
PXN-201ENST00000228307 GOLPH3Q9H4A6 298 aa17.24■□□□□ 0.35
PXN-201ENST00000228307 ODF2LQ9ULJ1 636 aa17.24■□□□□ 0.35
PXN-201ENST00000228307 ATP8A1Q9Y2Q0 1164 aa17.24■□□□□ 0.35
PXN-201ENST00000228307 GJA3Q9Y6H8 435 aa17.24■□□□□ 0.35
PXN-201ENST00000228307 ARFGEF2Q9Y6D5 1785 aa17.23■□□□□ 0.35
PXN-201ENST00000228307 MEFVO15553 781 aaPredicted RBP17.23■□□□□ 0.35
PXN-201ENST00000228307 BUB1BO60566 1050 aaPredicted RBP17.23■□□□□ 0.35
PXN-201ENST00000228307 SLC10A5Q5PT55 438 aa17.23■□□□□ 0.35
PXN-201ENST00000228307 PDXDC2PQ6P474 469 aa17.23■□□□□ 0.35
PXN-201ENST00000228307 DNAJC7Q99615 494 aa17.23■□□□□ 0.35
PXN-201ENST00000228307 TRIM9Q9C026 710 aa17.23■□□□□ 0.35
PXN-201ENST00000228307 FAM26FQ5R3K3 315 aa17.23■□□□□ 0.35
PXN-201ENST00000228307 TCP11Q8WWU5 503 aa17.23■□□□□ 0.35
PXN-201ENST00000228307 RNPC3Q96LT9 517 aaKnown RBP17.23■□□□□ 0.35
PXN-201ENST00000228307 KCNK9Q9NPC2 374 aa17.23■□□□□ 0.35
PXN-201ENST00000228307 ZBTB12Q9Y330 459 aaPredicted RBP17.23■□□□□ 0.35
PXN-201ENST00000228307 LSP1P33241 339 aa17.23■□□□□ 0.35
PXN-201ENST00000228307 SSR1P43307 286 aaKnown RBP17.23■□□□□ 0.35
PXN-201ENST00000228307 AMPD2Q01433 879 aa17.23■□□□□ 0.35
PXN-201ENST00000228307 U2AF1L4Q8WU68 220 aaKnown RBP17.23■□□□□ 0.35
PXN-201ENST00000228307 TACO1Q9BSH4 297 aaKnown RBP17.23■□□□□ 0.35
PXN-201ENST00000228307 SH2D4AQ9H788 454 aa17.23■□□□□ 0.35
PXN-201ENST00000228307 POTEMA6NI47 508 aa17.22■□□□□ 0.35
PXN-201ENST00000228307 PPP1R37O75864 691 aa17.22■□□□□ 0.35
PXN-201ENST00000228307 C12orf60Q5U649 245 aa17.22■□□□□ 0.35
PXN-201ENST00000228307 KSR1Q8IVT5 923 aa17.22■□□□□ 0.35
PXN-201ENST00000228307 UBXN6Q9BZV1 441 aa17.22■□□□□ 0.35
PXN-201ENST00000228307 DDX47Q9H0S4 455 aaKnown RBP17.22■□□□□ 0.35
PXN-201ENST00000228307 PCDHB13Q9Y5F0 798 aa17.22■□□□□ 0.35
PXN-201ENST00000228307 PARP4Q9UKK3 1724 aaKnown RBP17.22■□□□□ 0.35
PXN-201ENST00000228307 BCL9LQ86UU0 1499 aa17.22■□□□□ 0.35
PXN-201ENST00000228307 PBX1P40424 430 aa17.22■□□□□ 0.35
PXN-201ENST00000228307 NFIAQ12857 509 aa17.22■□□□□ 0.35
PXN-201ENST00000228307 SPATS2Q86XZ4 545 aaKnown RBP17.22■□□□□ 0.35
PXN-201ENST00000228307 CCT8L2Q96SF2 557 aa17.22■□□□□ 0.35
PXN-201ENST00000228307 PDS5AQ29RF7 1337 aaKnown RBP17.22■□□□□ 0.35
PXN-201ENST00000228307 TBCAO75347 108 aaKnown RBP17.22■□□□□ 0.35
PXN-201ENST00000228307 DHX9Q08211 1270 aaKnown RBP17.22■□□□□ 0.35
PXN-201ENST00000228307 ADAM9Q13443 819 aa17.22■□□□□ 0.35
PXN-201ENST00000228307 SH3RF1Q7Z6J0 888 aa17.22■□□□□ 0.35
PXN-201ENST00000228307 NLRP14Q86W24 1093 aa17.22■□□□□ 0.35
PXN-201ENST00000228307 TBC1D22AQ8WUA7 517 aa17.22■□□□□ 0.35
PXN-201ENST00000228307 GJA10Q969M2 543 aa17.22■□□□□ 0.35
PXN-201ENST00000228307 KIF4AO95239 1232 aa17.21■□□□□ 0.35
PXN-201ENST00000228307 FKBP3Q00688 224 aaKnown RBP17.21■□□□□ 0.35
PXN-201ENST00000228307 UBE2SQ16763 222 aa17.21■□□□□ 0.35
PXN-201ENST00000228307 WDR59Q6PJI9 974 aa17.21■□□□□ 0.35
PXN-201ENST00000228307 DDX42Q86XP3 938 aaKnown RBP eCLIP17.21■□□□□ 0.35
PXN-201ENST00000228307 N4BP2L2Q92802 583 aaPredicted RBP17.21■□□□□ 0.35
PXN-201ENST00000228307 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.21■□□□□ 0.352e-6■■■■■ 98.3
PXN-201ENST00000228307 PANK4Q9NVE7 773 aa17.21■□□□□ 0.35
PXN-201ENST00000228307 SERPINB13Q9UIV8 391 aa17.21■□□□□ 0.35
PXN-201ENST00000228307 CTNND1O60716 968 aaKnown RBP17.21■□□□□ 0.35
PXN-201ENST00000228307 NEFHP12036 1026 aa17.21■□□□□ 0.35
PXN-201ENST00000228307 AKR1B1P15121 316 aa17.21■□□□□ 0.35
PXN-201ENST00000228307 RCAN1P53805 252 aa17.21■□□□□ 0.35
PXN-201ENST00000228307 PLS1Q14651 629 aa17.21■□□□□ 0.35
PXN-201ENST00000228307 SNCBQ16143 134 aa17.21■□□□□ 0.35
PXN-201ENST00000228307 GIMAP8Q8ND71 665 aaPredicted RBP17.21■□□□□ 0.35
PXN-201ENST00000228307 BANK1Q8NDB2 785 aa17.21■□□□□ 0.35
PXN-201ENST00000228307 PDGFDQ9GZP0 370 aaPredicted RBP17.21■□□□□ 0.35
PXN-201ENST00000228307 DAGLAQ9Y4D2 1042 aa17.21■□□□□ 0.35
PXN-201ENST00000228307 A0A1B0GUA9 196 aa17.2■□□□□ 0.34
PXN-201ENST00000228307 LRRC10BA6NIK2 292 aa17.2■□□□□ 0.34
PXN-201ENST00000228307 TM4SF1P30408 202 aa17.2■□□□□ 0.34
PXN-201ENST00000228307 HIBCHQ6NVY1 386 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms