RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 CD2APQ9Y5K6 639 aa17.59■□□□□ 0.41
SF3A2-201ENST00000221494 CAPN6Q9Y6Q1 641 aa17.59■□□□□ 0.41
SF3A2-201ENST00000221494 ATAD5Q96QE3 1844 aa17.59■□□□□ 0.41
SF3A2-201ENST00000221494 hCG_1642624A0A1W2PR95 340 aa17.58■□□□□ 0.4
SF3A2-201ENST00000221494 CES2O00748 559 aa17.58■□□□□ 0.4
SF3A2-201ENST00000221494 NDUFAB1O14561 156 aa17.58■□□□□ 0.4
SF3A2-201ENST00000221494 MYCNP04198 464 aaPredicted RBP17.58■□□□□ 0.4
SF3A2-201ENST00000221494 LIG3P49916 1009 aa17.58■□□□□ 0.4
SF3A2-201ENST00000221494 MAN2A1Q16706 1144 aa17.58■□□□□ 0.4
SF3A2-201ENST00000221494 TTMPQ5BVD1 217 aa17.58■□□□□ 0.4
SF3A2-201ENST00000221494 DALRD3Q5D0E6 543 aaKnown RBP17.58■□□□□ 0.4
SF3A2-201ENST00000221494 SOGA3Q5TF21 947 aa17.58■□□□□ 0.4
SF3A2-201ENST00000221494 NOX5Q96PH1 765 aa17.58■□□□□ 0.4
SF3A2-201ENST00000221494 TRIM9Q9C026 710 aa17.58■□□□□ 0.4
SF3A2-201ENST00000221494 EPN3Q9H201 632 aa17.58■□□□□ 0.4
SF3A2-201ENST00000221494 ZNF277Q9NRM2 450 aaPredicted RBP17.58■□□□□ 0.4
SF3A2-201ENST00000221494 TCP11L1Q9NUJ3 509 aa17.58■□□□□ 0.4
SF3A2-201ENST00000221494 ARHGAP20Q9P2F6 1191 aa17.58■□□□□ 0.4
SF3A2-201ENST00000221494 FLT1P17948 1338 aa17.57■□□□□ 0.4
SF3A2-201ENST00000221494 HMGB1P1B2RPK0 211 aaPredicted RBP17.57■□□□□ 0.4
SF3A2-201ENST00000221494 CYP27A1Q02318 531 aa17.57■□□□□ 0.4
SF3A2-201ENST00000221494 VWA3BQ502W6 1294 aa17.57■□□□□ 0.4
SF3A2-201ENST00000221494 ANKRD40Q6AI12 368 aa17.57■□□□□ 0.4
SF3A2-201ENST00000221494 CENPPQ6IPU0 288 aa17.57■□□□□ 0.4
SF3A2-201ENST00000221494 APOBEC3HQ6NTF7 200 aaKnown RBP17.57■□□□□ 0.4
SF3A2-201ENST00000221494 KAT2BQ92831 832 aa17.57■□□□□ 0.4
SF3A2-201ENST00000221494 GDAP1L1Q96MZ0 367 aa17.57■□□□□ 0.4
SF3A2-201ENST00000221494 PPP1R1BQ9UD71 204 aaPredicted RBP17.57■□□□□ 0.4
SF3A2-201ENST00000221494 TFR2Q9UP52 801 aa17.57■□□□□ 0.4
SF3A2-201ENST00000221494 DUSP10Q9Y6W6 482 aa17.57■□□□□ 0.4
SF3A2-201ENST00000221494 PDE4DQ08499 809 aa17.57■□□□□ 0.4
SF3A2-201ENST00000221494 CFAP58Q5T655 872 aa17.57■□□□□ 0.4
SF3A2-201ENST00000221494 KIAA0825Q8IV33 1275 aa17.57■□□□□ 0.4
SF3A2-201ENST00000221494 ARFGAP2Q8N6H7 521 aa17.57■□□□□ 0.4
SF3A2-201ENST00000221494 OTUD6BQ8N6M0 293 aa17.57■□□□□ 0.4
SF3A2-201ENST00000221494 TEKT1Q969V4 418 aa17.57■□□□□ 0.4
SF3A2-201ENST00000221494 RRP36Q96EU6 259 aaKnown RBP17.57■□□□□ 0.4
SF3A2-201ENST00000221494 CABS1Q96KC9 395 aa17.57■□□□□ 0.4
SF3A2-201ENST00000221494 VPS33BQ9H267 617 aa17.57■□□□□ 0.4
SF3A2-201ENST00000221494 FNTAP49354 379 aa17.56■□□□□ 0.4
SF3A2-201ENST00000221494 SLC4A8Q2Y0W8 1093 aa17.56■□□□□ 0.4
SF3A2-201ENST00000221494 LRIG3Q6UXM1 1119 aa17.56■□□□□ 0.4
SF3A2-201ENST00000221494 DGKHQ86XP1 1220 aa17.56■□□□□ 0.4
SF3A2-201ENST00000221494 TSEN2Q8NCE0 465 aaKnown RBP17.56■□□□□ 0.4
SF3A2-201ENST00000221494 PVALEFA0A1B0GWK0 134 aa17.55■□□□□ 0.4
SF3A2-201ENST00000221494 ANKRD65E5RJM6 399 aa17.55■□□□□ 0.4
SF3A2-201ENST00000221494 AKR1B10O60218 316 aa17.55■□□□□ 0.4
SF3A2-201ENST00000221494 EIF4A3P38919 411 aaKnown RBP17.55■□□□□ 0.4
SF3A2-201ENST00000221494 MAGEA1P43355 309 aa17.55■□□□□ 0.4
SF3A2-201ENST00000221494 CRKP46108 304 aa17.55■□□□□ 0.4
SF3A2-201ENST00000221494 HDLBPQ00341 1268 aaKnown RBP17.55■□□□□ 0.4
SF3A2-201ENST00000221494 LRRC63Q05C16 580 aa17.55■□□□□ 0.4
SF3A2-201ENST00000221494 ASTE1Q2TB18 679 aaPredicted RBP17.55■□□□□ 0.4
SF3A2-201ENST00000221494 CABP7Q86V35 215 aa17.55■□□□□ 0.4
SF3A2-201ENST00000221494 LARGE2Q8N3Y3 721 aa17.55■□□□□ 0.4
SF3A2-201ENST00000221494 HDAC7Q8WUI4 952 aa17.55■□□□□ 0.4
SF3A2-201ENST00000221494 ZDHHC15Q96MV8 337 aa17.55■□□□□ 0.4
SF3A2-201ENST00000221494 ZIM3Q96PE6 472 aa17.55■□□□□ 0.4
SF3A2-201ENST00000221494 LZTS2Q9BRK4 669 aa17.55■□□□□ 0.4
SF3A2-201ENST00000221494 SAP30BPQ9UHR5 308 aaKnown RBP17.55■□□□□ 0.4
SF3A2-201ENST00000221494 MOCS3O95396 460 aa17.55■□□□□ 0.4
SF3A2-201ENST00000221494 PPP4R3AQ6IN85 833 aa17.55■□□□□ 0.4
SF3A2-201ENST00000221494 ARL8AQ96BM9 186 aa17.55■□□□□ 0.4
SF3A2-201ENST00000221494 DYNLL2Q96FJ2 89 aa17.55■□□□□ 0.4
SF3A2-201ENST00000221494 TLR10Q9BXR5 811 aa17.55■□□□□ 0.4
SF3A2-201ENST00000221494 NDST4Q9H3R1 872 aa17.55■□□□□ 0.4
SF3A2-201ENST00000221494 STK17AQ9UEE5 414 aa17.55■□□□□ 0.4
SF3A2-201ENST00000221494 ROBO3Q96MS0 1386 aa17.55■□□□□ 0.4
SF3A2-201ENST00000221494 LSP1P33241 339 aa17.54■□□□□ 0.4
SF3A2-201ENST00000221494 NAP1L1P55209 391 aaKnown RBP17.54■□□□□ 0.4
SF3A2-201ENST00000221494 GRM4Q14833 912 aa17.54■□□□□ 0.4
SF3A2-201ENST00000221494 TYW1BQ6NUM6 668 aa17.54■□□□□ 0.4
SF3A2-201ENST00000221494 CDC42EP5Q6NZY7 148 aa17.54■□□□□ 0.4
SF3A2-201ENST00000221494 CEP120Q8N960 986 aa17.54■□□□□ 0.4
SF3A2-201ENST00000221494 MLXIPQ9HAP2 919 aa17.54■□□□□ 0.4
SF3A2-201ENST00000221494 USP40Q9NVE5 1235 aa17.54■□□□□ 0.4
SF3A2-201ENST00000221494 PCDHA6Q9UN73 950 aa17.54■□□□□ 0.4
SF3A2-201ENST00000221494 PCDHA8Q9Y5H6 950 aa17.54■□□□□ 0.4
SF3A2-201ENST00000221494 PPP1R37O75864 691 aa17.53■□□□□ 0.4
SF3A2-201ENST00000221494 OR52Z1P0C646 297 aa17.53■□□□□ 0.4
SF3A2-201ENST00000221494 PLCG1P19174 1290 aa17.53■□□□□ 0.4
SF3A2-201ENST00000221494 KLK7P49862 253 aa17.53■□□□□ 0.4
SF3A2-201ENST00000221494 ASIC1P78348 528 aa17.53■□□□□ 0.4
SF3A2-201ENST00000221494 NFRKBQ6P4R8 1299 aa17.53■□□□□ 0.4
SF3A2-201ENST00000221494 PDXDC1Q6P996 788 aa17.53■□□□□ 0.4
SF3A2-201ENST00000221494 KCNV1Q6PIU1 500 aa17.53■□□□□ 0.4
SF3A2-201ENST00000221494 KRT25Q7Z3Z0 450 aa17.53■□□□□ 0.4
SF3A2-201ENST00000221494 TAX1BP1Q86VP1 789 aa17.53■□□□□ 0.4
SF3A2-201ENST00000221494 GUF1Q8N442 669 aaKnown RBP17.53■□□□□ 0.4
SF3A2-201ENST00000221494 LRRC27Q9C0I9 530 aa17.53■□□□□ 0.4
SF3A2-201ENST00000221494 ATP8B3O60423 1300 aa17.53■□□□□ 0.4
SF3A2-201ENST00000221494 SCN9AQ15858 1988 aa17.53■□□□□ 0.4
SF3A2-201ENST00000221494 COL4A5P29400 1685 aa17.53■□□□□ 0.4
SF3A2-201ENST00000221494 NR1D1P20393 614 aa17.53■□□□□ 0.4
SF3A2-201ENST00000221494 PTGISQ16647 500 aa17.53■□□□□ 0.4
SF3A2-201ENST00000221494 KLHDC7AQ5VTJ3 777 aa17.53■□□□□ 0.4
SF3A2-201ENST00000221494 KRT26Q7Z3Y9 468 aa17.53■□□□□ 0.4
SF3A2-201ENST00000221494 BAP1Q92560 729 aa17.53■□□□□ 0.4
SF3A2-201ENST00000221494 ATP6V1G3Q96LB4 118 aa17.53■□□□□ 0.4
SF3A2-201ENST00000221494 TMEM60Q9H2L4 133 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 275.3 ms