RNA–Protein interactions for RNA: ENST00000220478.7

SCG3-201, Transcript of secretogranin III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG3, Length 3,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-201ENST00000220478 PCDHGC5Q9Y5F6 944 aa8.7□□□□□ -1.02
SCG3-201ENST00000220478 LRP5O75197 1615 aa8.7□□□□□ -1.02
SCG3-201ENST00000220478 DUOX1Q9NRD9 1551 aa8.7□□□□□ -1.02
SCG3-201ENST00000220478 PRDM1O75626 825 aa8.7□□□□□ -1.02
SCG3-201ENST00000220478 DEXIO95424 95 aa8.7□□□□□ -1.02
SCG3-201ENST00000220478 PECAM1P16284 738 aaPredicted RBP8.7□□□□□ -1.02
SCG3-201ENST00000220478 ITGA6P23229 1130 aa8.7□□□□□ -1.02
SCG3-201ENST00000220478 GCKP35557 465 aa8.7□□□□□ -1.02
SCG3-201ENST00000220478 CCNG1P51959 295 aa8.7□□□□□ -1.02
SCG3-201ENST00000220478 KIF11P52732 1056 aa8.7□□□□□ -1.02
SCG3-201ENST00000220478 KCNJ2P63252 427 aa8.7□□□□□ -1.02
SCG3-201ENST00000220478 KIF5AQ12840 1032 aa8.7□□□□□ -1.02
SCG3-201ENST00000220478 BLMHQ13867 455 aa8.7□□□□□ -1.02
SCG3-201ENST00000220478 ERMARDQ5T6L9 678 aa8.7□□□□□ -1.02
SCG3-201ENST00000220478 NT5DC4Q86YG4 428 aa8.7□□□□□ -1.02
SCG3-201ENST00000220478 IFT20Q8IY31 132 aa8.7□□□□□ -1.02
SCG3-201ENST00000220478 IFT81Q8WYA0 676 aa8.7□□□□□ -1.02
SCG3-201ENST00000220478 SH3GL3Q99963 347 aa8.7□□□□□ -1.02
SCG3-201ENST00000220478 TINF2Q9BSI4 451 aa8.7□□□□□ -1.02
SCG3-201ENST00000220478 IFIH1Q9BYX4 1025 aaKnown RBP8.7□□□□□ -1.02
SCG3-201ENST00000220478 TSGA10Q9BZW7 698 aa8.7□□□□□ -1.02
SCG3-201ENST00000220478 ESF1Q9H501 851 aaKnown RBP8.7□□□□□ -1.02
SCG3-201ENST00000220478 SLC52A2Q9HAB3 445 aa8.7□□□□□ -1.02
SCG3-201ENST00000220478 EXOC1Q9NV70 894 aa8.7□□□□□ -1.02
SCG3-201ENST00000220478 RBM28Q9NW13 759 aaKnown RBP8.7□□□□□ -1.02
SCG3-201ENST00000220478 BAZ2BQ9UIF8 2168 aaKnown RBP8.69□□□□□ -1.02
SCG3-201ENST00000220478 AFF2P51816 1311 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 TRIM75PA6NK02 468 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 CCT8L1PA6NM43 557 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 RBAK-RBAKDNI3L0D1 243 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 ZPR1O75312 459 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 OAS1P00973 400 aaKnown RBP8.69□□□□□ -1.02
SCG3-201ENST00000220478 VEGFAP15692 232 aaPredicted RBP8.69□□□□□ -1.02
SCG3-201ENST00000220478 DNM2P50570 870 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 RPS6KA3P51812 740 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 CDR1P51861 262 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 NBPF9Q3BBW0 867 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 UBAP2Q5T6F2 1119 aaKnown RBP8.69□□□□□ -1.02
SCG3-201ENST00000220478 MDM1Q8TC05 714 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 WHAMMQ8TF30 809 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 PRCCQ92733 491 aaPredicted RBP8.69□□□□□ -1.02
SCG3-201ENST00000220478 FERMT2Q96AC1 680 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 STRBPQ96SI9 672 aaKnown RBP8.69□□□□□ -1.02
SCG3-201ENST00000220478 RUFY1Q96T51 708 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 ZKSCAN3Q9BRR0 538 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 TUBGCP2Q9BSJ2 902 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 BATF3Q9NR55 127 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 COL18A1P39060 1754 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 PALM3A6NDB9 673 aaPredicted RBP8.69□□□□□ -1.02
SCG3-201ENST00000220478 TRIM37O94972 964 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 RARAP10276 462 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 PPP2R2AP63151 447 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 PAK2Q13177 524 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 PTGDRQ13258 359 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 ZNF174Q15697 407 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 HIBCHQ6NVY1 386 aaPredicted RBP8.69□□□□□ -1.02
SCG3-201ENST00000220478 DDX42Q86XP3 938 aaKnown RBP eCLIP8.69□□□□□ -1.02
SCG3-201ENST00000220478 ANKRD13CQ8N6S4 541 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 ANKLE1Q8NAG6 615 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 ISCUQ9H1K1 167 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 CEP131Q9UPN4 1083 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 SLC12A7Q9Y666 1083 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 GOLGA6L7A0A1B0GV03 622 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 hCG_1642624A0A1W2PR95 340 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 SNUPNO95149 360 aaKnown RBP8.69□□□□□ -1.02
SCG3-201ENST00000220478 FESP07332 822 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 CD53P19397 219 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 EIF4A3P38919 411 aaKnown RBP8.69□□□□□ -1.02
SCG3-201ENST00000220478 PEX19P40855 299 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 SLC1A4P43007 532 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 GALNTL6Q49A17 601 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 TYW1BQ6NUM6 668 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 GIMAP8Q8ND71 665 aaPredicted RBP8.69□□□□□ -1.02
SCG3-201ENST00000220478 PLBD2Q8NHP8 589 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 KRT12Q99456 494 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 RSPH9Q9H1X1 276 aaPredicted RBP8.69□□□□□ -1.02
SCG3-201ENST00000220478 HOMER3Q9NSC5 361 aa8.69□□□□□ -1.02
SCG3-201ENST00000220478 PACSIN2Q9UNF0 486 aaPredicted RBP8.69□□□□□ -1.02
SCG3-201ENST00000220478 MEGF6O75095 1541 aa8.68□□□□□ -1.02
SCG3-201ENST00000220478 A0A1B0GUL6 1792 aa8.68□□□□□ -1.02
SCG3-201ENST00000220478 LIN7AO14910 233 aaPredicted RBP8.68□□□□□ -1.02
SCG3-201ENST00000220478 TLR2O60603 784 aa8.68□□□□□ -1.02
SCG3-201ENST00000220478 ATP2C2O75185 946 aa8.68□□□□□ -1.02
SCG3-201ENST00000220478 GBP2P32456 591 aaPredicted RBP8.68□□□□□ -1.02
SCG3-201ENST00000220478 GFPT1Q06210 699 aaPredicted RBP8.68□□□□□ -1.02
SCG3-201ENST00000220478 SEC23AQ15436 765 aa8.68□□□□□ -1.02
SCG3-201ENST00000220478 ALX1Q15699 326 aa8.68□□□□□ -1.02
SCG3-201ENST00000220478 TTC39BQ5VTQ0 682 aaPredicted RBP8.68□□□□□ -1.02
SCG3-201ENST00000220478 ANKRD40Q6AI12 368 aa8.68□□□□□ -1.02
SCG3-201ENST00000220478 CACNA2D3Q8IZS8 1091 aa8.68□□□□□ -1.02
SCG3-201ENST00000220478 SEC14L1Q92503 715 aa8.68□□□□□ -1.02
SCG3-201ENST00000220478 ITFG2Q969R8 447 aa8.68□□□□□ -1.02
SCG3-201ENST00000220478 TNRQ92752 1358 aa8.68□□□□□ -1.02
SCG3-201ENST00000220478 ERICH2A1L162 156 aa8.68□□□□□ -1.02
SCG3-201ENST00000220478 BUB1O43683 1085 aa8.68□□□□□ -1.02
SCG3-201ENST00000220478 TACC1O75410 805 aa8.68□□□□□ -1.02
SCG3-201ENST00000220478 PCCAP05165 728 aaPredicted RBP8.68□□□□□ -1.02
SCG3-201ENST00000220478 NCALDP61601 193 aa8.68□□□□□ -1.02
SCG3-201ENST00000220478 RTN1Q16799 776 aa8.68□□□□□ -1.02
SCG3-201ENST00000220478 MEI1Q5TIA1 1274 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms