RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 TBC1D22AQ8WUA7 517 aa19.07■□□□□ 0.64
USB1-201ENST00000219281 LTBP1Q14766 1721 aa19.07■□□□□ 0.64
USB1-201ENST00000219281 C8orf74Q6P047 294 aa19.07■□□□□ 0.64
USB1-201ENST00000219281 TSEN2Q8NCE0 465 aaKnown RBP19.07■□□□□ 0.64
USB1-201ENST00000219281 DNAJC19Q96DA6 116 aa19.07■□□□□ 0.64
USB1-201ENST00000219281 EDEM3Q9BZQ6 932 aa19.07■□□□□ 0.64
USB1-201ENST00000219281 TBC1D7Q9P0N9 293 aa19.07■□□□□ 0.64
USB1-201ENST00000219281 ANKRD31Q8N7Z5 1873 aa19.06■□□□□ 0.64
USB1-201ENST00000219281 NOL4O94818 638 aa19.06■□□□□ 0.64
USB1-201ENST00000219281 SSBP05455 408 aaKnown RBP eCLIP19.06■□□□□ 0.64
USB1-201ENST00000219281 PLCG2P16885 1265 aa19.06■□□□□ 0.64
USB1-201ENST00000219281 FKBP3Q00688 224 aaKnown RBP19.06■□□□□ 0.64
USB1-201ENST00000219281 SLC9C1Q4G0N8 1177 aa19.06■□□□□ 0.64
USB1-201ENST00000219281 SFMBT2Q5VUG0 894 aa19.06■□□□□ 0.64
USB1-201ENST00000219281 CLEC10AQ8IUN9 316 aa19.06■□□□□ 0.64
USB1-201ENST00000219281 RNF10Q8N5U6 811 aaKnown RBP19.06■□□□□ 0.64
USB1-201ENST00000219281 LSM14BQ9BX40 385 aaKnown RBP19.06■□□□□ 0.64
USB1-201ENST00000219281 PANK4Q9NVE7 773 aa19.06■□□□□ 0.64
USB1-201ENST00000219281 MTMR4Q9NYA4 1195 aa19.06■□□□□ 0.64
USB1-201ENST00000219281 CEP72Q9P209 647 aa19.06■□□□□ 0.64
USB1-201ENST00000219281 TLR2O60603 784 aa19.05■□□□□ 0.64
USB1-201ENST00000219281 APBA1Q02410 837 aa19.05■□□□□ 0.64
USB1-201ENST00000219281 FAM83BQ5T0W9 1011 aa19.05■□□□□ 0.64
USB1-201ENST00000219281 CERS5Q8N5B7 392 aa19.05■□□□□ 0.64
USB1-201ENST00000219281 HAS1Q92839 578 aa19.05■□□□□ 0.64
USB1-201ENST00000219281 FGFBP2Q9BYJ0 223 aa19.05■□□□□ 0.64
USB1-201ENST00000219281 DDX25Q9UHL0 483 aaKnown RBP19.05■□□□□ 0.64
USB1-201ENST00000219281 GOLGA8KD6RF30 607 aa19.05■□□□□ 0.64
USB1-201ENST00000219281 RBAK-RBAKDNI3L0D1 243 aa19.05■□□□□ 0.64
USB1-201ENST00000219281 MARCH6O60337 910 aa19.05■□□□□ 0.64
USB1-201ENST00000219281 DNA2P51530 1060 aa19.05■□□□□ 0.64
USB1-201ENST00000219281 IRAK1P51617 712 aa19.05■□□□□ 0.64
USB1-201ENST00000219281 POLR2FP61218 127 aaKnown RBP19.05■□□□□ 0.64
USB1-201ENST00000219281 ZCWPW2Q504Y3 356 aa19.05■□□□□ 0.64
USB1-201ENST00000219281 ASPRV1Q53RT3 343 aa19.05■□□□□ 0.64
USB1-201ENST00000219281 EMBQ6PCB8 327 aa19.05■□□□□ 0.64
USB1-201ENST00000219281 UIMC1Q96RL1 719 aa19.05■□□□□ 0.64
USB1-201ENST00000219281 SH3GL2Q99962 352 aa19.05■□□□□ 0.64
USB1-201ENST00000219281 COA1Q9GZY4 146 aa19.05■□□□□ 0.64
USB1-201ENST00000219281 DAGLAQ9Y4D2 1042 aa19.05■□□□□ 0.64
USB1-201ENST00000219281 LRRC37AA6NMS7 1700 aa19.05■□□□□ 0.64
USB1-201ENST00000219281 OPA1O60313 960 aa19.04■□□□□ 0.64
USB1-201ENST00000219281 SERPING1P05155 500 aa19.04■□□□□ 0.64
USB1-201ENST00000219281 MMP10P09238 476 aa19.04■□□□□ 0.64
USB1-201ENST00000219281 MAGEA9P43362 315 aa19.04■□□□□ 0.64
USB1-201ENST00000219281 PPFIA1Q13136 1202 aa19.04■□□□□ 0.64
USB1-201ENST00000219281 CFAP221Q4G0U5 840 aa19.04■□□□□ 0.64
USB1-201ENST00000219281 FAM26FQ5R3K3 315 aa19.04■□□□□ 0.64
USB1-201ENST00000219281 PPP4R3AQ6IN85 833 aa19.04■□□□□ 0.64
USB1-201ENST00000219281 NELFCDQ8IXH7 590 aa19.04■□□□□ 0.64
USB1-201ENST00000219281 KANSL2Q9H9L4 492 aa19.04■□□□□ 0.64
USB1-201ENST00000219281 MYH10P35580 1976 aa19.04■□□□□ 0.64
USB1-201ENST00000219281 PALMO75781 387 aa19.04■□□□□ 0.64
USB1-201ENST00000219281 AKR1B1P15121 316 aa19.04■□□□□ 0.64
USB1-201ENST00000219281 NPR1P16066 1061 aa19.04■□□□□ 0.64
USB1-201ENST00000219281 HOXA7P31268 230 aaPredicted RBP19.04■□□□□ 0.64
USB1-201ENST00000219281 CORO7P57737 925 aa19.04■□□□□ 0.64
USB1-201ENST00000219281 PICALMQ13492 652 aa19.04■□□□□ 0.64
USB1-201ENST00000219281 DNAJC21Q5F1R6 531 aaKnown RBP19.04■□□□□ 0.64
USB1-201ENST00000219281 MXD3Q9BW11 206 aa19.04■□□□□ 0.64
USB1-201ENST00000219281 CAPS2Q9BXY5 557 aa19.04■□□□□ 0.64
USB1-201ENST00000219281 JMJD4Q9H9V9 463 aa19.04■□□□□ 0.64
USB1-201ENST00000219281 TSKSQ9UJT2 592 aa19.04■□□□□ 0.64
USB1-201ENST00000219281 CDK5RAP2Q96SN8 1893 aa19.04■□□□□ 0.64
USB1-201ENST00000219281 PPP1R11O60927 126 aaPredicted RBP19.03■□□□□ 0.64
USB1-201ENST00000219281 HSF2BPO75031 334 aa19.03■□□□□ 0.64
USB1-201ENST00000219281 FTCDO95954 541 aa19.03■□□□□ 0.64
USB1-201ENST00000219281 FOXR2Q6PJQ5 311 aa19.03■□□□□ 0.64
USB1-201ENST00000219281 DPP8Q6V1X1 898 aaPredicted RBP19.03■□□□□ 0.64
USB1-201ENST00000219281 ADGRF4Q8IZF3 695 aa19.03■□□□□ 0.64
USB1-201ENST00000219281 CAVIN3Q969G5 261 aa19.03■□□□□ 0.64
USB1-201ENST00000219281 RUFY1Q96T51 708 aa19.03■□□□□ 0.64
USB1-201ENST00000219281 NUCKS1Q9H1E3 243 aaKnown RBP19.03■□□□□ 0.64
USB1-201ENST00000219281 EHD4Q9H223 541 aa19.03■□□□□ 0.64
USB1-201ENST00000219281 PNMA6FA0A0J9YX94 578 aa19.03■□□□□ 0.64
USB1-201ENST00000219281 E9PMD0 336 aa19.03■□□□□ 0.64
USB1-201ENST00000219281 TNFRSF8P28908 595 aa19.03■□□□□ 0.64
USB1-201ENST00000219281 CACNB1Q02641 598 aaPredicted RBP19.03■□□□□ 0.64
USB1-201ENST00000219281 ARID5AQ03989 594 aa19.03■□□□□ 0.64
USB1-201ENST00000219281 GLE1Q53GS7 698 aaKnown RBP19.03■□□□□ 0.64
USB1-201ENST00000219281 ALS2CLQ60I27 953 aa19.03■□□□□ 0.64
USB1-201ENST00000219281 SLF2Q8IX21 1173 aa19.03■□□□□ 0.64
USB1-201ENST00000219281 TBC1D5Q92609 795 aa19.03■□□□□ 0.64
USB1-201ENST00000219281 SYN2Q92777 582 aaPredicted RBP19.03■□□□□ 0.64
USB1-201ENST00000219281 ARL8AQ96BM9 186 aa19.03■□□□□ 0.64
USB1-201ENST00000219281 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.03■□□□□ 0.64
USB1-201ENST00000219281 ZC3H12CQ9C0D7 883 aaKnown RBP19.03■□□□□ 0.64
USB1-201ENST00000219281 NPHP3-ACAD11A0A0J9YXS1 232 aa19.02■□□□□ 0.64
USB1-201ENST00000219281 F8W031 263 aaPredicted RBP19.02■□□□□ 0.64
USB1-201ENST00000219281 GLI1P08151 1106 aa19.02■□□□□ 0.64
USB1-201ENST00000219281 SNHG28P0DPA3 235 aa19.02■□□□□ 0.64
USB1-201ENST00000219281 HMGB2P26583 209 aaKnown RBP19.02■□□□□ 0.64
USB1-201ENST00000219281 ENOX2Q16206 610 aaKnown RBP19.02■□□□□ 0.64
USB1-201ENST00000219281 DOK7Q18PE1 504 aa19.02■□□□□ 0.64
USB1-201ENST00000219281 TTMPQ5BVD1 217 aa19.02■□□□□ 0.64
USB1-201ENST00000219281 TTC19Q6DKK2 380 aaPredicted RBP19.02■□□□□ 0.64
USB1-201ENST00000219281 TTBK2Q6IQ55 1244 aa19.02■□□□□ 0.64
USB1-201ENST00000219281 ARHGAP27Q6ZUM4 889 aa19.02■□□□□ 0.64
USB1-201ENST00000219281 RABEP2Q9H5N1 569 aa19.02■□□□□ 0.64
USB1-201ENST00000219281 BMP2KQ9NSY1 1161 aaPredicted RBP19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms