RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 ARMC5Q96C12 935 aa14.88□□□□□ -0.03
TIMP1-201ENST00000218388 USP28Q96RU2 1077 aa14.88□□□□□ -0.03
TIMP1-201ENST00000218388 TEKT3Q9BXF9 490 aa14.88□□□□□ -0.03
TIMP1-201ENST00000218388 RAB34Q9BZG1 259 aa14.88□□□□□ -0.03
TIMP1-201ENST00000218388 MCOLN1Q9GZU1 580 aa14.88□□□□□ -0.03
TIMP1-201ENST00000218388 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.88□□□□□ -0.03
TIMP1-201ENST00000218388 AP5M1Q9H0R1 490 aa14.88□□□□□ -0.03
TIMP1-201ENST00000218388 DDX20Q9UHI6 824 aaKnown RBP14.88□□□□□ -0.03
TIMP1-201ENST00000218388 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.87□□□□□ -0.03
TIMP1-201ENST00000218388 ATP9AO75110 1047 aa14.87□□□□□ -0.03
TIMP1-201ENST00000218388 ARIH2O95376 493 aa14.87□□□□□ -0.03
TIMP1-201ENST00000218388 NASPP49321 788 aaPredicted RBP14.87□□□□□ -0.03
TIMP1-201ENST00000218388 KRT76Q01546 638 aa14.87□□□□□ -0.03
TIMP1-201ENST00000218388 CEBPZQ03701 1054 aaKnown RBP14.87□□□□□ -0.03
TIMP1-201ENST00000218388 LAMC2Q13753 1193 aa14.87□□□□□ -0.03
TIMP1-201ENST00000218388 CELF3Q5SZQ8 465 aaKnown RBP14.87□□□□□ -0.03
TIMP1-201ENST00000218388 TLK2Q86UE8 772 aa14.87□□□□□ -0.03
TIMP1-201ENST00000218388 OR6J1Q8NGC5 347 aa14.87□□□□□ -0.03
TIMP1-201ENST00000218388 EMID1Q96A84 441 aaPredicted RBP14.87□□□□□ -0.03
TIMP1-201ENST00000218388 ZNF333Q96JL9 665 aa14.87□□□□□ -0.03
TIMP1-201ENST00000218388 MTMR9Q96QG7 549 aa14.87□□□□□ -0.03
TIMP1-201ENST00000218388 SCAND2PQ9GZW5 306 aaPredicted RBP14.87□□□□□ -0.03
TIMP1-201ENST00000218388 TMEM60Q9H2L4 133 aa14.87□□□□□ -0.03
TIMP1-201ENST00000218388 JPH1Q9HDC5 661 aaPredicted RBP14.87□□□□□ -0.03
TIMP1-201ENST00000218388 SLC9A2Q9UBY0 812 aa14.87□□□□□ -0.03
TIMP1-201ENST00000218388 PCDHA12Q9UN75 941 aa14.87□□□□□ -0.03
TIMP1-201ENST00000218388 CLIC4Q9Y696 253 aa14.87□□□□□ -0.03
TIMP1-201ENST00000218388 MORC2Q9Y6X9 1032 aaPredicted RBP14.87□□□□□ -0.03
TIMP1-201ENST00000218388 NOP56O00567 594 aaKnown RBP14.86□□□□□ -0.03
TIMP1-201ENST00000218388 CCL5P13501 91 aa14.86□□□□□ -0.03
TIMP1-201ENST00000218388 TXKP42681 527 aa14.86□□□□□ -0.03
TIMP1-201ENST00000218388 SP2Q02086 613 aa14.86□□□□□ -0.03
TIMP1-201ENST00000218388 ITGB3BPQ13352 177 aaPredicted RBP14.86□□□□□ -0.03
TIMP1-201ENST00000218388 SLC39A14Q15043 492 aa14.86□□□□□ -0.03
TIMP1-201ENST00000218388 DTHD1Q6ZMT9 781 aa14.86□□□□□ -0.03
TIMP1-201ENST00000218388 CYFIP1Q7L576 1253 aa14.86□□□□□ -0.03
TIMP1-201ENST00000218388 KCNG4Q8TDN1 519 aa14.86□□□□□ -0.03
TIMP1-201ENST00000218388 HAS1Q92839 578 aa14.86□□□□□ -0.03
TIMP1-201ENST00000218388 FERMT2Q96AC1 680 aa14.86□□□□□ -0.03
TIMP1-201ENST00000218388 FTOQ9C0B1 505 aaKnown RBP eCLIP14.86□□□□□ -0.03
TIMP1-201ENST00000218388 RNF208Q9H0X6 261 aa14.86□□□□□ -0.03
TIMP1-201ENST00000218388 UNC93B1Q9H1C4 597 aa14.86□□□□□ -0.03
TIMP1-201ENST00000218388 TTC12Q9H892 705 aaPredicted RBP14.86□□□□□ -0.03
TIMP1-201ENST00000218388 TFIP11Q9UBB9 837 aaKnown RBP14.86□□□□□ -0.03
TIMP1-201ENST00000218388 GNEQ9Y223 722 aaKnown RBP14.86□□□□□ -0.03
TIMP1-201ENST00000218388 DOCK5Q9H7D0 1870 aa14.86□□□□□ -0.03
TIMP1-201ENST00000218388 DDX39AO00148 427 aaKnown RBP14.85□□□□□ -0.03
TIMP1-201ENST00000218388 SPTLC2O15270 562 aa14.85□□□□□ -0.03
TIMP1-201ENST00000218388 DYNC1LI2O43237 492 aaPredicted RBP14.85□□□□□ -0.03
TIMP1-201ENST00000218388 PSMD10O75832 226 aa14.85□□□□□ -0.03
TIMP1-201ENST00000218388 FARP2O94887 1054 aaPredicted RBP14.85□□□□□ -0.03
TIMP1-201ENST00000218388 SFNP31947 248 aa14.85□□□□□ -0.03
TIMP1-201ENST00000218388 CPT1AP50416 773 aa14.85□□□□□ -0.03
TIMP1-201ENST00000218388 ARHGAP1Q07960 439 aa14.85□□□□□ -0.03
TIMP1-201ENST00000218388 PTPAQ15257 358 aa14.85□□□□□ -0.03
TIMP1-201ENST00000218388 CSPP1Q1MSJ5 1256 aa14.85□□□□□ -0.03
TIMP1-201ENST00000218388 ZNF746Q6NUN9 644 aaPredicted RBP14.85□□□□□ -0.03
TIMP1-201ENST00000218388 SMAP1Q8IYB5 467 aaPredicted RBP14.85□□□□□ -0.03
TIMP1-201ENST00000218388 C4orf32Q8N8J7 132 aa14.85□□□□□ -0.03
TIMP1-201ENST00000218388 LINC00301Q8NCQ3 95 aa14.85□□□□□ -0.03
TIMP1-201ENST00000218388 RDM1Q8NG50 284 aa14.85□□□□□ -0.03
TIMP1-201ENST00000218388 PPTC7Q8NI37 304 aa14.85□□□□□ -0.03
TIMP1-201ENST00000218388 COPS5Q92905 334 aa14.85□□□□□ -0.03
TIMP1-201ENST00000218388 TNPO1Q92973 898 aaKnown RBP14.85□□□□□ -0.03
TIMP1-201ENST00000218388 SPATA32Q96LK8 384 aa14.85□□□□□ -0.03
TIMP1-201ENST00000218388 SPATA33Q96N06 139 aa14.85□□□□□ -0.03
TIMP1-201ENST00000218388 XPNPEP3Q9NQH7 507 aa14.85□□□□□ -0.03
TIMP1-201ENST00000218388 PAK6Q9NQU5 681 aaPredicted RBP14.85□□□□□ -0.03
TIMP1-201ENST00000218388 TCHHQ07283 1943 aa14.85□□□□□ -0.03
TIMP1-201ENST00000218388 ELP1O95163 1332 aa14.85□□□□□ -0.03
TIMP1-201ENST00000218388 FRMPD3Q5JV73 1810 aa14.85□□□□□ -0.03
TIMP1-201ENST00000218388 WDR64B1ANS9 1081 aa14.84□□□□□ -0.03
TIMP1-201ENST00000218388 DHX15O43143 795 aaKnown RBP14.84□□□□□ -0.03
TIMP1-201ENST00000218388 ADCY6O43306 1168 aa14.84□□□□□ -0.03
TIMP1-201ENST00000218388 ZEB2O60315 1214 aa14.84□□□□□ -0.03
TIMP1-201ENST00000218388 PPP6R2O75170 966 aa14.84□□□□□ -0.03
TIMP1-201ENST00000218388 FXR2P51116 673 aaKnown RBP eCLIP14.84□□□□□ -0.03
TIMP1-201ENST00000218388 JAK3P52333 1124 aa14.84□□□□□ -0.03
TIMP1-201ENST00000218388 GJA9P57773 515 aa14.84□□□□□ -0.03
TIMP1-201ENST00000218388 SP4Q02446 784 aa14.84□□□□□ -0.03
TIMP1-201ENST00000218388 PPP2R5CQ13362 524 aa14.84□□□□□ -0.03
TIMP1-201ENST00000218388 GJC2Q5T442 439 aaPredicted RBP14.84□□□□□ -0.03
TIMP1-201ENST00000218388 MIER3Q7Z3K6 550 aa14.84□□□□□ -0.03
TIMP1-201ENST00000218388 UIMC1Q96RL1 719 aa14.84□□□□□ -0.03
TIMP1-201ENST00000218388 UPF3AQ9H1J1 476 aaKnown RBP14.84□□□□□ -0.03
TIMP1-201ENST00000218388 SAMM50Q9Y512 469 aa14.84□□□□□ -0.03
TIMP1-201ENST00000218388 STK24Q9Y6E0 443 aa14.84□□□□□ -0.03
TIMP1-201ENST00000218388 SYNRGQ9UMZ2 1314 aa14.84□□□□□ -0.03
TIMP1-201ENST00000218388 CHMP2AO43633 222 aa14.83□□□□□ -0.04
TIMP1-201ENST00000218388 SORBS3O60504 671 aa14.83□□□□□ -0.04
TIMP1-201ENST00000218388 MYCP01106 439 aaPredicted RBP14.83□□□□□ -0.04
TIMP1-201ENST00000218388 C6orf222P0C671 652 aaPredicted RBP14.83□□□□□ -0.04
TIMP1-201ENST00000218388 CAPN2P17655 700 aa14.83□□□□□ -0.04
TIMP1-201ENST00000218388 TECP42680 631 aa14.83□□□□□ -0.04
TIMP1-201ENST00000218388 ACTR2P61160 394 aa14.83□□□□□ -0.04
TIMP1-201ENST00000218388 PDIA5Q14554 519 aa14.83□□□□□ -0.04
TIMP1-201ENST00000218388 MTFR1Q15390 333 aa14.83□□□□□ -0.04
TIMP1-201ENST00000218388 FSCN1Q16658 493 aaKnown RBP14.83□□□□□ -0.04
TIMP1-201ENST00000218388 NCAPH2Q6IBW4 605 aa14.83□□□□□ -0.04
TIMP1-201ENST00000218388 MIS18BP1Q6P0N0 1132 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms