RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 DAGLAQ9Y4D2 1042 aa14.68□□□□□ -0.06
SRP54-201ENST00000216774 TAF1LQ8IZX4 1826 aa14.67□□□□□ -0.06
SRP54-201ENST00000216774 TRIM66O15016 1216 aa14.67□□□□□ -0.06
SRP54-201ENST00000216774 NCK2O43639 380 aa14.67□□□□□ -0.06
SRP54-201ENST00000216774 PPP1R11O60927 126 aaPredicted RBP14.67□□□□□ -0.06
SRP54-201ENST00000216774 AKR1B1P15121 316 aa14.67□□□□□ -0.06
SRP54-201ENST00000216774 MATR3P43243 847 aaKnown RBP eCLIP14.67□□□□□ -0.065e-10■■■■□ 24.4
SRP54-201ENST00000216774 UBE2SQ16763 222 aa14.67□□□□□ -0.06
SRP54-201ENST00000216774 GPATCH4Q5T3I0 446 aaKnown RBP14.67□□□□□ -0.06
SRP54-201ENST00000216774 PRR5LQ6MZQ0 368 aa14.67□□□□□ -0.06
SRP54-201ENST00000216774 ZC3H3Q8IXZ2 948 aaKnown RBP14.67□□□□□ -0.06
SRP54-201ENST00000216774 ANKRD13CQ8N6S4 541 aa14.67□□□□□ -0.06
SRP54-201ENST00000216774 GLT8D2Q9H1C3 349 aa14.67□□□□□ -0.06
SRP54-201ENST00000216774 RBM12Q9NTZ6 932 aaKnown RBP14.67□□□□□ -0.06
SRP54-201ENST00000216774 PCDHA2Q9Y5H9 948 aa14.67□□□□□ -0.06
SRP54-201ENST00000216774 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.67□□□□□ -0.06
SRP54-201ENST00000216774 GRID2IPA4D2P6 1211 aa14.67□□□□□ -0.06
SRP54-201ENST00000216774 MARCH6O60337 910 aa14.67□□□□□ -0.06
SRP54-201ENST00000216774 SLC7A5Q01650 507 aa14.67□□□□□ -0.06
SRP54-201ENST00000216774 SLC18A3Q16572 532 aa14.67□□□□□ -0.06
SRP54-201ENST00000216774 DPP8Q6V1X1 898 aaPredicted RBP14.67□□□□□ -0.06
SRP54-201ENST00000216774 PPP4R3CPQ6ZMV5 832 aa14.67□□□□□ -0.06
SRP54-201ENST00000216774 IFT20Q8IY31 132 aa14.67□□□□□ -0.06
SRP54-201ENST00000216774 RBM17Q96I25 401 aaKnown RBP14.67□□□□□ -0.06
SRP54-201ENST00000216774 PSMB7Q99436 277 aa14.67□□□□□ -0.06
SRP54-201ENST00000216774 LSM14BQ9BX40 385 aaKnown RBP14.67□□□□□ -0.06
SRP54-201ENST00000216774 NLRC4Q9NPP4 1024 aa14.67□□□□□ -0.06
SRP54-201ENST00000216774 AIPL1Q9NZN9 384 aa14.67□□□□□ -0.06
SRP54-201ENST00000216774 PCDHGC5Q9Y5F6 944 aa14.67□□□□□ -0.06
SRP54-201ENST00000216774 A6NNZ2 444 aa14.66□□□□□ -0.06
SRP54-201ENST00000216774 ZBTB5O15062 677 aa14.66□□□□□ -0.06
SRP54-201ENST00000216774 BUB1O43683 1085 aa14.66□□□□□ -0.06
SRP54-201ENST00000216774 HSF2BPO75031 334 aa14.66□□□□□ -0.06
SRP54-201ENST00000216774 BBOX1O75936 387 aa14.66□□□□□ -0.06
SRP54-201ENST00000216774 NAP1L1P55209 391 aaKnown RBP14.66□□□□□ -0.06
SRP54-201ENST00000216774 POLR2FP61218 127 aaKnown RBP14.66□□□□□ -0.06
SRP54-201ENST00000216774 TUBB8Q3ZCM7 444 aa14.66□□□□□ -0.06
SRP54-201ENST00000216774 PSTPIP2Q9H939 334 aa14.66□□□□□ -0.06
SRP54-201ENST00000216774 ATF5Q9Y2D1 282 aaPredicted RBP14.66□□□□□ -0.06
SRP54-201ENST00000216774 SUGT1Q9Y2Z0 365 aa14.66□□□□□ -0.06
SRP54-201ENST00000216774 LY75O60449 1722 aa14.66□□□□□ -0.06
SRP54-201ENST00000216774 ERCC3P19447 782 aa14.66□□□□□ -0.06
SRP54-201ENST00000216774 MAGEA9P43362 315 aa14.66□□□□□ -0.06
SRP54-201ENST00000216774 CORO7P57737 925 aa14.66□□□□□ -0.06
SRP54-201ENST00000216774 EDRF1Q3B7T1 1238 aa14.66□□□□□ -0.06
SRP54-201ENST00000216774 DNAJC21Q5F1R6 531 aaKnown RBP14.66□□□□□ -0.06
SRP54-201ENST00000216774 TBC1D16Q8TBP0 767 aa14.66□□□□□ -0.06
SRP54-201ENST00000216774 RUFY1Q96T51 708 aa14.66□□□□□ -0.06
SRP54-201ENST00000216774 KCTD10Q9H3F6 313 aa14.66□□□□□ -0.06
SRP54-201ENST00000216774 GDF3Q9NR23 364 aa14.66□□□□□ -0.06
SRP54-201ENST00000216774 SMARCAL1Q9NZC9 954 aa14.66□□□□□ -0.06
SRP54-201ENST00000216774 EHD2Q9NZN4 543 aa14.66□□□□□ -0.06
SRP54-201ENST00000216774 SERPINB13Q9UIV8 391 aa14.66□□□□□ -0.06
SRP54-201ENST00000216774 ATAD5Q96QE3 1844 aa14.66□□□□□ -0.06
SRP54-201ENST00000216774 FRMD3A2A2Y4 597 aa14.65□□□□□ -0.06
SRP54-201ENST00000216774 BTNL10A8MVZ5 291 aa14.65□□□□□ -0.06
SRP54-201ENST00000216774 PALMO75781 387 aa14.65□□□□□ -0.06
SRP54-201ENST00000216774 PLA2G4BP0C869 781 aa14.65□□□□□ -0.06
SRP54-201ENST00000216774 ADRA2BP18089 450 aa14.65□□□□□ -0.06
SRP54-201ENST00000216774 IRAK1P51617 712 aa14.65□□□□□ -0.06
SRP54-201ENST00000216774 APBA1Q02410 837 aa14.65□□□□□ -0.06
SRP54-201ENST00000216774 HINFPQ9BQA5 517 aa14.65□□□□□ -0.06
SRP54-201ENST00000216774 CAPS2Q9BXY5 557 aa14.65□□□□□ -0.06
SRP54-201ENST00000216774 FAM107BQ9H098 131 aa14.65□□□□□ -0.06
SRP54-201ENST00000216774 MYH10P35580 1976 aa14.65□□□□□ -0.06
SRP54-201ENST00000216774 PITPNM2Q9BZ72 1349 aa14.65□□□□□ -0.06
SRP54-201ENST00000216774 SSBP05455 408 aaKnown RBP eCLIP14.64□□□□□ -0.07
SRP54-201ENST00000216774 USP11P51784 963 aa14.64□□□□□ -0.07
SRP54-201ENST00000216774 EIF6P56537 245 aaKnown RBP14.64□□□□□ -0.07
SRP54-201ENST00000216774 PAK2Q13177 524 aa14.64□□□□□ -0.07
SRP54-201ENST00000216774 C10orf76Q5T2E6 689 aa14.64□□□□□ -0.07
SRP54-201ENST00000216774 MEI1Q5TIA1 1274 aa14.64□□□□□ -0.07
SRP54-201ENST00000216774 SCFD1Q8WVM8 642 aa14.64□□□□□ -0.07
SRP54-201ENST00000216774 TBC1D5Q92609 795 aa14.64□□□□□ -0.07
SRP54-201ENST00000216774 POLLQ9UGP5 575 aa14.64□□□□□ -0.07
SRP54-201ENST00000216774 KIAA1024Q9UPX6 916 aa14.64□□□□□ -0.07
SRP54-201ENST00000216774 CES2O00748 559 aa14.64□□□□□ -0.07
SRP54-201ENST00000216774 KLHL30Q0D2K2 578 aa14.64□□□□□ -0.07
SRP54-201ENST00000216774 PICALMQ13492 652 aa14.64□□□□□ -0.07
SRP54-201ENST00000216774 HERC4Q5GLZ8 1057 aaPredicted RBP14.64□□□□□ -0.07
SRP54-201ENST00000216774 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.64□□□□□ -0.07
SRP54-201ENST00000216774 GPBP1Q86WP2 473 aa14.64□□□□□ -0.07
SRP54-201ENST00000216774 GPIHBP1Q8IV16 184 aa14.64□□□□□ -0.07
SRP54-201ENST00000216774 MREGQ8N565 214 aa14.64□□□□□ -0.07
SRP54-201ENST00000216774 TSEN2Q8NCE0 465 aaKnown RBP14.64□□□□□ -0.07
SRP54-201ENST00000216774 MS4A14Q96JA4 679 aa14.64□□□□□ -0.07
SRP54-201ENST00000216774 FGFBP2Q9BYJ0 223 aa14.64□□□□□ -0.07
SRP54-201ENST00000216774 GANQ9H2C0 597 aa14.64□□□□□ -0.07
SRP54-201ENST00000216774 KCNMB3Q9NPA1 279 aa14.64□□□□□ -0.07
SRP54-201ENST00000216774 EMILIN3Q9NT22 766 aa14.64□□□□□ -0.07
SRP54-201ENST00000216774 CYP3A7-CYP3A51PA0A087WV96 503 aa14.63□□□□□ -0.07
SRP54-201ENST00000216774 E9PMD0 336 aa14.63□□□□□ -0.07
SRP54-201ENST00000216774 CYP11B2P19099 503 aa14.63□□□□□ -0.07
SRP54-201ENST00000216774 CYP3A7P24462 503 aa14.63□□□□□ -0.07
SRP54-201ENST00000216774 KLRC1P26715 233 aa14.63□□□□□ -0.07
SRP54-201ENST00000216774 EPS15P42566 896 aa14.63□□□□□ -0.07
SRP54-201ENST00000216774 RAPGEF1Q13905 1077 aa14.63□□□□□ -0.07
SRP54-201ENST00000216774 ASIC2Q16515 512 aa14.63□□□□□ -0.07
SRP54-201ENST00000216774 CLEC10AQ8IUN9 316 aa14.63□□□□□ -0.07
SRP54-201ENST00000216774 NELFCDQ8IXH7 590 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms