RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 STAM2O75886 525 aa17.29■□□□□ 0.36
UPK3A-201ENST00000216211 LGALS2P05162 132 aa17.29■□□□□ 0.36
UPK3A-201ENST00000216211 SMARCA1P28370 1054 aa17.29■□□□□ 0.36
UPK3A-201ENST00000216211 TAP1Q03518 808 aa17.29■□□□□ 0.36
UPK3A-201ENST00000216211 MBTPS1Q14703 1052 aa17.29■□□□□ 0.36
UPK3A-201ENST00000216211 CREB3L3Q68CJ9 461 aa17.29■□□□□ 0.36
UPK3A-201ENST00000216211 CYFIP1Q7L576 1253 aa17.29■□□□□ 0.36
UPK3A-201ENST00000216211 SKAP1Q86WV1 359 aa17.29■□□□□ 0.36
UPK3A-201ENST00000216211 ATXN2LQ8WWM7 1075 aaKnown RBP17.29■□□□□ 0.36
UPK3A-201ENST00000216211 CUL5Q93034 780 aa17.29■□□□□ 0.36
UPK3A-201ENST00000216211 LRRC2Q9BYS8 371 aa17.29■□□□□ 0.36
UPK3A-201ENST00000216211 TUT1Q9H6E5 874 aaKnown RBP17.29■□□□□ 0.36
UPK3A-201ENST00000216211 PRRC2BQ5JSZ5 2229 aaKnown RBP17.29■□□□□ 0.36
UPK3A-201ENST00000216211 C17orf102A2RUQ5 167 aa17.28■□□□□ 0.36
UPK3A-201ENST00000216211 NOP56O00567 594 aaKnown RBP17.28■□□□□ 0.36
UPK3A-201ENST00000216211 MEIS2O14770 477 aa17.28■□□□□ 0.36
UPK3A-201ENST00000216211 FIBPO43427 364 aa17.28■□□□□ 0.36
UPK3A-201ENST00000216211 GNAQP50148 359 aa17.28■□□□□ 0.36
UPK3A-201ENST00000216211 NEDD9Q14511 834 aa17.28■□□□□ 0.36
UPK3A-201ENST00000216211 NECTIN1Q15223 517 aa17.28■□□□□ 0.36
UPK3A-201ENST00000216211 CENPQQ7L2Z9 268 aaPredicted RBP17.28■□□□□ 0.36
UPK3A-201ENST00000216211 SPRED2Q7Z698 418 aa17.28■□□□□ 0.36
UPK3A-201ENST00000216211 TMTC2Q8N394 836 aa17.28■□□□□ 0.36
UPK3A-201ENST00000216211 ARNTL2Q8WYA1 636 aa17.28■□□□□ 0.36
UPK3A-201ENST00000216211 LZTS2Q9BRK4 669 aa17.28■□□□□ 0.36
UPK3A-201ENST00000216211 ANO2Q9NQ90 1003 aa17.28■□□□□ 0.36
UPK3A-201ENST00000216211 TELO2Q9Y4R8 837 aa17.28■□□□□ 0.36
UPK3A-201ENST00000216211 MUC3AQ02505 3323 aa17.27■□□□□ 0.36
UPK3A-201ENST00000216211 hCG_1642624A0A1W2PR95 340 aa17.27■□□□□ 0.36
UPK3A-201ENST00000216211 LCHNA4D1U4 455 aa17.27■□□□□ 0.36
UPK3A-201ENST00000216211 PIK3CDO00329 1044 aa17.27■□□□□ 0.36
UPK3A-201ENST00000216211 SMIM10L2AP0DMW4 78 aa17.27■□□□□ 0.36
UPK3A-201ENST00000216211 SMIM10L2BP0DMW5 78 aa17.27■□□□□ 0.36
UPK3A-201ENST00000216211 LIFRP42702 1097 aa17.27■□□□□ 0.36
UPK3A-201ENST00000216211 PCNX4Q63HM2 1172 aa17.27■□□□□ 0.36
UPK3A-201ENST00000216211 METTL7BQ6UX53 244 aa17.27■□□□□ 0.36
UPK3A-201ENST00000216211 SERINC5Q86VE9 423 aa17.27■□□□□ 0.36
UPK3A-201ENST00000216211 ATP6V0A1Q93050 837 aa17.27■□□□□ 0.36
UPK3A-201ENST00000216211 ASB2Q96Q27 587 aa17.27■□□□□ 0.36
UPK3A-201ENST00000216211 GPR20Q99678 358 aa17.27■□□□□ 0.36
UPK3A-201ENST00000216211 ZBED2Q9BTP6 218 aa17.27■□□□□ 0.36
UPK3A-201ENST00000216211 MTCH2Q9Y6C9 303 aa17.27■□□□□ 0.36
UPK3A-201ENST00000216211 ABHD14A-ACY1A0A1B0GW23 586 aa17.26■□□□□ 0.35
UPK3A-201ENST00000216211 RSPH10B2B2RC85 870 aa17.26■□□□□ 0.35
UPK3A-201ENST00000216211 TREHO43280 583 aa17.26■□□□□ 0.35
UPK3A-201ENST00000216211 GTPBP6O43824 516 aaPredicted RBP17.26■□□□□ 0.35
UPK3A-201ENST00000216211 RSPH10BP0C881 870 aa17.26■□□□□ 0.35
UPK3A-201ENST00000216211 CALM1P0DP23 149 aa17.26■□□□□ 0.35
UPK3A-201ENST00000216211 CALM2P0DP24 149 aa17.26■□□□□ 0.35
UPK3A-201ENST00000216211 CALM3P0DP25 149 aa17.26■□□□□ 0.35
UPK3A-201ENST00000216211 HOXC8P31273 242 aa17.26■□□□□ 0.35
UPK3A-201ENST00000216211 THPOP40225 353 aa17.26■□□□□ 0.35
UPK3A-201ENST00000216211 MRPS5P82675 430 aaKnown RBP17.26■□□□□ 0.35
UPK3A-201ENST00000216211 SP4Q02446 784 aa17.26■□□□□ 0.35
UPK3A-201ENST00000216211 IKBKEQ14164 716 aa17.26■□□□□ 0.35
UPK3A-201ENST00000216211 UTP14CQ5TAP6 766 aaKnown RBP17.26■□□□□ 0.35
UPK3A-201ENST00000216211 KRT40Q6A162 431 aa17.26■□□□□ 0.35
UPK3A-201ENST00000216211 CCDC82Q8N4S0 544 aa17.26■□□□□ 0.35
UPK3A-201ENST00000216211 USP26Q9BXU7 913 aa17.26■□□□□ 0.35
UPK3A-201ENST00000216211 RNPEPQ9H4A4 650 aa17.26■□□□□ 0.35
UPK3A-201ENST00000216211 SLC12A7Q9Y666 1083 aa17.26■□□□□ 0.35
UPK3A-201ENST00000216211 TTC28Q96AY4 2481 aa17.25■□□□□ 0.35
UPK3A-201ENST00000216211 LGR5O75473 907 aa17.25■□□□□ 0.35
UPK3A-201ENST00000216211 POU3F3P20264 500 aaPredicted RBP17.25■□□□□ 0.35
UPK3A-201ENST00000216211 UBE2SQ16763 222 aa17.25■□□□□ 0.35
UPK3A-201ENST00000216211 FAM117BQ6P1L5 589 aa17.25■□□□□ 0.35
UPK3A-201ENST00000216211 XRRA1Q6P2D8 792 aa17.25■□□□□ 0.35
UPK3A-201ENST00000216211 NLRX1Q86UT6 975 aa17.25■□□□□ 0.35
UPK3A-201ENST00000216211 TRIM50Q86XT4 487 aa17.25■□□□□ 0.35
UPK3A-201ENST00000216211 TSPYL2Q9H2G4 693 aaPredicted RBP17.25■□□□□ 0.35
UPK3A-201ENST00000216211 PSTPIP2Q9H939 334 aa17.25■□□□□ 0.35
UPK3A-201ENST00000216211 NLRC5Q86WI3 1866 aa17.24■□□□□ 0.35
UPK3A-201ENST00000216211 EMSYQ7Z589 1322 aa17.24■□□□□ 0.35
UPK3A-201ENST00000216211 EFCAB14O75071 495 aa17.24■□□□□ 0.35
UPK3A-201ENST00000216211 GJB5O95377 273 aa17.24■□□□□ 0.35
UPK3A-201ENST00000216211 SKIV2LQ15477 1246 aaKnown RBP17.24■□□□□ 0.35
UPK3A-201ENST00000216211 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.24■□□□□ 0.35
UPK3A-201ENST00000216211 TMTC3Q6ZXV5 915 aa17.24■□□□□ 0.35
UPK3A-201ENST00000216211 MICU3Q86XE3 530 aa17.24■□□□□ 0.35
UPK3A-201ENST00000216211 FANCBQ8NB91 859 aa17.24■□□□□ 0.35
UPK3A-201ENST00000216211 DBF4BQ8NFT6 615 aa17.24■□□□□ 0.35
UPK3A-201ENST00000216211 SENP7Q9BQF6 1050 aa17.24■□□□□ 0.35
UPK3A-201ENST00000216211 SETD4Q9NVD3 440 aa17.24■□□□□ 0.35
UPK3A-201ENST00000216211 TNFRSF10AO00220 468 aa17.23■□□□□ 0.35
UPK3A-201ENST00000216211 ATP9AO75110 1047 aa17.23■□□□□ 0.35
UPK3A-201ENST00000216211 GRB10Q13322 594 aa17.23■□□□□ 0.35
UPK3A-201ENST00000216211 BMP2KLQ5H9B9 411 aa17.23■□□□□ 0.35
UPK3A-201ENST00000216211 SGMS1Q86VZ5 419 aa17.23■□□□□ 0.35
UPK3A-201ENST00000216211 RAD9AQ99638 391 aa17.23■□□□□ 0.35
UPK3A-201ENST00000216211 OSBPL7Q9BZF2 842 aa17.23■□□□□ 0.35
UPK3A-201ENST00000216211 ZNF215Q9UL58 517 aaPredicted RBP17.23■□□□□ 0.35
UPK3A-201ENST00000216211 LOXHD1Q8IVV2 1947 aa17.22■□□□□ 0.35
UPK3A-201ENST00000216211 LPXNO60711 386 aa17.22■□□□□ 0.35
UPK3A-201ENST00000216211 CTSHP09668 335 aa17.22■□□□□ 0.35
UPK3A-201ENST00000216211 GNAT1P11488 350 aa17.22■□□□□ 0.35
UPK3A-201ENST00000216211 KCNA2P16389 499 aa17.22■□□□□ 0.35
UPK3A-201ENST00000216211 TFF2Q03403 129 aa17.22■□□□□ 0.35
UPK3A-201ENST00000216211 HEATR3Q7Z4Q2 680 aa17.22■□□□□ 0.35
UPK3A-201ENST00000216211 IL27Q8NEV9 243 aa17.22■□□□□ 0.35
UPK3A-201ENST00000216211 ADAMTS19Q8TE59 1207 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms