RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 ARRDC4Q8NCT1 418 aa22.83■■□□□ 1.24
RHBDD3-201ENST00000216085 LENG1Q96BZ8 264 aaPredicted RBP22.83■■□□□ 1.24
RHBDD3-201ENST00000216085 PCDHB6Q9Y5E3 794 aa22.83■■□□□ 1.24
RHBDD3-201ENST00000216085 SYNRGQ9UMZ2 1314 aa22.82■■□□□ 1.24
RHBDD3-201ENST00000216085 ADCY6O43306 1168 aa22.82■■□□□ 1.24
RHBDD3-201ENST00000216085 ZEB2O60315 1214 aa22.82■■□□□ 1.24
RHBDD3-201ENST00000216085 C6orf222P0C671 652 aaPredicted RBP22.82■■□□□ 1.24
RHBDD3-201ENST00000216085 GJA9P57773 515 aa22.82■■□□□ 1.24
RHBDD3-201ENST00000216085 SP2Q02086 613 aa22.82■■□□□ 1.24
RHBDD3-201ENST00000216085 U2AF1L4Q8WU68 220 aaKnown RBP22.82■■□□□ 1.24
RHBDD3-201ENST00000216085 COPS5Q92905 334 aa22.82■■□□□ 1.24
RHBDD3-201ENST00000216085 SPATA33Q96N06 139 aa22.82■■□□□ 1.24
RHBDD3-201ENST00000216085 TEKT3Q9BXF9 490 aa22.82■■□□□ 1.24
RHBDD3-201ENST00000216085 KCNMB3Q9NPA1 279 aa22.82■■□□□ 1.24
RHBDD3-201ENST00000216085 ATP9AO75110 1047 aa22.81■■□□□ 1.24
RHBDD3-201ENST00000216085 FARP2O94887 1054 aaPredicted RBP22.81■■□□□ 1.24
RHBDD3-201ENST00000216085 DDIT3P35638 169 aa22.81■■□□□ 1.24
RHBDD3-201ENST00000216085 ARHGAP1Q07960 439 aa22.81■■□□□ 1.24
RHBDD3-201ENST00000216085 GJC2Q5T442 439 aaPredicted RBP22.81■■□□□ 1.24
RHBDD3-201ENST00000216085 LHX8Q68G74 356 aa22.81■■□□□ 1.24
RHBDD3-201ENST00000216085 ETNPPLQ8TBG4 499 aa22.81■■□□□ 1.24
RHBDD3-201ENST00000216085 SLC5A5Q92911 643 aa22.81■■□□□ 1.24
RHBDD3-201ENST00000216085 UPF3AQ9H1J1 476 aaKnown RBP22.81■■□□□ 1.24
RHBDD3-201ENST00000216085 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.81■■□□□ 1.24
RHBDD3-201ENST00000216085 SLC9A2Q9UBY0 812 aa22.81■■□□□ 1.24
RHBDD3-201ENST00000216085 SGPL1O95470 568 aa22.81■■□□□ 1.24
RHBDD3-201ENST00000216085 MYCNP04198 464 aaPredicted RBP22.81■■□□□ 1.24
RHBDD3-201ENST00000216085 OR52Z1P0C646 297 aa22.81■■□□□ 1.24
RHBDD3-201ENST00000216085 KRT76Q01546 638 aa22.81■■□□□ 1.24
RHBDD3-201ENST00000216085 NBR1Q14596 966 aa22.81■■□□□ 1.24
RHBDD3-201ENST00000216085 FSCN1Q16658 493 aaKnown RBP22.81■■□□□ 1.24
RHBDD3-201ENST00000216085 PPTC7Q8NI37 304 aa22.81■■□□□ 1.24
RHBDD3-201ENST00000216085 WNT7AO00755 349 aa22.8■■□□□ 1.24
RHBDD3-201ENST00000216085 PGK1P00558 417 aa22.8■■□□□ 1.24
RHBDD3-201ENST00000216085 TFRCP02786 760 aaKnown RBP22.8■■□□□ 1.24
RHBDD3-201ENST00000216085 GJA8P48165 433 aa22.8■■□□□ 1.24
RHBDD3-201ENST00000216085 ITGB3BPQ13352 177 aaPredicted RBP22.8■■□□□ 1.24
RHBDD3-201ENST00000216085 TMEM266Q2M3C6 531 aa22.8■■□□□ 1.24
RHBDD3-201ENST00000216085 ATL3Q6DD88 541 aa22.8■■□□□ 1.24
RHBDD3-201ENST00000216085 PCSK9Q8NBP7 692 aaKnown RBP22.8■■□□□ 1.24
RHBDD3-201ENST00000216085 ABHD8Q96I13 439 aa22.8■■□□□ 1.24
RHBDD3-201ENST00000216085 SORBS3O60504 671 aa22.79■■□□□ 1.24
RHBDD3-201ENST00000216085 PTGDRQ13258 359 aa22.79■■□□□ 1.24
RHBDD3-201ENST00000216085 TMEM63BQ5T3F8 832 aa22.79■■□□□ 1.24
RHBDD3-201ENST00000216085 CHMP5Q9NZZ3 219 aa22.79■■□□□ 1.24
RHBDD3-201ENST00000216085 OGDHLQ9ULD0 1010 aa22.79■■□□□ 1.24
RHBDD3-201ENST00000216085 KBTBD13C9JR72 458 aa22.78■■□□□ 1.24
RHBDD3-201ENST00000216085 DDX39AO00148 427 aaKnown RBP22.78■■□□□ 1.24
RHBDD3-201ENST00000216085 ADAMTS4O75173 837 aa22.78■■□□□ 1.24
RHBDD3-201ENST00000216085 CST5P28325 142 aaPredicted RBP22.78■■□□□ 1.24
RHBDD3-201ENST00000216085 SP4Q02446 784 aa22.78■■□□□ 1.24
RHBDD3-201ENST00000216085 GNASQ5JWF2 1037 aa22.78■■□□□ 1.24
RHBDD3-201ENST00000216085 ZNF746Q6NUN9 644 aaPredicted RBP22.78■■□□□ 1.24
RHBDD3-201ENST00000216085 SMAP1Q8IYB5 467 aaPredicted RBP22.78■■□□□ 1.24
RHBDD3-201ENST00000216085 AFG1LQ8WV93 481 aa22.78■■□□□ 1.24
RHBDD3-201ENST00000216085 RAB34Q9BZG1 259 aa22.78■■□□□ 1.24
RHBDD3-201ENST00000216085 CFAP45Q9UL16 551 aa22.78■■□□□ 1.24
RHBDD3-201ENST00000216085 PCDHA12Q9UN75 941 aa22.78■■□□□ 1.24
RHBDD3-201ENST00000216085 KPNA6O60684 536 aa22.78■■□□□ 1.24
RHBDD3-201ENST00000216085 NKX3-2P78367 333 aa22.78■■□□□ 1.24
RHBDD3-201ENST00000216085 SF3A1Q15459 793 aaKnown RBP22.78■■□□□ 1.24
RHBDD3-201ENST00000216085 DGKDQ16760 1214 aa22.78■■□□□ 1.24
RHBDD3-201ENST00000216085 FAM173BQ6P4H8 233 aa22.78■■□□□ 1.24
RHBDD3-201ENST00000216085 UIMC1Q96RL1 719 aa22.78■■□□□ 1.24
RHBDD3-201ENST00000216085 CRISPLD2Q9H0B8 497 aa22.78■■□□□ 1.24
RHBDD3-201ENST00000216085 POLR3EQ9NVU0 708 aa22.78■■□□□ 1.24
RHBDD3-201ENST00000216085 ZDHHC9Q9Y397 364 aa22.78■■□□□ 1.24
RHBDD3-201ENST00000216085 SAMM50Q9Y512 469 aa22.78■■□□□ 1.24
RHBDD3-201ENST00000216085 ELP1O95163 1332 aa22.78■■□□□ 1.24
RHBDD3-201ENST00000216085 FRMPD3Q5JV73 1810 aa22.77■■□□□ 1.24
RHBDD3-201ENST00000216085 A6NJR5 290 aa22.77■■□□□ 1.24
RHBDD3-201ENST00000216085 DNM1LO00429 736 aa22.77■■□□□ 1.24
RHBDD3-201ENST00000216085 DHX15O43143 795 aaKnown RBP22.77■■□□□ 1.24
RHBDD3-201ENST00000216085 PSMD10O75832 226 aa22.77■■□□□ 1.24
RHBDD3-201ENST00000216085 SFNP31947 248 aa22.77■■□□□ 1.24
RHBDD3-201ENST00000216085 PRPHP41219 470 aa22.77■■□□□ 1.24
RHBDD3-201ENST00000216085 TXKP42681 527 aa22.77■■□□□ 1.24
RHBDD3-201ENST00000216085 JAK3P52333 1124 aa22.77■■□□□ 1.24
RHBDD3-201ENST00000216085 LRRC41Q15345 812 aa22.77■■□□□ 1.24
RHBDD3-201ENST00000216085 ANKLE1Q8NAG6 615 aa22.77■■□□□ 1.24
RHBDD3-201ENST00000216085 HAS1Q92839 578 aa22.77■■□□□ 1.24
RHBDD3-201ENST00000216085 MTMR9Q96QG7 549 aa22.77■■□□□ 1.24
RHBDD3-201ENST00000216085 TTC12Q9H892 705 aaPredicted RBP22.77■■□□□ 1.24
RHBDD3-201ENST00000216085 WDR64B1ANS9 1081 aa22.76■■□□□ 1.23
RHBDD3-201ENST00000216085 MMP3P08254 477 aa22.76■■□□□ 1.23
RHBDD3-201ENST00000216085 ATP2C1P98194 919 aaPredicted RBP22.76■■□□□ 1.23
RHBDD3-201ENST00000216085 HSDL1Q3SXM5 330 aa22.76■■□□□ 1.23
RHBDD3-201ENST00000216085 FOXD4L6Q3SYB3 417 aaPredicted RBP22.76■■□□□ 1.23
RHBDD3-201ENST00000216085 FOXD4L3Q6VB84 417 aaPredicted RBP22.76■■□□□ 1.23
RHBDD3-201ENST00000216085 SEPT1Q8WYJ6 367 aa22.76■■□□□ 1.23
RHBDD3-201ENST00000216085 TSEN34Q9BSV6 310 aaKnown RBP22.76■■□□□ 1.23
RHBDD3-201ENST00000216085 TMEM60Q9H2L4 133 aa22.76■■□□□ 1.23
RHBDD3-201ENST00000216085 PPFIA4O75335 1185 aa22.76■■□□□ 1.23
RHBDD3-201ENST00000216085 ACTR2P61160 394 aa22.76■■□□□ 1.23
RHBDD3-201ENST00000216085 ARL6IP4Q66PJ3 421 aaKnown RBP22.76■■□□□ 1.23
RHBDD3-201ENST00000216085 MIS18BP1Q6P0N0 1132 aa22.76■■□□□ 1.23
RHBDD3-201ENST00000216085 RDM1Q8NG50 284 aa22.76■■□□□ 1.23
RHBDD3-201ENST00000216085 GPR20Q99678 358 aa22.76■■□□□ 1.23
RHBDD3-201ENST00000216085 KIAA0100Q14667 2235 aaKnown RBP22.75■■□□□ 1.23
RHBDD3-201ENST00000216085 MOXD2PA6NHM9 499 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms