RNA–Protein interactions for RNA: ENST00000173898.11

TRO-201, Transcript of trophinin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRO, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-201ENST00000173898 LRRC8CQ8TDW0 803 aa13.05□□□□□ -0.32
TRO-201ENST00000173898 MED10Q9BTT4 135 aa13.05□□□□□ -0.32
TRO-201ENST00000173898 QTRT2Q9H974 415 aaKnown RBP13.05□□□□□ -0.32
TRO-201ENST00000173898 NCAPD2Q15021 1401 aa13.04□□□□□ -0.32
TRO-201ENST00000173898 KIF1BO60333 1816 aa13.04□□□□□ -0.32
TRO-201ENST00000173898 POTEMA6NI47 508 aa13.04□□□□□ -0.32
TRO-201ENST00000173898 MRPS25P82663 173 aaKnown RBP13.04□□□□□ -0.32
TRO-201ENST00000173898 FAM160B1Q5W0V3 765 aa13.04□□□□□ -0.32
TRO-201ENST00000173898 TOGARAM2Q6ZUX3 1019 aa13.04□□□□□ -0.32
TRO-201ENST00000173898 PHLDB2Q86SQ0 1253 aa13.04□□□□□ -0.32
TRO-201ENST00000173898 SULF1Q8IWU6 871 aa13.04□□□□□ -0.32
TRO-201ENST00000173898 PBKQ96KB5 322 aa13.04□□□□□ -0.32
TRO-201ENST00000173898 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.04□□□□□ -0.32
TRO-201ENST00000173898 TRPC5Q9UL62 973 aaPredicted RBP13.04□□□□□ -0.32
TRO-201ENST00000173898 RIPOR2Q9Y4F9 1068 aa13.04□□□□□ -0.32
TRO-201ENST00000173898 SPATA31A3Q5VYP0 1347 aa13.04□□□□□ -0.32
TRO-201ENST00000173898 SFI1A8K8P3 1242 aa13.04□□□□□ -0.32
TRO-201ENST00000173898 GOLGA8SH3BPF8 625 aa13.04□□□□□ -0.32
TRO-201ENST00000173898 NT5C2P49902 561 aa13.04□□□□□ -0.32
TRO-201ENST00000173898 SCARF1Q14162 830 aa13.04□□□□□ -0.32
TRO-201ENST00000173898 NME8Q8N427 588 aa13.04□□□□□ -0.32
TRO-201ENST00000173898 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.04□□□□□ -0.32
TRO-201ENST00000173898 NUF2Q9BZD4 464 aa13.04□□□□□ -0.32
TRO-201ENST00000173898 DCP1AQ9NPI6 582 aaPredicted RBP13.04□□□□□ -0.32
TRO-201ENST00000173898 SH3GLB2Q9NR46 395 aa13.04□□□□□ -0.32
TRO-201ENST00000173898 SGK1O00141 431 aa13.04□□□□□ -0.32
TRO-201ENST00000173898 CTNND1O60716 968 aaKnown RBP13.04□□□□□ -0.32
TRO-201ENST00000173898 SUN1O94901 812 aa13.04□□□□□ -0.32
TRO-201ENST00000173898 CTTNQ14247 550 aaKnown RBP13.04□□□□□ -0.32
TRO-201ENST00000173898 ZKSCAN8Q15776 578 aaPredicted RBP13.04□□□□□ -0.32
TRO-201ENST00000173898 SESTD1Q86VW0 696 aa13.04□□□□□ -0.32
TRO-201ENST00000173898 FOXP4Q8IVH2 680 aaPredicted RBP13.04□□□□□ -0.32
TRO-201ENST00000173898 TRIM11Q96F44 468 aa13.04□□□□□ -0.32
TRO-201ENST00000173898 WDR19Q8NEZ3 1342 aa13.04□□□□□ -0.32
TRO-201ENST00000173898 SYNJ2BP-COX16A0A087WUM0 186 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 LGALS16A8MUM7 142 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 ECEL1O95672 775 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 PRCPP42785 496 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 SLCO1A2P46721 670 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 NNTQ13423 1086 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 UNC13DQ70J99 1090 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 MIGA2Q7L4E1 593 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 CELF1Q92879 486 aaKnown RBP13.03□□□□□ -0.32
TRO-201ENST00000173898 EXOC4Q96A65 974 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 CFAP57Q96MR6 1250 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 COX16Q9P0S2 106 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 ABCC3O15438 1527 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 DDIT3P35638 169 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 MAP2K2P36507 400 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 CACNB3P54284 484 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 SNAP25P60880 206 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 DMTNQ08495 405 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 BRINP3Q76B58 766 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 RPUSD2Q8IZ73 545 aaKnown RBP13.03□□□□□ -0.32
TRO-201ENST00000173898 CCDC197Q8NCU1 140 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 AP1M1Q9BXS5 423 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 OSBPL5Q9H0X9 879 aaPredicted RBP13.03□□□□□ -0.32
TRO-201ENST00000173898 SEPT10Q9P0V9 454 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 CFAP74Q9C0B2 1584 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 PREX2Q70Z35 1606 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 GSG1L2A8MUP6 293 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 TFAMQ00059 246 aaKnown RBP13.03□□□□□ -0.32
TRO-201ENST00000173898 KCTD2Q14681 263 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 C10orf76Q5T2E6 689 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 VCXQ9H320 206 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.03□□□□□ -0.32
TRO-201ENST00000173898 UBN2Q6ZU65 1347 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 ARAP3Q8WWN8 1544 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 USP17L5A8MUK1 530 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 INHBAP08476 426 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 HSPA6P17066 643 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 IL9RQ01113 521 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 ALX1Q15699 326 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 TSGA10IPQ3SY00 556 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 PDZD4Q76G19 769 aaPredicted RBP13.03□□□□□ -0.32
TRO-201ENST00000173898 FAM149B1Q96BN6 582 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 RAB3IPQ96QF0 476 aaPredicted RBP13.03□□□□□ -0.32
TRO-201ENST00000173898 ISCA1Q9BUE6 129 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 COA1Q9GZY4 146 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 ABHD10Q9NUJ1 306 aa13.03□□□□□ -0.32
TRO-201ENST00000173898 RRP15Q9Y3B9 282 aaKnown RBP13.03□□□□□ -0.32
TRO-201ENST00000173898 EIF2AK2P19525 551 aaKnown RBP13.02□□□□□ -0.32
TRO-201ENST00000173898 NAA30Q147X3 362 aaPredicted RBP13.02□□□□□ -0.32
TRO-201ENST00000173898 PHLDB3Q6NSJ2 640 aa13.02□□□□□ -0.32
TRO-201ENST00000173898 PPP4R3CPQ6ZMV5 832 aa13.02□□□□□ -0.32
TRO-201ENST00000173898 STOX1Q6ZVD7 989 aa13.02□□□□□ -0.32
TRO-201ENST00000173898 MTA3Q9BTC8 594 aa13.02□□□□□ -0.32
TRO-201ENST00000173898 SPC25Q9HBM1 224 aa13.02□□□□□ -0.32
TRO-201ENST00000173898 SLC5A4Q9NY91 659 aa13.02□□□□□ -0.32
TRO-201ENST00000173898 RPS6KA2Q15349 733 aa13.02□□□□□ -0.33
TRO-201ENST00000173898 PIGOQ8TEQ8 1089 aa13.02□□□□□ -0.33
TRO-201ENST00000173898 EFCC1Q9HA90 598 aa13.02□□□□□ -0.33
TRO-201ENST00000173898 NXF1Q9UBU9 619 aaKnown RBP13.02□□□□□ -0.33
TRO-201ENST00000173898 VGLL3A8MV65 326 aa13.02□□□□□ -0.33
TRO-201ENST00000173898 RPS6KA4O75676 772 aa13.02□□□□□ -0.33
TRO-201ENST00000173898 SAT1P21673 171 aa13.02□□□□□ -0.33
TRO-201ENST00000173898 HOXA7P31268 230 aaPredicted RBP13.02□□□□□ -0.33
TRO-201ENST00000173898 IFRD2Q12894 506 aaPredicted RBP13.02□□□□□ -0.33
TRO-201ENST00000173898 APOL6Q9BWW8 343 aa13.02□□□□□ -0.33
TRO-201ENST00000173898 NBPF26B4DH59 902 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms