RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 ZNF577Q9BSK1 485 aa13.67□□□□□ -0.22
SYPL1-201ENST00000011473 PCDH10Q9P2E7 1040 aa13.67□□□□□ -0.22
SYPL1-201ENST00000011473 KIAA1217Q5T5P2 1943 aa13.66□□□□□ -0.22
SYPL1-201ENST00000011473 A0A1W2PQ45 241 aaPredicted RBP13.66□□□□□ -0.22
SYPL1-201ENST00000011473 A0A1W2PQY0 241 aa13.66□□□□□ -0.22
SYPL1-201ENST00000011473 A6NJR5 290 aa13.66□□□□□ -0.22
SYPL1-201ENST00000011473 MSH4O15457 936 aa13.66□□□□□ -0.22
SYPL1-201ENST00000011473 MYL3P08590 195 aa13.66□□□□□ -0.22
SYPL1-201ENST00000011473 ZNF286BP0CG31 522 aa13.66□□□□□ -0.22
SYPL1-201ENST00000011473 U2AF2P26368 475 aaKnown RBP eCLIP13.66□□□□□ -0.22
SYPL1-201ENST00000011473 CST5P28325 142 aaPredicted RBP13.66□□□□□ -0.22
SYPL1-201ENST00000011473 CPT1AP50416 773 aa13.66□□□□□ -0.22
SYPL1-201ENST00000011473 SETQ01105 290 aaPredicted RBP13.66□□□□□ -0.22
SYPL1-201ENST00000011473 METTL7BQ6UX53 244 aa13.66□□□□□ -0.22
SYPL1-201ENST00000011473 POTEDQ86YR6 584 aa13.66□□□□□ -0.22
SYPL1-201ENST00000011473 ANKLE1Q8NAG6 615 aa13.66□□□□□ -0.22
SYPL1-201ENST00000011473 PPTC7Q8NI37 304 aa13.66□□□□□ -0.22
SYPL1-201ENST00000011473 SENP7Q9BQF6 1050 aa13.66□□□□□ -0.22
SYPL1-201ENST00000011473 C11orf49Q9H6J7 331 aa13.66□□□□□ -0.22
SYPL1-201ENST00000011473 MYH7BA7E2Y1 1941 aa13.66□□□□□ -0.22
SYPL1-201ENST00000011473 CYP3A7-CYP3A51PA0A087WV96 503 aa13.66□□□□□ -0.22
SYPL1-201ENST00000011473 NOP56O00567 594 aaKnown RBP13.66□□□□□ -0.22
SYPL1-201ENST00000011473 MAFGO15525 162 aa13.66□□□□□ -0.22
SYPL1-201ENST00000011473 COL6A1P12109 1028 aa13.66□□□□□ -0.22
SYPL1-201ENST00000011473 CYP3A7P24462 503 aa13.66□□□□□ -0.22
SYPL1-201ENST00000011473 PSMC6P62333 389 aa13.66□□□□□ -0.22
SYPL1-201ENST00000011473 NIPA1Q7RTP0 329 aa13.66□□□□□ -0.22
SYPL1-201ENST00000011473 NECAB2Q7Z6G3 386 aa13.66□□□□□ -0.22
SYPL1-201ENST00000011473 EMID1Q96A84 441 aaPredicted RBP13.66□□□□□ -0.22
SYPL1-201ENST00000011473 VTI1AQ96AJ9 217 aa13.66□□□□□ -0.22
SYPL1-201ENST00000011473 JPH1Q9HDC5 661 aaPredicted RBP13.66□□□□□ -0.22
SYPL1-201ENST00000011473 TNRC18O15417 2968 aaPredicted RBP13.65□□□□□ -0.22
SYPL1-201ENST00000011473 DHX15O43143 795 aaKnown RBP13.65□□□□□ -0.22
SYPL1-201ENST00000011473 MCM7P33993 719 aa13.65□□□□□ -0.22
SYPL1-201ENST00000011473 NKX3-2P78367 333 aa13.65□□□□□ -0.22
SYPL1-201ENST00000011473 PURAQ00577 322 aaKnown RBP13.65□□□□□ -0.22
SYPL1-201ENST00000011473 PKP1Q13835 747 aa13.65□□□□□ -0.22
SYPL1-201ENST00000011473 Q4G0T1 1027 aa13.65□□□□□ -0.22
SYPL1-201ENST00000011473 FOXD4L5Q5VV16 416 aaPredicted RBP13.65□□□□□ -0.22
SYPL1-201ENST00000011473 PPP4R3AQ6IN85 833 aa13.65□□□□□ -0.22
SYPL1-201ENST00000011473 TRIM50Q86XT4 487 aa13.65□□□□□ -0.22
SYPL1-201ENST00000011473 PCSK9Q8NBP7 692 aaKnown RBP13.65□□□□□ -0.22
SYPL1-201ENST00000011473 FOXD4L4Q8WXT5 416 aaPredicted RBP13.65□□□□□ -0.22
SYPL1-201ENST00000011473 GPR20Q99678 358 aa13.65□□□□□ -0.22
SYPL1-201ENST00000011473 SDF4Q9BRK5 362 aa13.65□□□□□ -0.22
SYPL1-201ENST00000011473 CCNE2O96020 404 aa13.64□□□□□ -0.23
SYPL1-201ENST00000011473 PDCP20941 246 aa13.64□□□□□ -0.23
SYPL1-201ENST00000011473 TOB1P50616 345 aaPredicted RBP13.64□□□□□ -0.23
SYPL1-201ENST00000011473 ETNPPLQ8TBG4 499 aa13.64□□□□□ -0.23
SYPL1-201ENST00000011473 MBOAT7Q96N66 472 aa13.64□□□□□ -0.23
SYPL1-201ENST00000011473 STARD7Q9NQZ5 370 aa13.64□□□□□ -0.23
SYPL1-201ENST00000011473 SLC9A2Q9UBY0 812 aa13.64□□□□□ -0.23
SYPL1-201ENST00000011473 PHF24Q9UPV7 400 aa13.64□□□□□ -0.23
SYPL1-201ENST00000011473 MOXD2PA6NHM9 499 aa13.64□□□□□ -0.23
SYPL1-201ENST00000011473 CHMP2AO43633 222 aa13.64□□□□□ -0.23
SYPL1-201ENST00000011473 STX6O43752 255 aa13.64□□□□□ -0.23
SYPL1-201ENST00000011473 BECN1Q14457 450 aa13.64□□□□□ -0.23
SYPL1-201ENST00000011473 ZNF174Q15697 407 aa13.64□□□□□ -0.23
SYPL1-201ENST00000011473 DGKDQ16760 1214 aa13.64□□□□□ -0.23
SYPL1-201ENST00000011473 BRDTQ58F21 947 aaPredicted RBP13.64□□□□□ -0.23
SYPL1-201ENST00000011473 UTP14CQ5TAP6 766 aaKnown RBP13.64□□□□□ -0.23
SYPL1-201ENST00000011473 FAM173BQ6P4H8 233 aa13.64□□□□□ -0.23
SYPL1-201ENST00000011473 GLT1D1Q96MS3 346 aa13.64□□□□□ -0.23
SYPL1-201ENST00000011473 MTMR6Q9Y217 621 aa13.64□□□□□ -0.23
SYPL1-201ENST00000011473 ZEB2O60315 1214 aa13.63□□□□□ -0.23
SYPL1-201ENST00000011473 TCF7P36402 384 aaPredicted RBP13.63□□□□□ -0.23
SYPL1-201ENST00000011473 LRRC26Q2I0M4 334 aa13.63□□□□□ -0.23
SYPL1-201ENST00000011473 LRCH2Q5VUJ6 765 aa13.63□□□□□ -0.23
SYPL1-201ENST00000011473 MOXD1Q6UVY6 613 aa13.63□□□□□ -0.23
SYPL1-201ENST00000011473 GIMAP8Q8ND71 665 aaPredicted RBP13.63□□□□□ -0.23
SYPL1-201ENST00000011473 HAS1Q92839 578 aa13.63□□□□□ -0.23
SYPL1-201ENST00000011473 TSEN34Q9BSV6 310 aaKnown RBP13.63□□□□□ -0.23
SYPL1-201ENST00000011473 TMEM60Q9H2L4 133 aa13.63□□□□□ -0.23
SYPL1-201ENST00000011473 PCDHB6Q9Y5E3 794 aa13.63□□□□□ -0.23
SYPL1-201ENST00000011473 GSTTP1A0A1W2PQM5 241 aa13.63□□□□□ -0.23
SYPL1-201ENST00000011473 NEMFO60524 1076 aa13.63□□□□□ -0.23
SYPL1-201ENST00000011473 GAS7O60861 476 aa13.63□□□□□ -0.23
SYPL1-201ENST00000011473 GCFC2P16383 781 aaKnown RBP13.63□□□□□ -0.23
SYPL1-201ENST00000011473 ACTR2P61160 394 aa13.63□□□□□ -0.23
SYPL1-201ENST00000011473 TTC38Q5R3I4 469 aa13.63□□□□□ -0.23
SYPL1-201ENST00000011473 KAT2BQ92831 832 aa13.63□□□□□ -0.23
SYPL1-201ENST00000011473 SLC5A5Q92911 643 aa13.63□□□□□ -0.23
SYPL1-201ENST00000011473 KCNMB3Q9NPA1 279 aa13.63□□□□□ -0.23
SYPL1-201ENST00000011473 GRIN2DO15399 1336 aa13.63□□□□□ -0.23
SYPL1-201ENST00000011473 NFASCO94856 1347 aa13.63□□□□□ -0.23
SYPL1-201ENST00000011473 DOCK5Q9H7D0 1870 aa13.62□□□□□ -0.23
SYPL1-201ENST00000011473 PPFIA4O75335 1185 aa13.62□□□□□ -0.23
SYPL1-201ENST00000011473 LGALS2P05162 132 aa13.62□□□□□ -0.23
SYPL1-201ENST00000011473 C16orf70Q9BSU1 422 aa13.62□□□□□ -0.23
SYPL1-201ENST00000011473 MARCH6O60337 910 aa13.61□□□□□ -0.23
SYPL1-201ENST00000011473 PSMD10O75832 226 aa13.61□□□□□ -0.23
SYPL1-201ENST00000011473 MARK3P27448 753 aa13.61□□□□□ -0.23
SYPL1-201ENST00000011473 CALCRLQ16602 461 aa13.61□□□□□ -0.23
SYPL1-201ENST00000011473 SLC39A5Q6ZMH5 540 aa13.61□□□□□ -0.23
SYPL1-201ENST00000011473 TRMT1LQ7Z2T5 733 aaKnown RBP13.61□□□□□ -0.23
SYPL1-201ENST00000011473 SEPT1Q8WYJ6 367 aa13.61□□□□□ -0.23
SYPL1-201ENST00000011473 MTG1Q9BT17 334 aaPredicted RBP13.61□□□□□ -0.23
SYPL1-201ENST00000011473 UNC45AQ9H3U1 944 aa13.61□□□□□ -0.23
SYPL1-201ENST00000011473 TBC1D22BQ9NU19 505 aa13.61□□□□□ -0.23
SYPL1-201ENST00000011473 POLR3EQ9NVU0 708 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms