RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 1700109H08RikQ9D9C0 210 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Casp14O89094 257 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Casp2P29594 452 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Pnma5Q5DTT8 618 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Washc1Q8VDD8 475 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Ppil4Q9CXG3 492 aaKnown RBP12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Telo2Q9DC40 840 aaKnown RBP12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Gm4297D3YWB7 211 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Pgrmc1O55022 195 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 LdhbP16125 334 aaKnown RBP12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Tsta3P23591 321 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Runx2Q08775 607 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Fam183bQ5NC57 135 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Slc9a1Q61165 820 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Gja3Q64448 417 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Brd2Q7JJ13 798 aaKnown RBP12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Ccdc50Q810U5 305 aaKnown RBP12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Leng8Q8CBY3 785 aaKnown RBP12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 BlvraQ9CY64 295 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Atp10aO54827 1508 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Glt1d1A4FUP9 346 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Mms22lB1AUR6 1238 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Clrn2B2RVW2 232 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Acad12D3Z7X0 555 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Pde4aO89084 844 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Thumpd3P97770 505 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Ppp1r13lQ5I1X5 824 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Dnph1Q80VJ3 173 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 P3h4Q8K2B0 443 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Eps8l2Q99K30 729 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 ErmapQ9JLN5 566 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Rabgef1Q9JM13 491 aa12.66□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Kctd10Q922M3 315 aa12.65□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Dnaaf1Q9D2H9 634 aa12.65□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Arhgef10lA2AWP8 1280 aa12.65□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Rgs9O54828 675 aa12.65□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Snx12O70493 165 aa12.65□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Cdh15P33146 784 aa12.65□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Q6PD19 689 aa12.65□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Sh2b1Q91ZM2 756 aa12.65□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Dpp7Q9ET22 506 aa12.65□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Dach1Q9QYB2 751 aa12.65□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Dnaaf5B9EJR8 853 aa12.65□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Ccdc110Q3V125 848 aa12.65□□□□□ -0.38
Ndc1-204ENSMUST00000139560 AsnsQ61024 561 aa12.65□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Ppp2r5aQ6PD03 486 aa12.65□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Lyve1Q8BHC0 318 aa12.65□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Gtpbp10Q8K013 366 aa12.65□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Dnajc3Q91YW3 504 aa12.65□□□□□ -0.38
Ndc1-204ENSMUST00000139560 IydQ9DCX8 285 aa12.65□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Sgk1Q9WVC6 431 aa12.65□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Zbtb12Q9Z150 459 aa12.65□□□□□ -0.38
Ndc1-204ENSMUST00000139560 Mmrn1B2RPV6 1210 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Axin2O88566 840 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 CopeO89079 308 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Krt18P05784 423 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Ftl1P29391 183 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Ppp1r37Q8BKR5 712 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Osbpl2Q8BX94 484 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Slc13a1Q9JHI4 594 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Tex21Q9R0U9 575 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Lrriq1Q0P5X1 1673 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Esr2O08537 530 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Adcy7P51829 1099 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Sesn2P58043 480 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Kmt5aQ2YDW7 349 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Srek1ip1Q4V9W2 153 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Rgl1Q60695 768 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Wdr91Q7TMQ7 748 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Sik3Q6P4S6 1311 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Gm7356A0A087WSA6 508 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Cfap221A9Q751 836 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Cyth3O08967 399 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Sema4dO09126 861 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 SftpbP50405 377 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 DSCC1Q14AI0 399 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Ica1lQ3TY65 431 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Slc2a13Q3UHK1 637 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Gm5168Q4KL04 211 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 DeptorQ570Y9 409 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Hoxa13Q62424 386 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Rab34Q64008 259 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Galnt17Q7TT15 598 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Lrrc1Q80VQ1 524 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Ankfy1Q810B6 1169 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Q8BWG4 1187 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Pcsk1nQ9QXV0 258 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Tcp11x2A2AEI7 503 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 MeiocA2AG06 965 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Olfr310B2RVZ1 332 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Speer4f2E9Q366 295 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Ect2Q07139 913 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 SpertQ32MG2 446 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Ice2Q3UZ18 988 aaKnown RBP12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Kiaa0319Q5SZV5 1081 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Glra4Q61603 456 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Ptpn14Q62130 1189 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Sh3gl1Q62419 368 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 WaplQ65Z40 1200 aaKnown RBP12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 OcrlQ6NVF0 900 aa12.64□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms