RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Prg3Q9JL95 222 aa9.62□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Slit2Q9R1B9 1521 aa9.62□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Ugt1a8D3Z748 530 aa9.62□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Ugt1a10E9PXN7 530 aa9.62□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Lipo1J3QME6 396 aa9.62□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Art2aP17981 287 aa9.62□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Traf5P70191 558 aa9.62□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Cyb5d1Q5NCY3 228 aa9.62□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Bank1Q80VH0 783 aa9.62□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Suds3Q8BR65 328 aa9.62□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Defb15Q8R2I5 79 aa9.62□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Capn9Q9D805 690 aa9.62□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Pkd2l2Q9JLG4 621 aa9.62□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Net1Q9Z206 595 aa9.62□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Scgb2b11A0A087WR49 112 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Fbxl16A2RT62 479 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Stk10O55098 966 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 XlrP05531 208 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 LdhaP06151 332 aaKnown RBP9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Xrcc6P23475 608 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 CebpaP53566 359 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Llgl2Q3TJ91 1027 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Prl2c1Q5SVL9 228 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Bicd1Q8BR07 835 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Spice1Q8C804 860 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 NemfQ8CCP0 1064 aaKnown RBP9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Kcnq3Q8K3F6 873 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Dnajc3Q91YW3 504 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Fam173bQ9D1Z3 247 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Kiaa1468Q148V7 1216 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Gga2Q6P5E6 603 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Ankzf1Q80UU1 748 aaKnown RBP9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Gimap7Q8R379 293 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 GdaQ9R111 454 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Akr1b10G5E895 316 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Klrk1O54709 232 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Parp1P11103 1013 aaKnown RBP9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Gja5Q01231 358 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 HelqQ2VPA6 1069 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Cacna2d4Q5RJF7 1116 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Lamc2Q61092 1191 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Klra3Q64329 266 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 KaznQ69ZS8 779 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Haus1Q8BHX1 278 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 MtrrQ8C1A3 696 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Fam228aQ8CDW1 299 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Sulf1Q8K007 870 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Slc44a4Q91VA1 707 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Eif4a3Q91VC3 411 aaKnown RBP9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Glrx3Q9CQM9 337 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 2310002L09RikQ9D7L5 217 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Mrps9Q9D7N3 390 aaKnown RBP9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Trmt112Q9DCG9 125 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 RpgrQ9R0X5 1001 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Lrch1P62046 709 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 1700013D24RikQ0P521 120 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Qrich1Q3UA37 777 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 SkiQ60698 725 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 PapolaQ61183 739 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Srrm3Q80WV7 648 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 AarsQ8BGQ7 968 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Riox2Q8CD15 465 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Ccdc91Q9D8L5 442 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Nap1l5Q9JJF0 156 aa9.61□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Akr1c19G3X9Y6 323 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Gnat1P20612 350 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Cap1P40124 474 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Atp8a1P70704 1164 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Grm1P97772 1199 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Pabpn1lQ5XFR0 273 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Arhgef2Q60875 985 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Tsg101Q61187 391 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Mapk4Q6P5G0 583 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Dnph1Q80VJ3 173 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Anapc5Q8BTZ4 740 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Glis2Q8VDL9 521 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Calml3Q9D6P8 149 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Nsmce1Q9D720 266 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Plcb1Q9Z1B3 1216 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Arap3Q8R5G7 1538 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Ect2Q07139 913 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Ccdc174Q3U155 467 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Tll1Q62381 1013 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Krt40Q6IFX3 439 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Tas2r124Q7M718 309 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Olfr119Q7TRJ5 321 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Ireb2Q811J3 963 aaKnown RBP9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Fbxo38Q8BMI0 1194 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Osbpl2Q8BX94 484 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Ces1dQ8VCT4 565 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 NptxrQ99J85 493 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 LpxnQ99N69 386 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Atp6v1e2Q9D593 226 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Q9D5Q8 446 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Kcnq5Q9JK45 933 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Serpinb6cW4VSP4 379 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Wdr19Q3UGF1 1341 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Klc1O88447 541 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Klra9Q2TJJ8 266 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Sec31aQ3UPL0 1230 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms