RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Sgpp1Q9JI99 430 aa13.92□□□□□ -0.18
Trim50-202ENSMUST00000111180 Krt78E9Q0F0 1068 aa13.91□□□□□ -0.18
Trim50-202ENSMUST00000111180 E030030I06RikJ3QML9 246 aa13.91□□□□□ -0.18
Trim50-202ENSMUST00000111180 Guca2bO09051 106 aa13.91□□□□□ -0.18
Trim50-202ENSMUST00000111180 Usp25P57080 1055 aa13.91□□□□□ -0.18
Trim50-202ENSMUST00000111180 Palb2Q3U0P1 1104 aa13.91□□□□□ -0.18
Trim50-202ENSMUST00000111180 Tbc1d30Q69ZT9 766 aa13.91□□□□□ -0.18
Trim50-202ENSMUST00000111180 RragbQ6NTA4 374 aa13.91□□□□□ -0.18
Trim50-202ENSMUST00000111180 GypcQ78HU7 95 aa13.91□□□□□ -0.18
Trim50-202ENSMUST00000111180 Bbs9Q811G0 885 aa13.91□□□□□ -0.18
Trim50-202ENSMUST00000111180 Slc17a8Q8BFU8 601 aa13.91□□□□□ -0.18
Trim50-202ENSMUST00000111180 Nipa1Q8BHK1 323 aa13.91□□□□□ -0.18
Trim50-202ENSMUST00000111180 Cep128Q8BI22 1102 aa13.91□□□□□ -0.18
Trim50-202ENSMUST00000111180 Hsdl1Q8BTX9 330 aa13.91□□□□□ -0.18
Trim50-202ENSMUST00000111180 Yars2Q8BYL4 472 aaKnown RBP13.91□□□□□ -0.18
Trim50-202ENSMUST00000111180 Ago4Q8CJF8 861 aa13.91□□□□□ -0.18
Trim50-202ENSMUST00000111180 Appl2Q8K3G9 662 aa13.91□□□□□ -0.18
Trim50-202ENSMUST00000111180 E2f4Q8R0K9 410 aa13.91□□□□□ -0.18
Trim50-202ENSMUST00000111180 Trub2Q91WG3 331 aaKnown RBP13.91□□□□□ -0.18
Trim50-202ENSMUST00000111180 Rassf3Q99P51 232 aa13.91□□□□□ -0.18
Trim50-202ENSMUST00000111180 Kdm8Q9CXT6 414 aa13.91□□□□□ -0.18
Trim50-202ENSMUST00000111180 Saal1Q9D2C2 474 aa13.91□□□□□ -0.18
Trim50-202ENSMUST00000111180 Znf704Q9ERQ3 566 aa13.91□□□□□ -0.18
Trim50-202ENSMUST00000111180 Pex3Q9QXY9 372 aa13.91□□□□□ -0.18
Trim50-202ENSMUST00000111180 Ccdc173A0JLY1 547 aa13.9□□□□□ -0.18
Trim50-202ENSMUST00000111180 Klhl34A2AI76 644 aa13.9□□□□□ -0.18
Trim50-202ENSMUST00000111180 Cfap73J3QPZ5 306 aa13.9□□□□□ -0.18
Trim50-202ENSMUST00000111180 Barx2O08686 283 aa13.9□□□□□ -0.18
Trim50-202ENSMUST00000111180 SfnO70456 248 aaKnown RBP13.9□□□□□ -0.18
Trim50-202ENSMUST00000111180 Il4rP16382 810 aa13.9□□□□□ -0.18
Trim50-202ENSMUST00000111180 RarbP22605 482 aa13.9□□□□□ -0.18
Trim50-202ENSMUST00000111180 Pik3r1P26450 724 aa13.9□□□□□ -0.18
Trim50-202ENSMUST00000111180 Neurl1bQ0MW30 546 aa13.9□□□□□ -0.18
Trim50-202ENSMUST00000111180 Fdxacb1Q3UY23 622 aa13.9□□□□□ -0.18
Trim50-202ENSMUST00000111180 4933416C03RikQ3V063 378 aa13.9□□□□□ -0.18
Trim50-202ENSMUST00000111180 Zbtb7bQ64321 544 aa13.9□□□□□ -0.18
Trim50-202ENSMUST00000111180 Skiv2lQ6NZR5 1244 aa13.9□□□□□ -0.18
Trim50-202ENSMUST00000111180 Q8C5S3 137 aa13.9□□□□□ -0.18
Trim50-202ENSMUST00000111180 Pde5aQ8CG03 865 aa13.9□□□□□ -0.18
Trim50-202ENSMUST00000111180 Fermt2Q8CIB5 680 aa13.9□□□□□ -0.18
Trim50-202ENSMUST00000111180 Lrrc56Q8K375 552 aa13.9□□□□□ -0.18
Trim50-202ENSMUST00000111180 Add3Q9QYB5 706 aaKnown RBP13.9□□□□□ -0.18
Trim50-202ENSMUST00000111180 Twf2Q9Z0P5 349 aaKnown RBP13.9□□□□□ -0.18
Trim50-202ENSMUST00000111180 Gm44511A0A0N4SW10 223 aa13.89□□□□□ -0.19
Trim50-202ENSMUST00000111180 Gm4758L7N258 96 aa13.89□□□□□ -0.19
Trim50-202ENSMUST00000111180 Klrb1bP27812 223 aa13.89□□□□□ -0.19
Trim50-202ENSMUST00000111180 Polr3gQ6NXY9 223 aa13.89□□□□□ -0.19
Trim50-202ENSMUST00000111180 P2ry10Q8BFU7 328 aa13.89□□□□□ -0.19
Trim50-202ENSMUST00000111180 Arhgef19Q8BWA8 802 aa13.89□□□□□ -0.19
Trim50-202ENSMUST00000111180 Pgm5Q8BZF8 567 aa13.89□□□□□ -0.19
Trim50-202ENSMUST00000111180 CnstQ8CBC4 711 aa13.89□□□□□ -0.19
Trim50-202ENSMUST00000111180 Vmn1r203Q8R273 311 aa13.89□□□□□ -0.19
Trim50-202ENSMUST00000111180 Krt79Q8VED5 531 aa13.89□□□□□ -0.19
Trim50-202ENSMUST00000111180 Pcdhgc5Q91XW9 944 aa13.89□□□□□ -0.19
Trim50-202ENSMUST00000111180 Syt17Q920M7 470 aa13.89□□□□□ -0.19
Trim50-202ENSMUST00000111180 Cndp2Q9D1A2 475 aaKnown RBP13.89□□□□□ -0.19
Trim50-202ENSMUST00000111180 Lamb2Q61292 1799 aa13.89□□□□□ -0.19
Trim50-202ENSMUST00000111180 Kmt2eQ3UG20 1868 aa13.89□□□□□ -0.19
Trim50-202ENSMUST00000111180 Kntc1Q8C3Y4 2207 aa13.89□□□□□ -0.19
Trim50-202ENSMUST00000111180 Astn1Q61137 1302 aa13.88□□□□□ -0.19
Trim50-202ENSMUST00000111180 Atp8b5A3FIN4 1183 aa13.88□□□□□ -0.19
Trim50-202ENSMUST00000111180 Itgb5O70309 798 aa13.88□□□□□ -0.19
Trim50-202ENSMUST00000111180 Slc7a1Q09143 622 aa13.88□□□□□ -0.19
Trim50-202ENSMUST00000111180 4933427I04RikQ3V053 235 aa13.88□□□□□ -0.19
Trim50-202ENSMUST00000111180 Lrrc36Q3V0M2 755 aa13.88□□□□□ -0.19
Trim50-202ENSMUST00000111180 Snx13Q6PHS6 957 aa13.88□□□□□ -0.19
Trim50-202ENSMUST00000111180 Tmem132dQ76HP3 1097 aa13.88□□□□□ -0.19
Trim50-202ENSMUST00000111180 Luc7l2Q7TNC4 392 aaKnown RBP13.88□□□□□ -0.19
Trim50-202ENSMUST00000111180 Znf618Q80YY7 953 aaKnown RBP13.88□□□□□ -0.19
Trim50-202ENSMUST00000111180 Fam126bQ8C729 530 aa13.88□□□□□ -0.19
Trim50-202ENSMUST00000111180 Adgrg2Q8CJ12 1009 aa13.88□□□□□ -0.19
Trim50-202ENSMUST00000111180 CrygnQ8VHL5 183 aa13.88□□□□□ -0.19
Trim50-202ENSMUST00000111180 Npm3Q9CPP0 175 aaKnown RBP13.88□□□□□ -0.19
Trim50-202ENSMUST00000111180 CluhQ5SW19 1315 aa13.87□□□□□ -0.19
Trim50-202ENSMUST00000111180 Akr1c19G3X9Y6 323 aa13.87□□□□□ -0.19
Trim50-202ENSMUST00000111180 NfkbieO54910 364 aa13.87□□□□□ -0.19
Trim50-202ENSMUST00000111180 Trdmt1O55055 415 aa13.87□□□□□ -0.19
Trim50-202ENSMUST00000111180 DcxO88809 366 aa13.87□□□□□ -0.19
Trim50-202ENSMUST00000111180 Msh3P13705 1091 aa13.87□□□□□ -0.19
Trim50-202ENSMUST00000111180 GlrbP48168 496 aa13.87□□□□□ -0.19
Trim50-202ENSMUST00000111180 Tdo2P48776 406 aa13.87□□□□□ -0.19
Trim50-202ENSMUST00000111180 Ccdc162pQ0VG85 912 aa13.87□□□□□ -0.19
Trim50-202ENSMUST00000111180 Eepd1Q3TGW2 569 aa13.87□□□□□ -0.19
Trim50-202ENSMUST00000111180 Meis1Q60954 390 aa13.87□□□□□ -0.19
Trim50-202ENSMUST00000111180 Rrp12Q6P5B0 1295 aaKnown RBP13.87□□□□□ -0.19
Trim50-202ENSMUST00000111180 Gpc2Q8BKV1 579 aa13.87□□□□□ -0.19
Trim50-202ENSMUST00000111180 Ccdc122Q8BVN0 290 aa13.87□□□□□ -0.19
Trim50-202ENSMUST00000111180 Btbd7Q8CFE5 1130 aa13.87□□□□□ -0.19
Trim50-202ENSMUST00000111180 Defb19Q8K3I8 83 aa13.87□□□□□ -0.19
Trim50-202ENSMUST00000111180 Luzp1Q8R4U7 1068 aaKnown RBP13.87□□□□□ -0.19
Trim50-202ENSMUST00000111180 Rhobtb2Q91V93 728 aa13.87□□□□□ -0.19
Trim50-202ENSMUST00000111180 Q91WD4 421 aa13.87□□□□□ -0.19
Trim50-202ENSMUST00000111180 Large1Q9Z1M7 756 aa13.87□□□□□ -0.19
Trim50-202ENSMUST00000111180 PfasQ5SUR0 1337 aa13.87□□□□□ -0.19
Trim50-202ENSMUST00000111180 Sbno2Q7TNB8 1349 aa13.87□□□□□ -0.19
Trim50-202ENSMUST00000111180 Pgap3A2A559 320 aa13.87□□□□□ -0.19
Trim50-202ENSMUST00000111180 Gm10436L7N1Y3 520 aa13.87□□□□□ -0.19
Trim50-202ENSMUST00000111180 Irs1P35569 1233 aa13.87□□□□□ -0.19
Trim50-202ENSMUST00000111180 Rbp3P49194 1234 aa13.87□□□□□ -0.19
Trim50-202ENSMUST00000111180 Hoxc13P50207 328 aa13.87□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms