RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Atp9aO70228 1047 aa10.6□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Akr1b7P21300 316 aa10.6□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Crnkl1P63154 690 aaKnown RBP10.6□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Gbp1Q01514 589 aa10.6□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Itih3Q61704 889 aa10.6□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Mb21d2Q8C525 428 aa10.6□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Tomm20lQ9D4V6 152 aa10.6□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Foxp4Q9DBY0 795 aaKnown RBP10.6□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 IkbipQ9DBZ1 373 aa10.6□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 IcmtQ9EQK7 283 aa10.6□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Mapk8ip1Q9WVI9 707 aa10.6□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Parp14Q2EMV9 1817 aa10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Lmnb1P14733 588 aaKnown RBP10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Btg3P50615 252 aa10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Mthfd1lQ3V3R1 977 aaKnown RBP10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Pde1aQ61481 565 aa10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Nlrp14Q6B966 993 aa10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Bend3Q6PAL0 825 aa10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Cnksr2Q80YA9 1032 aa10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Pih1h3bQ8C6P5 218 aa10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Enox2Q8R0Z2 598 aa10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Q99KU6 348 aa10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Grtp1Q9D3N8 359 aa10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Noc2lQ9WV70 747 aaKnown RBP10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 CpdO89001 1377 aa10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Tbc1d25A1A5B6 742 aa10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Gm7361D3Z6R1 267 aa10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Vmn2r23E9PXI5 849 aa10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Ampd3O08739 766 aa10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Gsta1P13745 223 aa10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Cyp2d11P24457 504 aa10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Nat2P50295 290 aa10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Pa2g4P50580 394 aaKnown RBP10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Olfm3P63056 478 aa10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Sema3eP70275 775 aa10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Krt14Q61781 484 aa10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Tgfb1i1Q62219 461 aa10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Nlrp9cQ66X01 1004 aa10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Gsta1Q6P8Q0 223 aa10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Lin52Q8CD94 116 aa10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Snx8Q8CFD4 459 aa10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Trim68Q8K243 485 aa10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Zbtb44Q8R0A2 453 aa10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Utp6Q8VCY6 597 aaKnown RBP10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Ubxn11Q9D572 484 aa10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Adam23Q9R1V7 829 aa10.59□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Ptpn23Q6PB44 1692 aa10.58□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Gm45837F7D3W5 961 aa10.58□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Cyp2d34L7N463 504 aa10.58□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 SrprbP47758 269 aa10.58□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Rufy4Q3TYX8 563 aa10.58□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Tspyl3Q3UYP3 334 aa10.58□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Spata24Q6P926 205 aa10.58□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Tmem59lQ7TNI2 337 aa10.58□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Ces1fQ91WU0 561 aa10.58□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Pde2aQ922S4 916 aa10.58□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 ArpinQ9D0A3 226 aa10.58□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 IgtpQ9DCE9 423 aa10.58□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 HnrnpcQ9Z204 313 aaKnown RBP10.58□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Ecm29Q6PDI5 1840 aa10.58□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Myh4Q5SX39 1939 aa10.58□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Myh1Q5SX40 1942 aa10.58□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Fam171a1A2ATK9 892 aa10.58□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Ddx23D3Z0M9 819 aaKnown RBP10.58□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Il1rapl1P59823 695 aa10.58□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Syne3Q4FZC9 975 aa10.58□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Ksr1Q61097 873 aa10.58□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Lilrb4Q64281 335 aa10.58□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Cdc14aQ6GQT0 603 aa10.58□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Cfap206Q6PE87 622 aa10.58□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Osbpl6Q8BXR9 959 aa10.58□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 ImmtQ8CAQ8 757 aaKnown RBP10.58□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Arhgef3Q91X46 524 aa10.58□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 CutaQ9CQ89 177 aa10.58□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Setd6Q9CWY3 473 aa10.58□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Tmem192Q9CXT7 266 aa10.58□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Prpf40aQ9R1C7 953 aaKnown RBP10.58□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Mzf1S4R1L6 814 aa10.58□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Astn2Q80Z10 1352 aa10.58□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Pus7B7ZNL8 666 aaKnown RBP10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Vmn2r72D3Z4N8 856 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Ugt1a8D3Z748 530 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Ugt1a10E9PXN7 530 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Pak1O88643 545 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 XlrP05531 208 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Eif4a2P10630 407 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 D1Pas1P16381 660 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Grin1P35438 938 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Epb41l4aP52963 686 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Fermt1P59113 677 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Esyt2Q3TZZ7 845 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Ddb1Q3U1J4 1140 aaKnown RBP10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 P2rx3Q3UR32 397 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Olfml2bQ3V1G4 746 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Pex1Q5BL07 1284 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 SpdyaQ5IBH7 310 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Krt77Q6IFZ6 572 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Asic3Q6X1Y6 530 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Tpcn2Q8BWC0 731 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Angel1Q8VCU0 667 aa10.57□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms