RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Iqcb1Q8BP00 598 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Psmd2Q8VDM4 908 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Serpina3iD3Z450 408 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Acad12D3Z7X0 555 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Cyth2P63034 400 aaKnown RBP10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Zc3h18Q0P678 948 aaKnown RBP10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Trim43aQ3TL54 445 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Pcdhb14Q6PB90 796 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Vmn1r199Q8R280 367 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Prpf6Q91YR7 941 aaKnown RBP10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Znf608Q56A10 1511 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Casp8O89110 480 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 LbrQ3U9G9 626 aaKnown RBP10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Rgl1Q60695 768 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Nlrp4fQ66X05 959 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Tcp10aQ80W76 438 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Anapc5Q8BTZ4 740 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Orc1Q9Z1N2 840 aaKnown RBP10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Miga1Q4QQM5 600 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 GypcQ78HU7 95 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Actn1Q7TPR4 892 aaKnown RBP10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Lyve1Q8BHC0 318 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Ces1Q8VCC2 565 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Ranbp17Q99NF8 1088 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Rgs22G3UYX5 1258 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Nacc1Q7TSZ8 514 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 RubcnQ80U62 956 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Ankrd13aQ80UP5 588 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Tex21Q9R0U9 575 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Tcp10bE9PYJ0 438 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 MagohP61327 146 aaKnown RBP10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Gm4981Q3ULJ8 291 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Ckap2lQ7TS74 745 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Mb21d2Q8C525 428 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 P3h4Q8K2B0 443 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 EpgnQ924X1 152 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 MagohbQ9CQL1 146 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Creld2Q9CYA0 350 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Caln1Q9JJG7 219 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Flot1O08917 428 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 HelqQ2VPA6 1069 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Srek1ip1Q4V9W2 153 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Trpc6Q61143 930 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Irak1Q62406 710 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 NfrkbQ6PIJ4 1296 aaKnown RBP10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Arhgap29Q8CGF1 1266 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Tada3Q8R0L9 432 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Pomgnt1Q91X88 660 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 TbcbQ9D1E6 244 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Tspan17Q9D7W4 270 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Ddx25Q9QY15 484 aa10.11□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Gimap9G3X987 291 aa10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Irx2P81066 474 aa10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Cage1Q5IR70 849 aa10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 TwistnbQ78WZ7 330 aaKnown RBP10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Usp8Q80U87 1080 aa10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Catsper1Q91ZR5 686 aa10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Snx24Q9CRB0 169 aa10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Trmt44Q9D2Q2 713 aa10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Myo3bQ1EG27 1305 aa10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Phldb3E9QAF4 648 aa10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Serpinb8O08800 374 aaKnown RBP10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Stat4P42228 749 aa10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Kcnf1Q7TSH7 493 aa10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Slc4a7Q8BTY2 1034 aa10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Tarbp1E9Q368 1579 aa10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Rusc2Q80U22 1514 aa10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Sec31aQ3UPL0 1230 aaKnown RBP10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Hipk4Q3V016 616 aa10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Ccdc84Q4VA36 332 aaKnown RBP10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Ube2oQ6ZPJ3 1288 aa10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Spats2lQ91WJ7 558 aaKnown RBP10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Lrrc59Q922Q8 307 aaKnown RBP10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Ckap2Q3V1H1 664 aa10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Ncoa4Q5U4H9 625 aa10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Glra4Q61603 456 aa10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Recql4Q75NR7 1216 aaKnown RBP10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Ccdc159Q8C963 411 aa10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Slc26a6Q8CIW6 758 aa10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Zmym1Q3TJB1 983 aa10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 PapolaQ61183 739 aa10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 GnptabQ69ZN6 1235 aa10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 CcnyQ8BGU5 341 aa10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Dot1lQ6XZL8 1540 aa10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Ess2O70279 479 aa10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Sept2P42208 361 aaKnown RBP10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Sycp3P70281 254 aa10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Sult1d1Q3UZZ6 295 aa10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Ddx3yQ62095 658 aaKnown RBP10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Rbm15bQ6PHZ5 887 aaKnown RBP10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Brd2Q7JJ13 798 aaKnown RBP10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 RgmbQ7TQ33 436 aa10.1□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Tnip3A0A1D5RMN0 279 aa10.09□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 MlxipQ2VPU4 917 aa10.09□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Acot6Q32Q92 419 aa10.09□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Satb1Q60611 764 aa10.09□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Q80ZQ3 298 aa10.09□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 ArpinQ9D0A3 226 aa10.09□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Popdc2Q9ES82 367 aa10.09□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Rims1Q99NE5 1463 aa10.09□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms