RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Vmn2r79E9Q067 851 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Vmn2r78K7N6U5 853 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Cpsf2O35218 782 aaKnown RBP12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 RubcnlQ3TD16 648 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Ankrd13cQ3UX43 541 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 DaglaQ6WQJ1 1044 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Col23a1Q8K4G2 532 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Dnajc17Q91WT4 303 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Fhdc1Q3ULZ2 1149 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Epn1Q80VP1 575 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Adcy3Q8VHH7 1145 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Sept12Q9D451 317 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Ndst4Q9EQW8 872 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 NsfP46460 744 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Rps12P63323 132 aaKnown RBP12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Myo19Q5SV80 963 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Cfap100Q80VN0 613 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Vps37cQ8R105 352 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Taf1dQ9D4V4 322 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Myo1hQ9D6A1 958 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Abcb6Q9DC29 842 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 IdeQ9JHR7 1019 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Gucy1a2F8VQK3 730 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Vmn2r71L7N2D8 855 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 D630036H23RikQ3UQD6 204 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Tnni3kQ5GIG6 834 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Tll1Q62381 1013 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Serpina3bQ8BYY9 420 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Dnm3Q8BZ98 863 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Zhx2Q8C0C0 836 aaKnown RBP12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Vmn1r191Q8K4D0 298 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Tnfrsf10bQ9QZM4 381 aa12.94□□□□□ -0.34
Pcif1-201ENSMUST00000041643 CoblQ5NBX1 1337 aaKnown RBP12.93□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Cyp2d9P11714 504 aa12.93□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Sox5P35710 763 aa12.93□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Grm1P97772 1199 aa12.93□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Haus4Q8BFT2 363 aa12.93□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Med15Q924H2 789 aa12.93□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Strn3Q9ERG2 796 aa12.93□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Gfpt2Q9Z2Z9 682 aa12.93□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Arfgef2A2A5R2 1792 aa12.93□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Klhl34A2AI76 644 aa12.93□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Vti1aO89116 217 aa12.93□□□□□ -0.34
Pcif1-201ENSMUST00000041643 LtkP08923 888 aa12.93□□□□□ -0.34
Pcif1-201ENSMUST00000041643 GartQ64737 1010 aa12.93□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Q91WD4 421 aa12.93□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Pidd1Q9ERV7 915 aa12.93□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Gm44503E9PYU5 387 aa12.93□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Stxbp5Q8K400 1152 aaKnown RBP12.93□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Gm1661E9Q963 441 aa12.92□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Gimap9G3X987 291 aa12.92□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Adssl1P28650 457 aa12.92□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Llgl2Q3TJ91 1027 aa12.92□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Clul1Q3ZRW6 464 aa12.92□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Phf23Q8BSN5 401 aa12.92□□□□□ -0.34
Pcif1-201ENSMUST00000041643 StambpQ9CQ26 424 aa12.92□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Tns2Q8CGB6 1400 aa12.92□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Nab2Q61127 525 aa12.92□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Cacna2d2Q6PHS9 1154 aa12.92□□□□□ -0.34
Pcif1-201ENSMUST00000041643 P2ry10Q8BFU7 328 aa12.92□□□□□ -0.34
Pcif1-201ENSMUST00000041643 MbipQ99LQ1 341 aa12.92□□□□□ -0.34
Pcif1-201ENSMUST00000041643 CpdO89001 1377 aa12.92□□□□□ -0.34
Pcif1-201ENSMUST00000041643 SlmapQ3URD3 845 aa12.92□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Mars2Q499X9 586 aaKnown RBP12.92□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Sdad1Q80UZ2 687 aaKnown RBP12.92□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Fam49aQ8BHZ0 323 aa12.92□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Kat14Q8CID0 779 aa12.92□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Nek9Q8K1R7 984 aa12.92□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Apopt1Q9CQW7 192 aa12.92□□□□□ -0.34
Pcif1-201ENSMUST00000041643 PdclQ9DBX2 301 aa12.92□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Enc1O35709 589 aa12.92□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Ubxn2bQ0KL01 331 aa12.92□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Cdc37Q61081 379 aa12.92□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Olfr390Q8VEZ7 311 aa12.92□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Kif5cP28738 956 aaKnown RBP12.92□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Zscan2Q07230 614 aa12.92□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Olfr832Q7TRG9 312 aa12.92□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Micall1Q8BGT6 870 aa12.92□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Thap2Q9D305 217 aa12.92□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Ddx25Q9QY15 484 aa12.92□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Trim55G3X8Y1 545 aa12.91□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Acad11Q80XL6 779 aa12.91□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Rpap2Q8VC34 614 aa12.91□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Phlpp1Q8CHE4 1687 aa12.91□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Dnajc21E9Q8D0 531 aa12.91□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Adamts18Q4VC17 1219 aa12.91□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Dhx40Q6PE54 779 aaKnown RBP12.91□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Trmt2aQ8BNV1 574 aaKnown RBP12.91□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Pak2Q8CIN4 524 aa12.91□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Six6os1Q9CTN5 574 aa12.91□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Kif2aP28740 705 aa12.91□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Samsn1P57725 372 aa12.91□□□□□ -0.34
Pcif1-201ENSMUST00000041643 NeblQ0II04 452 aa12.91□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Nxf2Q4ZGD8 691 aa12.91□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Rpf1Q7TND5 349 aaKnown RBP12.91□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Etf1Q8BWY3 437 aaKnown RBP12.91□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Ints4Q8CIM8 964 aa12.91□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Akr1b8P45377 316 aa12.91□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Gcnt1Q09324 428 aa12.91□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Fgd5Q80UZ0 1219 aa12.91□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms