RNA–Protein interactions for RNA: ENSMUST00000029414.11

Ssr3-201, Transcript of Translocon-associated protein subunit gamma, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-201ENSMUST00000029414 Tmem240B2RWJ3 173 aa9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 R3hdm1E9Q9Q2 1135 aaKnown RBP9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Capn2O08529 700 aa9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Cyp27b1O35084 507 aa9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 P01644 108 aa9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 P01645 108 aa9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 P01646 108 aa9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 P01647 108 aa9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 SrprbP47758 269 aa9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Syce2Q505B8 171 aa9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Gas6Q61592 674 aa9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Grik5Q61626 979 aa9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Mtmr10Q7TPM9 771 aa9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Ppp1r10Q80W00 888 aaKnown RBP9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Cwf19l2Q8BG79 887 aaKnown RBP9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Dnaaf2Q8BPI1 814 aa9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 3830417A13RikQ8BQJ2 303 aa9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Kcnv2Q8CFS6 562 aa9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Rufy2Q8R4C2 606 aa9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Fam114a1Q9D281 569 aa9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 DgkeQ9R1C6 564 aa9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Slc23a4A0A0J9YUX7 615 aa9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Gm10093D3YYI8 482 aa9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Sptbn5F6UCX4 1208 aa9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Hdac1O09106 482 aaKnown RBP9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Atp9aO70228 1047 aa9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 PfkmP47857 780 aaKnown RBP9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Fdxacb1Q3UY23 622 aa9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 4933427I04RikQ3V053 235 aa9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Pla2g4eQ50L42 875 aa9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Ddr2Q62371 854 aa9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Slitrk3Q810B9 980 aa9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Smad3Q8BUN5 425 aa9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Bcas3Q8CCN5 928 aa9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Ces1Q8VCC2 565 aa9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Lrrc2Q8VDB8 371 aa9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 MutyhQ99P21 515 aa9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Rbp7Q9EPC5 134 aa9.05□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Wdr33Q8K4P0 1330 aaKnown RBP9.04□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Lekr1B2RVN1 116 aa9.04□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Erbb2P70424 1256 aa9.04□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Cplx2P84086 134 aa9.04□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Cdkl5Q3UTQ8 938 aa9.04□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Nt5c2Q3V1L4 560 aa9.04□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Znf652Q5DU09 608 aa9.04□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Prdm4Q80V63 803 aa9.04□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Mrps27Q8BK72 415 aaKnown RBP9.04□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Ago4Q8CJF8 861 aa9.04□□□□□ -0.96
Ssr3-201ENSMUST00000029414 AnlnQ8K298 1121 aaKnown RBP9.04□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Arhgap8Q9CXP4 425 aa9.04□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Kcnh7Q9ER47 1195 aa9.04□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Mad1l1Q9WTX8 717 aaKnown RBP9.04□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Phactr2B1AVP0 632 aa9.04□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Kpna6O35345 536 aa9.04□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Sptlc1O35704 473 aa9.04□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Mgat3Q10470 538 aa9.04□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Meis1Q60954 390 aa9.04□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Tfe3Q64092 572 aaKnown RBP9.04□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Gja6Q6S5G4 283 aa9.04□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Tmem132dQ76HP3 1097 aa9.04□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Nxf7Q80SZ6 620 aaKnown RBP9.04□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Crb2Q80YA8 1282 aa9.04□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Appl2Q8K3G9 662 aa9.04□□□□□ -0.96
Ssr3-201ENSMUST00000029414 DutQ8VCG1 200 aaKnown RBP9.04□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Spred2Q924S7 410 aa9.04□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Gon4lQ9DB00 2260 aa9.04□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Zfp853A0A1D5RM95 733 aa9.03□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Cpb1B2RS76 415 aa9.03□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Tmem132bF7BAB2 1078 aa9.03□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Hps5P59438 1126 aa9.03□□□□□ -0.96
Ssr3-201ENSMUST00000029414 DmwdQ08274 665 aa9.03□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Tnni3kQ5GIG6 834 aa9.03□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Ssh1Q76I79 1042 aa9.03□□□□□ -0.96
Ssr3-201ENSMUST00000029414 NcaphQ8C156 731 aa9.03□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Cchcr1Q8K2I2 770 aa9.03□□□□□ -0.96
Ssr3-201ENSMUST00000029414 LlphQ9D945 130 aaKnown RBP9.03□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Smco2Q9DA21 347 aa9.03□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Pold3Q9EQ28 462 aa9.03□□□□□ -0.96
Ssr3-201ENSMUST00000029414 SetQ9EQU5 289 aaKnown RBP9.03□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Szt2A2A9C3 3431 aa9.03□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Xkr5Q5GH66 676 aa9.03□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Ahcyl2Q68FL4 613 aaKnown RBP9.03□□□□□ -0.96
Ssr3-201ENSMUST00000029414 GypcQ78HU7 95 aa9.03□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Ndufb9Q9CQJ8 179 aa9.03□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Atp6ap2Q9CYN9 350 aa9.03□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Extl2Q9ES89 330 aa9.03□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Lypla2Q9WTL7 231 aa9.03□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Ccdc78D3Z5T1 437 aa9.03□□□□□ -0.96
Ssr3-201ENSMUST00000029414 TazI7HJS2 263 aa9.03□□□□□ -0.96
Ssr3-201ENSMUST00000029414 ArP19091 899 aa9.03□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Dpf3P58269 378 aa9.03□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Ppfia3P60469 1194 aa9.03□□□□□ -0.96
Ssr3-201ENSMUST00000029414 P2ry10Q8BFU7 328 aa9.03□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Tnpo1Q8BFY9 898 aaKnown RBP9.03□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Ca12Q8CI85 354 aa9.03□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Tubb6Q922F4 447 aa9.03□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Rufy3Q9D394 469 aa9.03□□□□□ -0.96
Ssr3-201ENSMUST00000029414 Tbkbp1A2A9T0 611 aa9.02□□□□□ -0.97
Ssr3-201ENSMUST00000029414 Gm13941A2AJ38 245 aa9.02□□□□□ -0.97
Ssr3-201ENSMUST00000029414 Zbtb21E9Q444 1094 aa9.02□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 48.8 ms