RNA–Protein interactions for RNA: ENSMUST00000014065.15

Clip3-201, Transcript of CAP-Gly domain-containing linker protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clip3, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3-201ENSMUST00000014065 Nr2f2P43135 414 aa11.32□□□□□ -0.6
Clip3-201ENSMUST00000014065 Eef2P58252 858 aaKnown RBP11.32□□□□□ -0.6
Clip3-201ENSMUST00000014065 Atp8a1P70704 1164 aa11.32□□□□□ -0.6
Clip3-201ENSMUST00000014065 Nhej1Q3KNJ2 295 aa11.32□□□□□ -0.6
Clip3-201ENSMUST00000014065 Usp17leQ7M764 540 aa11.32□□□□□ -0.6
Clip3-201ENSMUST00000014065 Celf4Q7TSY6 486 aa11.32□□□□□ -0.6
Clip3-201ENSMUST00000014065 Znf526Q8BI66 675 aa11.32□□□□□ -0.6
Clip3-201ENSMUST00000014065 Nop9Q8BMC4 636 aaKnown RBP11.32□□□□□ -0.6
Clip3-201ENSMUST00000014065 Bbs7Q8K2G4 715 aa11.32□□□□□ -0.6
Clip3-201ENSMUST00000014065 Msantd4Q91YU3 345 aa11.32□□□□□ -0.6
Clip3-201ENSMUST00000014065 Lrrc57Q9D1G5 239 aa11.32□□□□□ -0.6
Clip3-201ENSMUST00000014065 Lrp2bpQ9D4C6 346 aa11.32□□□□□ -0.6
Clip3-201ENSMUST00000014065 Nxnl2Q9D531 156 aa11.32□□□□□ -0.6
Clip3-201ENSMUST00000014065 LrmdaQ9D9B4 229 aa11.32□□□□□ -0.6
Clip3-201ENSMUST00000014065 Cmtr1Q9DBC3 837 aa11.32□□□□□ -0.6
Clip3-201ENSMUST00000014065 Add1Q9QYC0 735 aaKnown RBP11.32□□□□□ -0.6
Clip3-201ENSMUST00000014065 Tex21Q9R0U9 575 aa11.32□□□□□ -0.6
Clip3-201ENSMUST00000014065 Znfx1Q8R151 1909 aaKnown RBP11.31□□□□□ -0.6
Clip3-201ENSMUST00000014065 Cacna2d1O08532 1103 aa11.31□□□□□ -0.6
Clip3-201ENSMUST00000014065 Stat3P42227 770 aaKnown RBP11.31□□□□□ -0.6
Clip3-201ENSMUST00000014065 Dpcr1Q3TNW5 500 aa11.31□□□□□ -0.6
Clip3-201ENSMUST00000014065 Kctd1Q5M956 257 aa11.31□□□□□ -0.6
Clip3-201ENSMUST00000014065 Git1Q68FF6 770 aa11.31□□□□□ -0.6
Clip3-201ENSMUST00000014065 Olfr832Q7TRG9 312 aa11.31□□□□□ -0.6
Clip3-201ENSMUST00000014065 Calcoco1Q8CGU1 691 aa11.31□□□□□ -0.6
Clip3-201ENSMUST00000014065 Epb41l3Q9WV92 929 aa11.31□□□□□ -0.6
Clip3-201ENSMUST00000014065 Plekhg2Q6KAU7 1340 aa11.31□□□□□ -0.6
Clip3-201ENSMUST00000014065 Btbd18A0A0A6YY25 723 aa11.31□□□□□ -0.6
Clip3-201ENSMUST00000014065 Kcnh2O35219 1162 aa11.31□□□□□ -0.6
Clip3-201ENSMUST00000014065 Slurp2P0DP59 97 aa11.31□□□□□ -0.6
Clip3-201ENSMUST00000014065 Acsbg2Q2XU92 667 aa11.31□□□□□ -0.6
Clip3-201ENSMUST00000014065 Krt14Q61781 484 aa11.31□□□□□ -0.6
Clip3-201ENSMUST00000014065 Sh3gl2Q62420 352 aa11.31□□□□□ -0.6
Clip3-201ENSMUST00000014065 Ces1eQ64176 562 aa11.31□□□□□ -0.6
Clip3-201ENSMUST00000014065 Fam196bQ6GQV1 535 aa11.31□□□□□ -0.6
Clip3-201ENSMUST00000014065 Rint1Q8BZ36 792 aa11.31□□□□□ -0.6
Clip3-201ENSMUST00000014065 Eno4Q8C042 619 aa11.31□□□□□ -0.6
Clip3-201ENSMUST00000014065 BbxQ8VBW5 907 aa11.31□□□□□ -0.6
Clip3-201ENSMUST00000014065 SncbQ91ZZ3 133 aa11.31□□□□□ -0.6
Clip3-201ENSMUST00000014065 MlxiplQ99MZ3 864 aa11.31□□□□□ -0.6
Clip3-201ENSMUST00000014065 Dph6Q9CQ28 267 aa11.31□□□□□ -0.6
Clip3-201ENSMUST00000014065 TbcbQ9D1E6 244 aa11.31□□□□□ -0.6
Clip3-201ENSMUST00000014065 Hyou1Q9JKR6 999 aaKnown RBP11.31□□□□□ -0.6
Clip3-201ENSMUST00000014065 Ankrd2Q9WV06 328 aa11.31□□□□□ -0.6
Clip3-201ENSMUST00000014065 Gm28036V9GXJ1 658 aa11.31□□□□□ -0.6
Clip3-201ENSMUST00000014065 Scn4aQ9ER60 1841 aa11.31□□□□□ -0.6
Clip3-201ENSMUST00000014065 1700017N19RikA0A087WPJ1 469 aa11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 Gm3893E9Q1I1 302 aa11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 Ap1b1O35643 943 aaKnown RBP11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 Cetn3O35648 167 aa11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 PolrmtQ8BKF1 1207 aaKnown RBP11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 Enox2Q8R0Z2 598 aa11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 Dr1Q91WV0 176 aa11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 Q922C1 641 aa11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 Spc24Q9D083 201 aa11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 ArpinQ9D0A3 226 aa11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 Slc12a7Q9WVL3 1083 aa11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 Akap11E9Q777 1895 aa11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 Krt18P05784 423 aa11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 LdhaP06151 332 aaKnown RBP11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 Ercc5P35689 1170 aa11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 NfixP70257 488 aa11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 Irx1P81068 480 aa11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 Fhdc1Q3ULZ2 1149 aa11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 Ttbk2Q3UVR3 1243 aa11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 Igf2bp2Q5SF07 592 aaKnown RBP11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 Lrrcc1Q69ZB0 1026 aa11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 Yars2Q8BYL4 472 aaKnown RBP11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 Ttc22Q8C159 568 aa11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 SltmQ8CH25 1031 aaKnown RBP11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 Cdk17Q8K0D0 523 aa11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 Tbx22Q8K402 517 aa11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 Ddx25Q9QY15 484 aa11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 Entpd5Q9WUZ9 427 aa11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 Myh8P13542 1937 aa11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 Pcif1P59114 706 aa11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 Snap25P60879 206 aa11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 BC051142Q3V0M8 400 aa11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 Haus6Q6NV99 933 aaKnown RBP11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 FtoQ8BGW1 502 aa11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 Tmem179Q8BHH9 233 aa11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 Fam228aQ8CDW1 299 aa11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 H6pdQ8CFX1 789 aa11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 Slc4a8Q8JZR6 1089 aa11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 Tbc1d23Q8K0F1 684 aa11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 Ginm1Q91WR6 327 aa11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 Calr3Q9D9Q6 380 aa11.3□□□□□ -0.6
Clip3-201ENSMUST00000014065 Frmpd4A2AFR3 1320 aa11.29□□□□□ -0.6
Clip3-201ENSMUST00000014065 Bcl9lQ67FY2 1494 aa11.29□□□□□ -0.6
Clip3-201ENSMUST00000014065 Rnaseh1O70338 285 aa11.29□□□□□ -0.6
Clip3-201ENSMUST00000014065 Xirp1O70373 1129 aa11.29□□□□□ -0.6
Clip3-201ENSMUST00000014065 Sstr3P30935 428 aa11.29□□□□□ -0.6
Clip3-201ENSMUST00000014065 MagohP61327 146 aaKnown RBP11.29□□□□□ -0.6
Clip3-201ENSMUST00000014065 Terf1P70371 421 aa11.29□□□□□ -0.6
Clip3-201ENSMUST00000014065 Hdac10Q6P3E7 666 aa11.29□□□□□ -0.6
Clip3-201ENSMUST00000014065 Dpp8Q80YA7 892 aa11.29□□□□□ -0.6
Clip3-201ENSMUST00000014065 BC048507Q80ZS7 89 aa11.29□□□□□ -0.6
Clip3-201ENSMUST00000014065 Tmx4Q8C0L0 335 aa11.29□□□□□ -0.6
Clip3-201ENSMUST00000014065 Synpo2Q91YE8 1087 aaKnown RBP11.29□□□□□ -0.6
Clip3-201ENSMUST00000014065 MagohbQ9CQL1 146 aa11.29□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms