RNA–Protein interactions for RNA: YOR159C

SME1, Transcript of Core Sm protein Sm E, yeastyeast

Gene SME1, Length 285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SME1YOR159C CTF3Q12748 733 aa3.31□□□□□ -1.88
SME1YOR159C CPR1P14832 162 aaKnown RBP3.3□□□□□ -1.88
SME1YOR159C PRD1P25375 712 aa3.3□□□□□ -1.88
SME1YOR159C CBP4P37267 147 aa3.3□□□□□ -1.88
SME1YOR159C TIF5P38431 405 aaKnown RBP3.3□□□□□ -1.88
SME1YOR159C MBB1P39534 108 aa3.3□□□□□ -1.88
SME1YOR159C ERP2P39704 215 aa3.3□□□□□ -1.88
SME1YOR159C MSO1P53604 210 aaKnown RBP3.3□□□□□ -1.88
SME1YOR159C YDR239CQ03780 787 aa3.3□□□□□ -1.88
SME1YOR159C LPD1P09624 499 aaKnown RBP3.29□□□□□ -1.88
SME1YOR159C OCA4P25366 362 aa3.29□□□□□ -1.88
SME1YOR159C FUN19P28003 413 aaPredicted RBP3.29□□□□□ -1.88
SME1YOR159C SWH1P35845 1188 aa3.29□□□□□ -1.88
SME1YOR159C CST26P38226 397 aa3.29□□□□□ -1.88
SME1YOR159C MUM2P38236 366 aa3.29□□□□□ -1.88
SME1YOR159C YHR131CP38835 850 aa3.29□□□□□ -1.88
SME1YOR159C YPI1P43587 155 aa3.29□□□□□ -1.88
SME1YOR159C PET130P47065 347 aa3.29□□□□□ -1.88
SME1YOR159C PDS5Q04264 1277 aa3.29□□□□□ -1.88
SME1YOR159C HNT3Q08702 217 aa3.29□□□□□ -1.88
SME1YOR159C YCL021W-AQ96VH3 125 aa3.29□□□□□ -1.88
SME1YOR159C MRE11P32829 692 aa3.28□□□□□ -1.88
SME1YOR159C MFT1P33441 392 aaKnown RBP3.28□□□□□ -1.88
SME1YOR159C FRE2P36033 711 aa3.28□□□□□ -1.88
SME1YOR159C YBR225WP38321 900 aa3.28□□□□□ -1.88
SME1YOR159C URB2P47108 1174 aa3.28□□□□□ -1.88
SME1YOR159C OCA1P50946 238 aaPredicted RBP3.28□□□□□ -1.88
SME1YOR159C YGL242CP53066 181 aa3.28□□□□□ -1.88
SME1YOR159C PIR3Q03180 325 aa3.28□□□□□ -1.88
SME1YOR159C YDL121CQ07541 149 aa3.28□□□□□ -1.88
SME1YOR159C RKM5Q12367 367 aa3.28□□□□□ -1.88
SME1YOR159C YDL007C-AQ2V2Q0 85 aa3.28□□□□□ -1.88
SME1YOR159C YML133CQ03099 1374 aa3.27□□□□□ -1.89
SME1YOR159C YLL067CQ07888 1374 aa3.27□□□□□ -1.89
SME1YOR159C YLL066CQ99208 1374 aa3.27□□□□□ -1.89
SME1YOR159C RPL31BP0C2H9 113 aaKnown RBP3.27□□□□□ -1.89
SME1YOR159C PMR1P13586 950 aa3.27□□□□□ -1.89
SME1YOR159C MET8P15807 274 aa3.27□□□□□ -1.89
SME1YOR159C BUB3P26449 341 aa3.27□□□□□ -1.89
SME1YOR159C IMP2'P32351 346 aa3.27□□□□□ -1.89
SME1YOR159C MRP4P32902 394 aa3.27□□□□□ -1.89
SME1YOR159C MRPL4P36517 319 aa3.27□□□□□ -1.89
SME1YOR159C MKT1P40850 830 aaKnown RBP3.27□□□□□ -1.89
SME1YOR159C YFL067WP43537 175 aa3.27□□□□□ -1.89
SME1YOR159C ARE2P53629 642 aaKnown RBP3.27□□□□□ -1.89
SME1YOR159C CAF40P53829 373 aa3.27□□□□□ -1.89
SME1YOR159C ADD37Q03233 198 aa3.27□□□□□ -1.89
SME1YOR159C MFB1Q04922 465 aa3.27□□□□□ -1.89
SME1YOR159C KEL3Q08979 651 aaPredicted RBP3.27□□□□□ -1.89
SME1YOR159C SEC39Q12745 709 aa3.27□□□□□ -1.89
SME1YOR159C YRF1-4O13559 1382 aa3.26□□□□□ -1.89
SME1YOR159C LEU4P06208 619 aaKnown RBP3.26□□□□□ -1.89
SME1YOR159C NDI1P32340 513 aa3.26□□□□□ -1.89
SME1YOR159C YEL057CP39983 233 aa3.26□□□□□ -1.89
SME1YOR159C FAU1P40099 211 aa3.26□□□□□ -1.89
SME1YOR159C SYG1P40528 902 aa3.26□□□□□ -1.89
SME1YOR159C MET28P40573 187 aa3.26□□□□□ -1.89
SME1YOR159C TWF1P53250 332 aa3.26□□□□□ -1.89
SME1YOR159C GSC2P40989 1895 aa3.26□□□□□ -1.89
SME1YOR159C CRM1P30822 1084 aaKnown RBP3.25□□□□□ -1.89
SME1YOR159C ATP11P32453 318 aa3.25□□□□□ -1.89
SME1YOR159C SHE10P53075 577 aa3.25□□□□□ -1.89
SME1YOR159C TOP1P04786 769 aa3.24□□□□□ -1.89
SME1YOR159C HIP1P06775 603 aa3.24□□□□□ -1.89
SME1YOR159C RNA14P25298 677 aaKnown RBP3.24□□□□□ -1.89
SME1YOR159C LDB16P25587 256 aa3.24□□□□□ -1.89
SME1YOR159C DEG1P31115 442 aaKnown RBP3.24□□□□□ -1.89
SME1YOR159C ISC1P40015 477 aaKnown RBP3.24□□□□□ -1.89
SME1YOR159C SPO22P40511 975 aa3.24□□□□□ -1.89
SME1YOR159C ARF3P40994 183 aaRIP-Chip data3.24□□□□□ -1.89not detected
SME1YOR159C AVT4P50944 713 aa3.24□□□□□ -1.89
SME1YOR159C YGL108CP53139 140 aa3.24□□□□□ -1.89
SME1YOR159C OGG1P53397 376 aaPredicted RBP3.24□□□□□ -1.89
SME1YOR159C SLG1P54867 378 aa3.24□□□□□ -1.89
SME1YOR159C TIM10P87108 93 aa3.24□□□□□ -1.89
SME1YOR159C SOV1Q04748 898 aa3.24□□□□□ -1.89
SME1YOR159C ATG29Q12092 213 aa3.24□□□□□ -1.89
SME1YOR159C YER078W-AQ3E7A2 54 aa3.24□□□□□ -1.89
SME1YOR159C YAR066WP0CX18 203 aa3.23□□□□□ -1.89
SME1YOR159C YHR214WP0CX19 203 aa3.23□□□□□ -1.89
SME1YOR159C YBL059WP34224 193 aa3.23□□□□□ -1.89
SME1YOR159C CMC1P36064 111 aa3.23□□□□□ -1.89
SME1YOR159C VID24P38263 362 aa3.23□□□□□ -1.89
SME1YOR159C NDT80P38830 627 aa3.23□□□□□ -1.89
SME1YOR159C FAA2P39518 744 aa3.23□□□□□ -1.89
SME1YOR159C POP6P53218 158 aa3.23□□□□□ -1.89
SME1YOR159C HEL2Q05580 639 aaKnown RBP3.23□□□□□ -1.89
SME1YOR159C MRD1Q06106 887 aaKnown RBP3.23□□□□□ -1.89
SME1YOR159C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
SME1YOR159C RIM20Q12033 661 aa3.23□□□□□ -1.89
SME1YOR159C RHO2P06781 192 aa3.22□□□□□ -1.89
SME1YOR159C HEM15P16622 393 aa3.22□□□□□ -1.89
SME1YOR159C YCR100CP25606 316 aa3.22□□□□□ -1.89
SME1YOR159C AFG1P32317 509 aa3.22□□□□□ -1.89
SME1YOR159C GLC7P32598 312 aaKnown RBP3.22□□□□□ -1.89
SME1YOR159C REC114P32841 428 aa3.22□□□□□ -1.89
SME1YOR159C PAD1P33751 242 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
SME1YOR159C PMT1P33775 817 aa3.22□□□□□ -1.89
SME1YOR159C NAT2P37293 288 aa3.22□□□□□ -1.89
SME1YOR159C KEL1P38853 1164 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms