RNA–Protein interactions for RNA: YOR157C

PUP1, Transcript of Beta 2 subunit of the 20S proteasome, yeastyeast

Gene PUP1, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP1YOR157C NMD5P46970 1048 aa7.96□□□□□ -1.14
PUP1YOR157C SHY1P53266 389 aa7.96□□□□□ -1.14
PUP1YOR157C GIP3Q03016 1276 aa7.96□□□□□ -1.14
PUP1YOR157C RIF2Q06208 395 aa7.96□□□□□ -1.14
PUP1YOR157C MLH3Q12083 715 aa7.96□□□□□ -1.14
PUP1YOR157C MDY2Q12285 212 aa7.96□□□□□ -1.14
PUP1YOR157C GPA2P10823 449 aa7.95□□□□□ -1.14
PUP1YOR157C GCD2P12754 651 aaPredicted RBP7.95□□□□□ -1.14
PUP1YOR157C CBF5P33322 483 aaKnown RBP RIP-Chip data7.95□□□□□ -1.14not detected
PUP1YOR157C TUL1P36096 758 aa7.95□□□□□ -1.14
PUP1YOR157C MAL32P38158 584 aa7.95□□□□□ -1.14
PUP1YOR157C YBR062CP38239 180 aa7.95□□□□□ -1.14
PUP1YOR157C IFA38P38286 347 aa7.95□□□□□ -1.14
PUP1YOR157C BZZ1P38822 633 aa7.95□□□□□ -1.14
PUP1YOR157C PKP1P40530 394 aa7.95□□□□□ -1.14
PUP1YOR157C SAE2P46946 345 aa7.95□□□□□ -1.14
PUP1YOR157C GCD14P46959 383 aaPredicted RBP7.95□□□□□ -1.14
PUP1YOR157C TEL2P53038 688 aa7.95□□□□□ -1.14
PUP1YOR157C COG6P53959 839 aa7.95□□□□□ -1.14
PUP1YOR157C CSN9Q03981 162 aa7.95□□□□□ -1.14
PUP1YOR157C MIX14Q04341 121 aa7.95□□□□□ -1.14
PUP1YOR157C COX6P00427 148 aa7.94□□□□□ -1.14
PUP1YOR157C YFR010W-AP0C5N0 62 aa7.94□□□□□ -1.14
PUP1YOR157C STE12P13574 688 aa7.94□□□□□ -1.14
PUP1YOR157C YBR071WP38243 211 aa7.94□□□□□ -1.14
PUP1YOR157C FAD1P38913 306 aa7.94□□□□□ -1.14
PUP1YOR157C RAD17P48581 401 aa7.94□□□□□ -1.14
PUP1YOR157C PLB2Q03674 706 aa7.94□□□□□ -1.14
PUP1YOR157C FAR10Q06001 478 aa7.94□□□□□ -1.14
PUP1YOR157C RUD3Q12234 484 aaKnown RBP7.94□□□□□ -1.14
PUP1YOR157C YPL247CQ12523 523 aa7.94□□□□□ -1.14
PUP1YOR157C Q0144Q9ZZW2 109 aa7.94□□□□□ -1.14
PUP1YOR157C ARD1P07347 238 aaPredicted RBP7.93□□□□□ -1.14
PUP1YOR157C ATS1P31386 333 aa7.93□□□□□ -1.14
PUP1YOR157C MIC19P43594 170 aa7.93□□□□□ -1.14
PUP1YOR157C YGL176CP46945 554 aa7.93□□□□□ -1.14
PUP1YOR157C MSC1Q03104 513 aa7.93□□□□□ -1.14
PUP1YOR157C GIS1Q03833 894 aa7.93□□□□□ -1.14
PUP1YOR157C MUS81Q04149 632 aaPredicted RBP7.93□□□□□ -1.14
PUP1YOR157C HPT1Q04178 221 aaKnown RBP7.93□□□□□ -1.14
PUP1YOR157C URH1Q04179 340 aa7.93□□□□□ -1.14
PUP1YOR157C YLR177WQ06251 628 aa7.93□□□□□ -1.14
PUP1YOR157C VAC14Q06708 880 aa7.93□□□□□ -1.14
PUP1YOR157C MHT1Q12525 324 aa7.93□□□□□ -1.14
PUP1YOR157C Q0010Q9ZZX9 128 aa7.93□□□□□ -1.14
PUP1YOR157C RPB2P08518 1224 aaKnown RBP7.92□□□□□ -1.14
PUP1YOR157C SGV1P23293 657 aaKnown RBP7.92□□□□□ -1.14
PUP1YOR157C RIM1P32445 135 aaKnown RBP7.92□□□□□ -1.14
PUP1YOR157C EMP70P32802 667 aa7.92□□□□□ -1.14
PUP1YOR157C UBC6P33296 250 aaPredicted RBP7.92□□□□□ -1.14
PUP1YOR157C YKR078WP36158 585 aaKnown RBP7.92□□□□□ -1.14
PUP1YOR157C TED1P40533 473 aa7.92□□□□□ -1.14
PUP1YOR157C ALB1P47019 175 aaPredicted RBP7.92□□□□□ -1.14
PUP1YOR157C UPF3P48412 387 aaKnown RBP7.92□□□□□ -1.14
PUP1YOR157C CTR9P89105 1077 aa7.92□□□□□ -1.14
PUP1YOR157C PFA5Q03289 374 aa7.92□□□□□ -1.14
PUP1YOR157C Q0297Q9ZZV8 51 aa7.92□□□□□ -1.14
PUP1YOR157C RPL20AP0CX23 172 aaKnown RBP7.91□□□□□ -1.14
PUP1YOR157C RPL20BP0CX24 172 aaPredicted RBP7.91□□□□□ -1.14
PUP1YOR157C SRV2P17555 526 aaKnown RBP7.91□□□□□ -1.14
PUP1YOR157C GBP2P25555 427 aaKnown RBP RIP-Chip data7.91□□□□□ -1.14not detected
PUP1YOR157C IDH2P28241 369 aaKnown RBP7.91□□□□□ -1.14
PUP1YOR157C ASK1P35734 292 aa7.91□□□□□ -1.14
PUP1YOR157C SAP30P38429 201 aa7.91□□□□□ -1.14
PUP1YOR157C GAT2P40209 560 aa7.91□□□□□ -1.14
PUP1YOR157C ATP22P50273 684 aaPredicted RBP7.91□□□□□ -1.14
PUP1YOR157C MON1P53129 644 aa7.91□□□□□ -1.14
PUP1YOR157C YGR079WP53249 370 aa7.91□□□□□ -1.14
PUP1YOR157C MPA43P53583 542 aaPredicted RBP7.91□□□□□ -1.14
PUP1YOR157C YPL107WQ02873 248 aa7.91□□□□□ -1.14
PUP1YOR157C ESA1Q08649 445 aa7.91□□□□□ -1.14
PUP1YOR157C CHS5Q12114 671 aaKnown RBP7.91□□□□□ -1.14
PUP1YOR157C YOR019WQ99248 730 aa7.91□□□□□ -1.14
PUP1YOR157C BPH1P25356 2167 aa7.91□□□□□ -1.14
PUP1YOR157C MDN1Q12019 4910 aaKnown RBP7.9□□□□□ -1.14
PUP1YOR157C TY2A-LR1P0C2J4 438 aa7.9□□□□□ -1.14
PUP1YOR157C TY2A-FP0CX61 438 aa7.9□□□□□ -1.14
PUP1YOR157C TY2A-GR2P0CX62 438 aa7.9□□□□□ -1.14
PUP1YOR157C SPO16P17122 198 aa7.9□□□□□ -1.14
PUP1YOR157C SLY41P22215 453 aa7.9□□□□□ -1.14
PUP1YOR157C PHO87P25360 923 aa7.9□□□□□ -1.14
PUP1YOR157C TY2A-CP25383 438 aa7.9□□□□□ -1.14
PUP1YOR157C MFT1P33441 392 aaKnown RBP7.9□□□□□ -1.14
PUP1YOR157C GLG1P36143 616 aa7.9□□□□□ -1.14
PUP1YOR157C TDP1P38319 544 aa7.9□□□□□ -1.14
PUP1YOR157C YGP1P38616 354 aaKnown RBP7.9□□□□□ -1.14
PUP1YOR157C SEC28P40509 296 aaKnown RBP7.9□□□□□ -1.14
PUP1YOR157C MNN5P46982 586 aa7.9□□□□□ -1.14
PUP1YOR157C IBD2P53892 351 aa7.9□□□□□ -1.14
PUP1YOR157C TIM10P87108 93 aa7.9□□□□□ -1.14
PUP1YOR157C ATP25Q03153 612 aa7.9□□□□□ -1.14
PUP1YOR157C TY2A-DR2Q03483 438 aa7.9□□□□□ -1.14
PUP1YOR157C SEI1Q06058 285 aa7.9□□□□□ -1.14
PUP1YOR157C YDL211CQ12121 372 aa7.9□□□□□ -1.14
PUP1YOR157C TY2A-BQ12260 438 aa7.9□□□□□ -1.14
PUP1YOR157C TY2A-OR2Q12293 438 aa7.9□□□□□ -1.14
PUP1YOR157C TY2A-DR1Q12392 438 aa7.9□□□□□ -1.14
PUP1YOR157C TY2A-OR1Q12439 438 aa7.9□□□□□ -1.14
PUP1YOR157C TY2A-DR3Q99303 438 aa7.9□□□□□ -1.14
PUP1YOR157C SPT3P06844 337 aa7.89□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms