RNA–Protein interactions for RNA: YLR325C

RPL38, Transcript of Ribosomal 60S subunit protein L38, yeastyeast

Gene RPL38, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL38YLR325C TIM18Q08749 192 aa1.54□□□□□ -2.16
RPL38YLR325C PKH2Q12236 1081 aaKnown RBP1.54□□□□□ -2.16
RPL38YLR325C SEC39Q12745 709 aa1.54□□□□□ -2.16
RPL38YLR325C TOP1P04786 769 aa1.53□□□□□ -2.16
RPL38YLR325C NAT1P12945 854 aaKnown RBP1.53□□□□□ -2.16
RPL38YLR325C MET8P15807 274 aa1.53□□□□□ -2.16
RPL38YLR325C RPI1P23250 407 aaKnown RBP1.53□□□□□ -2.16
RPL38YLR325C PPH22P23595 377 aa1.53□□□□□ -2.16
RPL38YLR325C LSB5P25369 354 aa1.53□□□□□ -2.16
RPL38YLR325C SPB1P25582 841 aaPredicted RBP1.53□□□□□ -2.16
RPL38YLR325C TIP1P27654 210 aaPredicted RBP1.53□□□□□ -2.16
RPL38YLR325C MSG5P38590 489 aa1.53□□□□□ -2.16
RPL38YLR325C MET28P40573 187 aa1.53□□□□□ -2.16
RPL38YLR325C MTM1P53320 366 aa1.53□□□□□ -2.16
RPL38YLR325C MRP51Q02950 344 aa1.53□□□□□ -2.16
RPL38YLR325C YMR027WQ04371 470 aa1.53□□□□□ -2.16
RPL38YLR325C SNX3Q08826 162 aaKnown RBP1.53□□□□□ -2.16
RPL38YLR325C RRD2Q12461 358 aa1.53□□□□□ -2.16
RPL38YLR325C RAD61Q99359 647 aa1.53□□□□□ -2.16
RPL38YLR325C TRP1P00912 224 aa1.52□□□□□ -2.17
RPL38YLR325C RHO2P06781 192 aa1.52□□□□□ -2.17
RPL38YLR325C NFT1P0CE68 1218 aa1.52□□□□□ -2.17
RPL38YLR325C SNT1P25357 1226 aa1.52□□□□□ -2.17
RPL38YLR325C APE2P32454 952 aaKnown RBP1.52□□□□□ -2.17
RPL38YLR325C SPR1P32603 445 aa1.52□□□□□ -2.17
RPL38YLR325C REC114P32841 428 aa1.52□□□□□ -2.17
RPL38YLR325C PRS1P32895 427 aaKnown RBP1.52□□□□□ -2.17
RPL38YLR325C CMC1P36064 111 aa1.52□□□□□ -2.17
RPL38YLR325C SPO22P40511 975 aa1.52□□□□□ -2.17
RPL38YLR325C MDG1P53885 366 aa1.52□□□□□ -2.17
RPL38YLR325C HER2Q03557 464 aa1.52□□□□□ -2.17
RPL38YLR325C TAP42Q04372 366 aa1.52□□□□□ -2.17
RPL38YLR325C HSP31Q04432 237 aa1.52□□□□□ -2.17
RPL38YLR325C MRD1Q06106 887 aaKnown RBP1.52□□□□□ -2.17
RPL38YLR325C RIM20Q12033 661 aa1.52□□□□□ -2.17
RPL38YLR325C YRM1Q12340 786 aa1.52□□□□□ -2.17
RPL38YLR325C TEF1P02994 458 aaKnown RBP1.51□□□□□ -2.17
RPL38YLR325C ARG3P05150 338 aa1.51□□□□□ -2.17
RPL38YLR325C RPL3P14126 387 aaKnown RBP1.51□□□□□ -2.17
RPL38YLR325C OCA4P25366 362 aa1.51□□□□□ -2.17
RPL38YLR325C GPI10P30777 616 aa1.51□□□□□ -2.17
RPL38YLR325C PRP21P32524 280 aaPredicted RBP1.51□□□□□ -2.17
RPL38YLR325C ECM25P32525 599 aa1.51□□□□□ -2.17
RPL38YLR325C VID24P38263 362 aa1.51□□□□□ -2.17
RPL38YLR325C ESL1P40456 1118 aa1.51□□□□□ -2.17
RPL38YLR325C HXT14P42833 540 aa1.51□□□□□ -2.17
RPL38YLR325C ECM27P47144 725 aa1.51□□□□□ -2.17
RPL38YLR325C SSN8P47821 323 aa1.51□□□□□ -2.17
RPL38YLR325C ADA2Q02336 434 aa1.51□□□□□ -2.17
RPL38YLR325C ATG29Q12092 213 aa1.51□□□□□ -2.17
RPL38YLR325C YDL012CQ12489 107 aa1.51□□□□□ -2.17
RPL38YLR325C MUD1P32605 298 aaKnown RBP1.5□□□□□ -2.17
RPL38YLR325C CSE2P33308 149 aa1.5□□□□□ -2.17
RPL38YLR325C NIP100P33420 868 aa1.5□□□□□ -2.17
RPL38YLR325C YBR137WP38276 179 aa1.5□□□□□ -2.17
RPL38YLR325C VHC1P38329 1120 aa1.5□□□□□ -2.17
RPL38YLR325C LYS1P38998 373 aaRIP-Chip data1.5□□□□□ -2.17not detected
RPL38YLR325C HMS2P47175 358 aa1.5□□□□□ -2.17
RPL38YLR325C BRO1P48582 844 aa1.5□□□□□ -2.17
RPL38YLR325C PHB2P50085 310 aa1.5□□□□□ -2.17
RPL38YLR325C TIM10P87108 93 aa1.5□□□□□ -2.17
RPL38YLR325C YLR278CQ05854 1341 aa1.49□□□□□ -2.17
RPL38YLR325C ARG4P04076 463 aaPredicted RBP1.49□□□□□ -2.17
RPL38YLR325C CYC3P06182 269 aa1.49□□□□□ -2.17
RPL38YLR325C GYP6P32806 458 aa1.49□□□□□ -2.17
RPL38YLR325C CCT2P39076 527 aaKnown RBP1.49□□□□□ -2.17
RPL38YLR325C SAS2P40963 338 aa1.49□□□□□ -2.17
RPL38YLR325C TFG2P41896 400 aaPredicted RBP1.49□□□□□ -2.17
RPL38YLR325C SSU1P41930 458 aa1.49□□□□□ -2.17
RPL38YLR325C VTC2P43585 828 aa1.49□□□□□ -2.17
RPL38YLR325C YNR048WP53740 393 aa1.49□□□□□ -2.17
RPL38YLR325C SVL3Q03088 825 aaKnown RBP1.49□□□□□ -2.17
RPL38YLR325C YMR181CQ03231 154 aa1.49□□□□□ -2.17
RPL38YLR325C RSN1Q03516 953 aa1.49□□□□□ -2.17
RPL38YLR325C BET5Q03630 159 aa1.49□□□□□ -2.17
RPL38YLR325C SIL1Q08199 421 aa1.49□□□□□ -2.17
RPL38YLR325C REX4Q08237 289 aa1.49□□□□□ -2.17
RPL38YLR325C HIS4P00815 799 aaKnown RBP1.48□□□□□ -2.17
RPL38YLR325C MET17P06106 444 aa1.48□□□□□ -2.17
RPL38YLR325C SPS4P09937 338 aa1.48□□□□□ -2.17
RPL38YLR325C NAM2P11325 894 aa1.48□□□□□ -2.17
RPL38YLR325C POP5P28005 173 aa1.48□□□□□ -2.17
RPL38YLR325C NUP2P32499 720 aa1.48□□□□□ -2.17
RPL38YLR325C NPL6P32832 435 aa1.48□□□□□ -2.17
RPL38YLR325C KKQ8P36004 724 aa1.48□□□□□ -2.17
RPL38YLR325C MRP21P38175 177 aa1.48□□□□□ -2.17
RPL38YLR325C ARF3P40994 183 aaRIP-Chip data1.48□□□□□ -2.17not detected
RPL38YLR325C NUP116Q02630 1113 aa1.48□□□□□ -2.17
RPL38YLR325C RNY1Q02933 434 aaKnown RBP1.48□□□□□ -2.17
RPL38YLR325C TSA2Q04120 196 aa1.48□□□□□ -2.17
RPL38YLR325C IRC25Q07951 179 aa1.48□□□□□ -2.17
RPL38YLR325C ORT1Q12375 292 aa1.48□□□□□ -2.17
RPL38YLR325C AHC1Q12433 566 aa1.48□□□□□ -2.17
RPL38YLR325C HSP26P15992 214 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
RPL38YLR325C SPO7P18410 259 aa1.47□□□□□ -2.17
RPL38YLR325C CLN1P20437 546 aa1.47□□□□□ -2.17
RPL38YLR325C HXT3P32466 567 aaKnown RBP1.47□□□□□ -2.17
RPL38YLR325C SEC66P33754 206 aa1.47□□□□□ -2.17
RPL38YLR325C HCS1P34243 683 aa1.47□□□□□ -2.17
RPL38YLR325C YHR054CP38780 354 aa1.47□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms