RNA–Protein interactions for RNA: YKR001C

VPS1, Transcript of Dynamin-like GTPase required for vacuolar sorting, yeastyeast

Gene VPS1, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS1YKR001C IRC7P43623 340 aa5.31□□□□□ -1.56
VPS1YKR001C YJL016WP47072 561 aa5.31□□□□□ -1.56
VPS1YKR001C NBP35P52920 328 aa5.31□□□□□ -1.56
VPS1YKR001C AIM14P53109 570 aa5.31□□□□□ -1.56
VPS1YKR001C CPR6P53691 371 aaKnown RBP5.31□□□□□ -1.56
VPS1YKR001C MPP6P53725 186 aaPredicted RBP5.31□□□□□ -1.56
VPS1YKR001C ECM23Q02710 187 aa5.31□□□□□ -1.56
VPS1YKR001C ARL3Q02804 198 aa5.31□□□□□ -1.56
VPS1YKR001C GIS4Q04233 774 aa5.31□□□□□ -1.56
VPS1YKR001C YLR456WQ06199 204 aa5.31□□□□□ -1.56
VPS1YKR001C NUT2Q06213 157 aa5.31□□□□□ -1.56
VPS1YKR001C YLR413WQ06689 675 aa5.31□□□□□ -1.56
VPS1YKR001C RCL1Q08096 367 aaPredicted RBP5.31□□□□□ -1.56
VPS1YKR001C FRE3Q08905 711 aa5.31□□□□□ -1.56
VPS1YKR001C FLC1Q08967 793 aa5.31□□□□□ -1.56
VPS1YKR001C CDC8P00572 216 aa5.3□□□□□ -1.56
VPS1YKR001C MET17P06106 444 aa5.3□□□□□ -1.56
VPS1YKR001C HIS5P07172 385 aa5.3□□□□□ -1.56
VPS1YKR001C ATP1P07251 545 aaKnown RBP5.3□□□□□ -1.56
VPS1YKR001C DST1P07273 309 aa5.3□□□□□ -1.56
VPS1YKR001C COS2P0CX12 379 aa5.3□□□□□ -1.56
VPS1YKR001C COS3P0CX13 379 aa5.3□□□□□ -1.56
VPS1YKR001C MTF2P10849 440 aa5.3□□□□□ -1.56
VPS1YKR001C GAL3P13045 520 aa5.3□□□□□ -1.56
VPS1YKR001C CBS1P14066 229 aa5.3□□□□□ -1.56
VPS1YKR001C RHB1P25378 209 aa5.3□□□□□ -1.56
VPS1YKR001C LAC1P28496 418 aa5.3□□□□□ -1.56
VPS1YKR001C IDH1P28834 360 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
VPS1YKR001C PYC2P32327 1180 aaKnown RBP5.3□□□□□ -1.56
VPS1YKR001C NGG1P32494 702 aa5.3□□□□□ -1.56
VPS1YKR001C SOF1P33750 489 aaKnown RBP5.3□□□□□ -1.56
VPS1YKR001C YOX1P34161 385 aa5.3□□□□□ -1.56
VPS1YKR001C ALY1P36117 915 aa5.3□□□□□ -1.56
VPS1YKR001C RPF2P36160 344 aaKnown RBP5.3□□□□□ -1.56
VPS1YKR001C NCL1P38205 684 aaKnown RBP5.3□□□□□ -1.56
VPS1YKR001C AME1P38313 324 aa5.3□□□□□ -1.56
VPS1YKR001C GTT1P40582 234 aa5.3□□□□□ -1.56
VPS1YKR001C AGP3P43548 558 aa5.3□□□□□ -1.56
VPS1YKR001C DUO1P53168 247 aaKnown RBP5.3□□□□□ -1.56
VPS1YKR001C IMO32P53219 342 aa5.3□□□□□ -1.56
VPS1YKR001C DBP6P53734 629 aaKnown RBP5.3□□□□□ -1.56
VPS1YKR001C EEB1Q02891 456 aa5.3□□□□□ -1.56
VPS1YKR001C MSC3Q05812 728 aa5.3□□□□□ -1.56
VPS1YKR001C BMT6Q12291 365 aa5.3□□□□□ -1.56
VPS1YKR001C YDR262WQ12331 272 aa5.3□□□□□ -1.56
VPS1YKR001C EMP46Q12396 444 aa5.3□□□□□ -1.56
VPS1YKR001C ACC1Q00955 2233 aaKnown RBP5.3□□□□□ -1.56
VPS1YKR001C HAP2P06774 265 aa5.3□□□□□ -1.56
VPS1YKR001C ABF1P14164 731 aa5.3□□□□□ -1.56
VPS1YKR001C PPH22P23595 377 aa5.3□□□□□ -1.56
VPS1YKR001C NDI1P32340 513 aa5.3□□□□□ -1.56
VPS1YKR001C PEX2P32800 271 aa5.3□□□□□ -1.56
VPS1YKR001C NAT2P37293 288 aa5.3□□□□□ -1.56
VPS1YKR001C ECM13P38195 257 aa5.3□□□□□ -1.56
VPS1YKR001C AIM3P38266 947 aaKnown RBP5.3□□□□□ -1.56
VPS1YKR001C AIM18P38884 321 aa5.3□□□□□ -1.56
VPS1YKR001C CYC2P38909 366 aa5.3□□□□□ -1.56
VPS1YKR001C FIG4P42837 879 aa5.3□□□□□ -1.56
VPS1YKR001C MRX6P48564 524 aa5.3□□□□□ -1.56
VPS1YKR001C NBP1P52919 319 aaPredicted RBP5.3□□□□□ -1.56
VPS1YKR001C UFD1P53044 361 aa5.3□□□□□ -1.56
VPS1YKR001C DID2P69771 204 aa5.3□□□□□ -1.56
VPS1YKR001C CTF19Q02732 369 aa5.3□□□□□ -1.56
VPS1YKR001C LEE1Q02799 301 aaKnown RBP5.3□□□□□ -1.56
VPS1YKR001C NAN1Q02931 896 aaKnown RBP5.3□□□□□ -1.56
VPS1YKR001C PRM15Q03262 622 aa5.3□□□□□ -1.56
VPS1YKR001C OST6Q03723 332 aa5.3□□□□□ -1.56
VPS1YKR001C ATC1Q04005 294 aa5.3□□□□□ -1.56
VPS1YKR001C SOV1Q04748 898 aa5.3□□□□□ -1.56
VPS1YKR001C NGL1Q08213 363 aaKnown RBP5.3□□□□□ -1.56
VPS1YKR001C AGC1Q12482 902 aa5.3□□□□□ -1.56
VPS1YKR001C CKA1P15790 372 aa5.29□□□□□ -1.56
VPS1YKR001C SLY1P22213 666 aa5.29□□□□□ -1.56
VPS1YKR001C AMS1P22855 1083 aa5.29□□□□□ -1.56
VPS1YKR001C GSY1P23337 708 aa5.29□□□□□ -1.56
VPS1YKR001C AGP1P25376 633 aa5.29□□□□□ -1.56
VPS1YKR001C SGF29P25554 259 aa5.29□□□□□ -1.56
VPS1YKR001C SSE2P32590 693 aaKnown RBP5.29□□□□□ -1.56
VPS1YKR001C SRB2P34162 210 aa5.29□□□□□ -1.56
VPS1YKR001C YBP1P38315 674 aa5.29□□□□□ -1.56
VPS1YKR001C VMA7P39111 118 aa5.29□□□□□ -1.56
VPS1YKR001C SEC72P39742 193 aaKnown RBP5.29□□□□□ -1.56
VPS1YKR001C COS4P43542 379 aa5.29□□□□□ -1.56
VPS1YKR001C CAF16P43569 289 aa5.29□□□□□ -1.56
VPS1YKR001C SIP4P46954 829 aa5.29□□□□□ -1.56
VPS1YKR001C COS5P47187 383 aa5.29□□□□□ -1.56
VPS1YKR001C COS1P53822 381 aa5.29□□□□□ -1.56
VPS1YKR001C YPL080CQ02826 108 aa5.29□□□□□ -1.56
VPS1YKR001C RTK1Q12100 620 aaPredicted RBP5.29□□□□□ -1.56
VPS1YKR001C MCM16Q12262 181 aa5.29□□□□□ -1.56
VPS1YKR001C DGK1Q12382 290 aa5.29□□□□□ -1.56
VPS1YKR001C MRPL23Q12487 163 aaPredicted RBP5.29□□□□□ -1.56
VPS1YKR001C WIP1Q2V2P8 89 aa5.29□□□□□ -1.56
VPS1YKR001C IRA2P19158 3079 aa5.29□□□□□ -1.56
VPS1YKR001C COX4P04037 155 aa5.29□□□□□ -1.56
VPS1YKR001C INO1P11986 533 aa5.29□□□□□ -1.56
VPS1YKR001C TOP3P13099 656 aa5.29□□□□□ -1.56
VPS1YKR001C JEN1P36035 616 aa5.29□□□□□ -1.56
VPS1YKR001C YBR259WP38338 688 aa5.29□□□□□ -1.56
VPS1YKR001C YHR112CP38716 378 aa5.29□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms