RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W ALG1P16661 449 aa3.85□□□□□ -1.79
CTK1YKL139W MGR1P25573 417 aa3.85□□□□□ -1.79
CTK1YKL139W ACH1P32316 526 aa3.85□□□□□ -1.79
CTK1YKL139W APE2P32454 952 aaKnown RBP3.85□□□□□ -1.79
CTK1YKL139W RAD24P32641 659 aa3.85□□□□□ -1.79
CTK1YKL139W ECM15P35195 104 aa3.85□□□□□ -1.79
CTK1YKL139W CSM2P40465 213 aa3.85□□□□□ -1.79
CTK1YKL139W TRS85P46944 698 aa3.85□□□□□ -1.79
CTK1YKL139W PHO86P46956 311 aa3.85□□□□□ -1.79
CTK1YKL139W GPI8P49018 411 aa3.85□□□□□ -1.79
CTK1YKL139W YIP5P53108 310 aa3.85□□□□□ -1.79
CTK1YKL139W CUE3P53137 624 aaKnown RBP3.85□□□□□ -1.79
CTK1YKL139W PIB2P53191 635 aa3.85□□□□□ -1.79
CTK1YKL139W RIM13Q03792 727 aa3.85□□□□□ -1.79
CTK1YKL139W SEG1Q04279 960 aa3.85□□□□□ -1.79
CTK1YKL139W YMR087WQ04299 284 aa3.85□□□□□ -1.79
CTK1YKL139W THI7Q05998 598 aa3.85□□□□□ -1.79
CTK1YKL139W NDL1Q06568 189 aa3.85□□□□□ -1.79
CTK1YKL139W AIM17P23180 465 aaKnown RBP3.85□□□□□ -1.79
CTK1YKL139W VPS17P32913 551 aa3.85□□□□□ -1.79
CTK1YKL139W RRP1P35178 278 aaPredicted RBP3.85□□□□□ -1.79
CTK1YKL139W OLA1P38219 394 aaKnown RBP3.85□□□□□ -1.79
CTK1YKL139W GPI16P38875 610 aa3.85□□□□□ -1.79
CTK1YKL139W XBP1P40489 647 aa3.85□□□□□ -1.79
CTK1YKL139W PSA1P41940 361 aaKnown RBP3.85□□□□□ -1.79
CTK1YKL139W ROG1P53118 685 aa3.85□□□□□ -1.79
CTK1YKL139W PCP1P53259 346 aa3.85□□□□□ -1.79
CTK1YKL139W PDR16P53860 351 aaKnown RBP3.85□□□□□ -1.79
CTK1YKL139W TDA7P53882 636 aaPredicted RBP3.85□□□□□ -1.79
CTK1YKL139W ADA2Q02336 434 aa3.85□□□□□ -1.79
CTK1YKL139W YFH1Q07540 174 aa3.85□□□□□ -1.79
CTK1YKL139W LSP1Q12230 341 aaKnown RBP3.85□□□□□ -1.79
CTK1YKL139W MDM10P18409 493 aa3.84□□□□□ -1.8
CTK1YKL139W SEC62P21825 274 aa3.84□□□□□ -1.8
CTK1YKL139W UBA1P22515 1024 aaKnown RBP3.84□□□□□ -1.8
CTK1YKL139W PHO91P27514 894 aa3.84□□□□□ -1.8
CTK1YKL139W FAA1P30624 700 aaKnown RBP3.84□□□□□ -1.8
CTK1YKL139W ECM25P32525 599 aa3.84□□□□□ -1.8
CTK1YKL139W STN1P38960 494 aa3.84□□□□□ -1.8
CTK1YKL139W VPS52P39904 641 aa3.84□□□□□ -1.8
CTK1YKL139W YNR068CP53754 272 aa3.84□□□□□ -1.8
CTK1YKL139W AQR1P53943 586 aa3.84□□□□□ -1.8
CTK1YKL139W BET4Q00618 327 aa3.84□□□□□ -1.8
CTK1YKL139W BNA5Q05979 453 aa3.84□□□□□ -1.8
CTK1YKL139W SPH1Q06160 661 aa3.84□□□□□ -1.8
CTK1YKL139W YNL162W-AQ3E7A8 72 aa3.84□□□□□ -1.8
CTK1YKL139W YPT1P01123 206 aaKnown RBP3.83□□□□□ -1.8
CTK1YKL139W SMY1P32364 656 aaKnown RBP3.83□□□□□ -1.8
CTK1YKL139W NIP1P32497 812 aaKnown RBP3.83□□□□□ -1.8
CTK1YKL139W MNL1P38888 796 aa3.83□□□□□ -1.8
CTK1YKL139W PCF11P39081 626 aaPredicted RBP3.83□□□□□ -1.8
CTK1YKL139W ISC1P40015 477 aaKnown RBP3.83□□□□□ -1.8
CTK1YKL139W PCL6P40038 420 aa3.83□□□□□ -1.8
CTK1YKL139W GAT2P40209 560 aa3.83□□□□□ -1.8
CTK1YKL139W MEP1P40260 492 aa3.83□□□□□ -1.8
CTK1YKL139W YIL089WP40500 205 aa3.83□□□□□ -1.8
CTK1YKL139W SHE4P51534 789 aa3.83□□□□□ -1.8
CTK1YKL139W YGL082WP53155 381 aa3.83□□□□□ -1.8
CTK1YKL139W YNL143CP53908 130 aa3.83□□□□□ -1.8
CTK1YKL139W GIP3Q03016 1276 aa3.83□□□□□ -1.8
CTK1YKL139W YDR541CQ03049 344 aa3.83□□□□□ -1.8
CTK1YKL139W RBA50Q04418 439 aa3.83□□□□□ -1.8
CTK1YKL139W BUG1Q12191 341 aa3.83□□□□□ -1.8
CTK1YKL139W AMD1P15274 810 aaKnown RBP3.82□□□□□ -1.8
CTK1YKL139W YCP4P25349 247 aaKnown RBP3.82□□□□□ -1.8
CTK1YKL139W HSP104P31539 908 aaKnown RBP3.82□□□□□ -1.8
CTK1YKL139W ERG1P32476 496 aaKnown RBP3.82□□□□□ -1.8
CTK1YKL139W MIC60P36112 540 aa3.82□□□□□ -1.8
CTK1YKL139W RRF1P38771 230 aa3.82□□□□□ -1.8
CTK1YKL139W YIR016WP40572 265 aa3.82□□□□□ -1.8
CTK1YKL139W AZF1P41696 914 aa3.82□□□□□ -1.8
CTK1YKL139W GUF1P46943 645 aa3.82□□□□□ -1.8
CTK1YKL139W RLI1Q03195 608 aaKnown RBP3.82□□□□□ -1.8
CTK1YKL139W YDR415CQ04033 374 aaPredicted RBP3.82□□□□□ -1.8
CTK1YKL139W COQ11Q05892 277 aa3.82□□□□□ -1.8
CTK1YKL139W SYO1Q07395 620 aa3.82□□□□□ -1.8
CTK1YKL139W NDJ1Q12366 352 aa3.82□□□□□ -1.8
CTK1YKL139W HIS4P00815 799 aaKnown RBP3.81□□□□□ -1.8
CTK1YKL139W NFT1P0CE68 1218 aa3.81□□□□□ -1.8
CTK1YKL139W SCH9P11792 824 aaKnown RBP3.81□□□□□ -1.8
CTK1YKL139W TAL1P15019 335 aaKnown RBP3.81□□□□□ -1.8
CTK1YKL139W EXO70P19658 623 aa3.81□□□□□ -1.8
CTK1YKL139W CRM1P30822 1084 aaKnown RBP3.81□□□□□ -1.8
CTK1YKL139W CUE2P36075 443 aaKnown RBP3.81□□□□□ -1.8
CTK1YKL139W ASN2P49090 572 aaKnown RBP3.81□□□□□ -1.8
CTK1YKL139W IRC15Q02733 499 aa3.81□□□□□ -1.8
CTK1YKL139W TAF12Q03761 539 aa3.81□□□□□ -1.8
CTK1YKL139W MRPL51Q06090 140 aaPredicted RBP3.81□□□□□ -1.8
CTK1YKL139W YLL056CQ12177 298 aa3.81□□□□□ -1.8
CTK1YKL139W CDC21P06785 304 aa3.8□□□□□ -1.8
CTK1YKL139W HNM1P19807 563 aa3.8□□□□□ -1.8
CTK1YKL139W NRP1P32770 719 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
CTK1YKL139W YSC83P32792 385 aa3.8□□□□□ -1.8
CTK1YKL139W YNK1P36010 153 aaKnown RBP3.8□□□□□ -1.8
CTK1YKL139W FRE2P36033 711 aa3.8□□□□□ -1.8
CTK1YKL139W YCR041WP37265 110 aa3.8□□□□□ -1.8
CTK1YKL139W QDR3P38227 689 aa3.8□□□□□ -1.8
CTK1YKL139W SPC97P38863 823 aa3.8□□□□□ -1.8
CTK1YKL139W YPS6P40583 537 aa3.8□□□□□ -1.8
CTK1YKL139W ELP2P42935 788 aa3.8□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms